Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX88132 | Canola | nucleus | 89.21 | 89.21 |
| Bra009793.1-P | Field mustard | nucleus | 87.41 | 83.51 |
| CDY05458 | Canola | nucleus | 78.42 | 78.42 |
| CDY05397 | Canola | nucleus | 77.7 | 77.7 |
| AT5G24800.1 | Thale cress | nucleus | 75.18 | 75.45 |
| KRH16196 | Soybean | cytosol, nucleus | 19.78 | 36.42 |
| GSMUA_Achr1P23640_001 | Banana | nucleus | 32.73 | 36.26 |
| KRH61976 | Soybean | nucleus | 37.41 | 34.67 |
| Zm00001d050588_P002 | Maize | nucleus | 28.06 | 34.36 |
| TraesCS7B01G391800.1 | Wheat | nucleus | 30.58 | 34.27 |
| KRH52637 | Soybean | nucleus | 35.25 | 34.03 |
| VIT_04s0008g02750.t01 | Wine grape | nucleus | 42.45 | 33.81 |
| TraesCS7D01G475100.1 | Wheat | nucleus | 29.14 | 32.79 |
| TraesCS7A01G488600.2 | Wheat | nucleus | 29.5 | 32.67 |
| Zm00001d003529_P001 | Maize | cytosol | 15.11 | 32.56 |
| Zm00001d046937_P001 | Maize | nucleus | 30.94 | 30.5 |
| Os02t0175100-01 | Rice | mitochondrion, nucleus | 29.14 | 29.24 |
| Os06t0662200-01 | Rice | nucleus | 30.94 | 29.15 |
| Os02t0266800-01 | Rice | nucleus | 30.58 | 28.52 |
| EER90165 | Sorghum | nucleus | 29.14 | 28.22 |
| KXG29589 | Sorghum | nucleus | 32.37 | 28.12 |
| PGSC0003DMT400038493 | Potato | nucleus | 34.53 | 27.51 |
| Zm00001d015421_P001 | Maize | nucleus | 32.73 | 27.49 |
| TraesCS6B01G182500.5 | Wheat | nucleus | 30.58 | 27.16 |
| TraesCS6A01G154600.2 | Wheat | nucleus | 30.58 | 27.07 |
| KRH04810 | Soybean | nucleus | 30.94 | 26.96 |
| Solyc08g006110.2.1 | Tomato | nucleus | 33.81 | 26.78 |
| TraesCS6D01G144400.2 | Wheat | nucleus | 29.5 | 26.2 |
| GSMUA_Achr1P15640_001 | Banana | nucleus | 32.37 | 26.09 |
| CDY05606 | Canola | nucleus | 29.86 | 26.02 |
| CDX86210 | Canola | nucleus | 29.14 | 25.8 |
| CDY48665 | Canola | nucleus | 29.14 | 25.47 |
| CDY33887 | Canola | nucleus | 28.42 | 25.08 |
| CDY14423 | Canola | nucleus | 31.3 | 23.39 |
| CDY07692 | Canola | nucleus | 31.3 | 23.32 |
| CDY55832 | Canola | nucleus | 26.26 | 23.17 |
| CDX73466 | Canola | nucleus | 28.42 | 20.9 |
| CDX78251 | Canola | nucleus | 26.98 | 19.53 |
| CDY21903 | Canola | nucleus | 26.98 | 19.04 |
| CDY22069 | Canola | nucleus | 26.98 | 18.99 |
| HORVU6Hr1G031330.2 | Barley | nucleus | 15.11 | 14.63 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | MapMan:15.5.4.2 | GO:A0A078CWR6 | InterPro:Basic_leucine-zipper_C | EnsemblPlants:CDX80469 |
| ProteinID:CDX80469 | ProteinID:CDX80469.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00133555001 |
| InterPro:IPR004827 | PFAM:PF00170 | PFAM:PF12498 | ScanProsite:PS00036 | PFscan:PS50217 | PANTHER:PTHR22952 |
| PANTHER:PTHR22952:SF113 | SMART:SM00338 | SUPFAM:SSF57959 | UniParc:UPI0004EEC367 | InterPro:bZIP | SEG:seg |
Description
BnaC07g29750D
Coordinates
chrLK031821:+:707376..708639
Molecular Weight (calculated)
30497.6 Da
IEP (calculated)
6.682
GRAVY (calculated)
-0.689
Length
278 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGHTAKDTG MKRSASELAL QEYLTKVIPL DPSFDPMNQD HTGELRDRHL LSESLIPAGV LLDAQSSICE NLSADSPVSA NKPDVRRRAR RTASVSSHGH
101: SDEEDAETEA GQSEMTNDPN HLKRMRRMHS NRESARRSRR RKQEQLADLE SQVDSLKGEN TTLYKQLIDA TQLFRSAGTN NRILKSDVET LRIKVKLAED
201: LVARGSLTSS LNQLLQTHLS PSPQSINSLH YTGSTSPAVT VHSDQSMFPG ITLSGQNSSP GLGNVSSEAV SCVSDIWP
101: SDEEDAETEA GQSEMTNDPN HLKRMRRMHS NRESARRSRR RKQEQLADLE SQVDSLKGEN TTLYKQLIDA TQLFRSAGTN NRILKSDVET LRIKVKLAED
201: LVARGSLTSS LNQLLQTHLS PSPQSINSLH YTGSTSPAVT VHSDQSMFPG ITLSGQNSSP GLGNVSSEAV SCVSDIWP
001: MDNHTAKDIG MKRSASELAL QEYLTTSPLD PCFDLMNRDY TCELRDSLLW SEGLFPAGPF RDAQSSICEN LSADSPVSAN KPEVRGGVRR TTSGSSHVNS
101: DDEDAETEAG QSEMTNDPND LKRIRRMNSN RESAKRSRRR KQEYLVDLET QVDSLKGDNS TLYKQLIDAT QQFRSAGTNN RVLKSDVETL RVKVKLAEDL
201: VARGSLTSSL NQLLQTHLSP PSHSISSLHY TGNTSPAITV HSDQSLFPGM TLSGQNSSPG LGNVSSEAVS CVSDIWP
101: DDEDAETEAG QSEMTNDPND LKRIRRMNSN RESAKRSRRR KQEYLVDLET QVDSLKGDNS TLYKQLIDAT QQFRSAGTNN RVLKSDVETL RVKVKLAEDL
201: VARGSLTSSL NQLLQTHLSP PSHSISSLHY TGNTSPAITV HSDQSLFPGM TLSGQNSSPG LGNVSSEAVS CVSDIWP
Arabidopsis Description
BZIP9Basic leucine zipper 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9FUD3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.