Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY11421 | Canola | nucleus | 99.29 | 99.29 |
| CDY25111 | Canola | nucleus | 85.82 | 90.3 |
| CDX67893 | Canola | nucleus | 85.11 | 89.55 |
| AT3G62420.1 | Thale cress | nucleus | 90.07 | 86.99 |
| GSMUA_Achr11P... | Banana | nucleus | 58.16 | 56.94 |
| GSMUA_Achr8P22330_001 | Banana | nucleus | 55.32 | 54.17 |
| KRH68258 | Soybean | nucleus | 56.74 | 53.33 |
| KRG96525 | Soybean | nucleus | 56.74 | 53.33 |
| GSMUA_Achr11P... | Banana | nucleus | 52.48 | 53.24 |
| Solyc01g079480.2.1 | Tomato | nucleus | 52.48 | 51.39 |
| PGSC0003DMT400018832 | Potato | nucleus | 52.48 | 51.39 |
| Solyc06g009640.1.1 | Tomato | nucleus | 51.06 | 50.0 |
| PGSC0003DMT400088166 | Potato | nucleus | 51.06 | 50.0 |
| GSMUA_Achr8P29960_001 | Banana | nucleus | 51.06 | 50.0 |
| VIT_07s0005g01450.t01 | Wine grape | nucleus | 51.06 | 49.66 |
| KRH69221 | Soybean | nucleus | 51.77 | 48.99 |
| KRH31798 | Soybean | nucleus | 50.35 | 46.71 |
| CDX76292 | Canola | nucleus | 41.13 | 40.85 |
| CDY17470 | Canola | nucleus | 41.13 | 40.85 |
| CDY31528 | Canola | nucleus | 41.13 | 40.85 |
| KRH65972 | Soybean | nucleus | 34.75 | 40.16 |
| CDY29220 | Canola | nucleus | 42.55 | 38.71 |
| CDX75445 | Canola | nucleus | 41.84 | 38.31 |
| CDX69072 | Canola | nucleus | 41.84 | 38.31 |
| CDY30327 | Canola | nucleus, plastid | 45.39 | 38.1 |
| CDY52079 | Canola | nucleus | 42.55 | 37.97 |
| CDY39029 | Canola | nucleus | 42.55 | 37.97 |
| CDY53277 | Canola | nucleus, plastid | 44.68 | 37.5 |
| CDX72490 | Canola | nucleus | 39.01 | 35.95 |
| CDY20909 | Canola | nucleus | 43.26 | 35.88 |
| CDY46312 | Canola | nucleus | 42.55 | 35.71 |
| CDY45319 | Canola | nucleus | 38.3 | 35.29 |
| CDX85891 | Canola | nucleus | 43.97 | 35.23 |
| CDX68131 | Canola | nucleus | 43.97 | 34.64 |
| Os09t0306400-01 | Rice | nucleus | 34.04 | 31.37 |
| HORVU5Hr1G054510.1 | Barley | nucleus | 31.91 | 29.22 |
| TraesCS5A01G179000.1 | Wheat | nucleus | 31.91 | 29.22 |
| TraesCS5D01G183500.1 | Wheat | nucleus | 31.91 | 29.22 |
| EER96530 | Sorghum | nucleus | 32.62 | 28.93 |
| TraesCS5B01G176700.1 | Wheat | nucleus | 31.21 | 28.76 |
| Zm00001d005578_P001 | Maize | nucleus | 31.91 | 26.47 |
| Os08t0357300-01 | Rice | cytosol | 19.15 | 23.89 |
| EES14897 | Sorghum | nucleus, plastid | 29.79 | 23.86 |
| Zm00001d030577_P001 | Maize | nucleus | 24.82 | 22.15 |
| Zm00001d020025_P001 | Maize | endoplasmic reticulum, extracellular | 12.06 | 14.05 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | GO:A0A078CHE1 | EnsemblPlants:CDX76636 | ProteinID:CDX76636 | ProteinID:CDX76636.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00127101001 | InterPro:IPR004827 | PFAM:PF00170 |
| ScanProsite:PS00036 | PFscan:PS50217 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF167 | SMART:SM00338 | SUPFAM:SSF57959 |
| UniParc:UPI0004EF287F | InterPro:bZIP | : | : | : | : |
Description
BnaC08g32220D
Coordinates
chrLK031808:-:268298..268723
Molecular Weight (calculated)
16146.2 Da
IEP (calculated)
5.364
GRAVY (calculated)
-0.806
Length
141 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSLQRQTSP DSDNDPRYAA VTDERKRKRM ISNRESARRS RMRKQKQLGD LINEVTVLKN DNAKITEQVD AATRKYVEME SRNDVLRAQA SELTERLRSL
101: NSVLEMVEEI SGQALDIPEI NPWQVSCPMQ PIMASADMFD C
101: NSVLEMVEEI SGQALDIPEI NPWQVSCPMQ PIMASADMFD C
001: MGSLQMQTSP ESDNDPRYAT VTDERKRKRM ISNRESARRS RMRKQKQLGD LINEVTLLKN DNAKITEQVD EASKKYIEME SKNNVLRAQA SELTDRLRSL
101: NSVLEMVEEI SGQALDIPEI PESMQNPWQM PCPMQPIRAS ADMFDC
101: NSVLEMVEEI SGQALDIPEI PESMQNPWQM PCPMQPIRAS ADMFDC
Arabidopsis Description
BZIP53bZIP transcription factor 53 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZP8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.