Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 2
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX68131 | Canola | nucleus | 96.59 | 94.97 |
| AT1G75390.1 | Thale cress | nucleus | 81.25 | 82.66 |
| CDY39029 | Canola | nucleus | 68.75 | 76.58 |
| CDY52079 | Canola | nucleus | 65.91 | 73.42 |
| CDY17470 | Canola | nucleus | 39.77 | 49.3 |
| CDY31528 | Canola | nucleus | 39.77 | 49.3 |
| CDX76292 | Canola | nucleus | 39.77 | 49.3 |
| CDY45319 | Canola | nucleus | 42.05 | 48.37 |
| CDX75445 | Canola | nucleus | 42.05 | 48.05 |
| CDX69072 | Canola | nucleus | 42.05 | 48.05 |
| CDX72490 | Canola | nucleus | 41.48 | 47.71 |
| CDY29220 | Canola | nucleus | 41.48 | 47.1 |
| CDY30327 | Canola | nucleus, plastid | 42.05 | 44.05 |
| CDX76636 | Canola | nucleus | 35.23 | 43.97 |
| CDY20909 | Canola | nucleus | 42.05 | 43.53 |
| CDY53277 | Canola | nucleus, plastid | 41.48 | 43.45 |
| CDY46312 | Canola | nucleus | 41.48 | 43.45 |
| CDX67893 | Canola | nucleus | 32.95 | 43.28 |
| CDY25111 | Canola | nucleus | 32.95 | 43.28 |
| CDY11421 | Canola | nucleus | 34.66 | 43.26 |
| Os09t0306400-01 | Rice | nucleus | 31.25 | 35.95 |
| EER96530 | Sorghum | nucleus | 31.82 | 35.22 |
| HORVU5Hr1G054510.1 | Barley | nucleus | 30.11 | 34.42 |
| TraesCS5B01G176700.1 | Wheat | nucleus | 29.55 | 33.99 |
| TraesCS5A01G179000.1 | Wheat | nucleus | 29.55 | 33.77 |
| TraesCS5D01G183500.1 | Wheat | nucleus | 28.98 | 33.12 |
| Zm00001d005578_P001 | Maize | nucleus | 30.68 | 31.76 |
| EES14897 | Sorghum | nucleus, plastid | 28.41 | 28.41 |
| Zm00001d030577_P001 | Maize | nucleus | 25.0 | 27.85 |
| Os08t0357300-01 | Rice | cytosol | 14.2 | 22.12 |
| Zm00001d020025_P001 | Maize | endoplasmic reticulum, extracellular | 11.93 | 17.36 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | GO:A0A078D9G0 | EnsemblPlants:CDX85891 | ProteinID:CDX85891 | ProteinID:CDX85891.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00143703001 | InterPro:IPR004827 | PFAM:PF00170 |
| ScanProsite:PS00036 | PFscan:PS50217 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF229 | SMART:SM00338 | SUPFAM:SSF57959 |
| UniParc:UPI0004EDF6FB | InterPro:bZIP | SEG:seg | : | : | : |
Description
BnaC06g22430D
Coordinates
chrLK031843:+:596465..597077
Molecular Weight (calculated)
19297.5 Da
IEP (calculated)
5.617
GRAVY (calculated)
-0.593
Length
176 amino acids
Sequence
(BLAST)
(BLAST)
001: MNKTELGSPT SNSSVLTTGL LNSGSESDLQ QRDLLDERKR KRKQSNRESA RRSRMRKQQH LDDLAAQVTH LRKENGHIIA GIAVTTEHYV TIEAENSILR
101: AQLLELNHRL DSLNEIVDFV ESSSFEMETG QGGGLVDYGG GGGGGFYDGG MNTLNLGFYN QPIMASAYTA GDVFNC
101: AQLLELNHRL DSLNEIVDFV ESSSFEMETG QGGGLVDYGG GGGGGFYDGG MNTLNLGFYN QPIMASAYTA GDVFNC
001: MNNKTEMGSS TSGNCSSVST TGLANSGSES DLRQRDLIDE RKRKRKQSNR ESARRSRMRK QKHLDDLTAQ VTHLRKENAQ IVAGIAVTTQ HYVTIEAEND
101: ILRAQVLELN HRLQSLNEIV DFVESSSSGF GMETGQGLFD GGLFDGVMNP MNLGFYNQPI MASASTAGDV FNC
101: ILRAQVLELN HRLQSLNEIV DFVESSSSGF GMETGQGLFD GGLFDGVMNP MNLGFYNQPI MASASTAGDV FNC
Arabidopsis Description
BZIP44bZIP transcription factor 44 [Source:UniProtKB/Swiss-Prot;Acc:C0Z2L5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.