Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY31528 | Canola | nucleus | 100.0 | 100.0 |
| Bra034639.1-P | Field mustard | nucleus | 98.59 | 98.59 |
| CDX76292 | Canola | nucleus | 98.59 | 98.59 |
| CDX69072 | Canola | nucleus | 88.03 | 81.17 |
| CDX75445 | Canola | nucleus | 87.32 | 80.52 |
| CDX72490 | Canola | nucleus | 84.51 | 78.43 |
| CDY45319 | Canola | nucleus | 84.51 | 78.43 |
| AT4G34590.1 | Thale cress | nucleus | 82.39 | 73.58 |
| Solyc04g080740.1.1 | Tomato | nucleus | 50.7 | 48.98 |
| PGSC0003DMT400009493 | Potato | nucleus | 50.0 | 47.33 |
| KRH15149 | Soybean | nucleus | 52.82 | 45.18 |
| CDY29220 | Canola | nucleus | 47.18 | 43.23 |
| CDY52079 | Canola | nucleus | 47.89 | 43.04 |
| CDY39029 | Canola | nucleus | 47.89 | 43.04 |
| KRH51803 | Soybean | nucleus, plastid | 45.77 | 42.48 |
| KRH61129 | Soybean | nucleus, plastid | 45.07 | 41.83 |
| CDX76636 | Canola | nucleus | 40.85 | 41.13 |
| CDY53277 | Canola | nucleus, plastid | 48.59 | 41.07 |
| CDY30327 | Canola | nucleus, plastid | 47.89 | 40.48 |
| CDY11421 | Canola | nucleus | 40.14 | 40.43 |
| CDY20909 | Canola | nucleus | 47.89 | 40.0 |
| CDY46312 | Canola | nucleus | 47.18 | 39.88 |
| CDX85891 | Canola | nucleus | 49.3 | 39.77 |
| CDY25111 | Canola | nucleus | 37.32 | 39.55 |
| CDX67893 | Canola | nucleus | 37.32 | 39.55 |
| KRH05862 | Soybean | nucleus | 52.82 | 39.06 |
| CDX68131 | Canola | nucleus | 48.59 | 38.55 |
| Os09t0306400-01 | Rice | nucleus | 40.14 | 37.25 |
| EER96530 | Sorghum | nucleus | 40.14 | 35.85 |
| Zm00001d005578_P001 | Maize | nucleus | 40.14 | 33.53 |
| TraesCS5B01G176700.1 | Wheat | nucleus | 35.21 | 32.68 |
| HORVU5Hr1G054510.1 | Barley | nucleus | 35.21 | 32.47 |
| TraesCS5A01G179000.1 | Wheat | nucleus | 35.21 | 32.47 |
| TraesCS5D01G183500.1 | Wheat | nucleus | 35.21 | 32.47 |
| EES14897 | Sorghum | nucleus, plastid | 36.62 | 29.55 |
| Zm00001d030577_P001 | Maize | nucleus | 32.39 | 29.11 |
| Os08t0357300-01 | Rice | cytosol | 21.13 | 26.55 |
| Zm00001d020025_P001 | Maize | endoplasmic reticulum, extracellular | 19.01 | 22.31 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | GO:A0A078H3Z3 | UniProt:A0A078H3Z3 | EnsemblPlants:CDY17470 | ProteinID:CDY17470 |
| ProteinID:CDY17470.1 | ProteinID:CDY31528.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00095647001 |
| InterPro:IPR004827 | PFAM:PF00170 | ScanProsite:PS00036 | PFscan:PS50217 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF229 |
| SMART:SM00338 | SUPFAM:SSF57959 | UniParc:UPI0004EE524C | InterPro:bZIP | SEG:seg | : |
Description
BnaC03g65930DBnaA10g13430D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H3Z3]
Coordinates
chrLK032074:+:36394..37019
Molecular Weight (calculated)
16179.3 Da
IEP (calculated)
4.987
GRAVY (calculated)
-0.625
Length
142 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPSSSGSEE SLMEQRKRKR MLSNRESARR SRMKKQKLLD DLTAQVNRLK EQNNEILTSV SITTQHYLTV EAENSVLKAQ LDELSHRLES LNGIIEFLES
101: TNGICPNPLT GPEPDDFLVN QMNMNMFCMN QPLMASSDAL LY
101: TNGICPNPLT GPEPDDFLVN QMNMNMFCMN QPLMASSDAL LY
001: MESSSSGTTS STIQTSSGSE ESLMEQRKRK RMLSNRESAR RSRMKKQKLL DDLTAQVNHL KKENTEIVTS VSITTQHYLT VEAENSVLRA QLDELNHRLQ
101: SLNDIIEFLD SSNNNNNNNM GMCSNPLVGL ECDDFFVNQM NMSYIMNQPL MASSDALMY
101: SLNDIIEFLD SSNNNNNNNM GMCSNPLVGL ECDDFFVNQM NMSYIMNQPL MASSDALMY
Arabidopsis Description
BZIP11bZIP transcription factor 11 [Source:UniProtKB/Swiss-Prot;Acc:O65683]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.