Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX73466 | Canola | nucleus | 54.92 | 45.77 |
| CDX78251 | Canola | nucleus | 53.65 | 44.01 |
| AT3G54620.1 | Thale cress | nucleus | 55.87 | 43.67 |
| GSMUA_Achr10P... | Banana | nucleus | 25.4 | 36.04 |
| GSMUA_Achr7P07650_001 | Banana | nucleus | 24.44 | 33.92 |
| CDY07692 | Canola | nucleus | 39.05 | 32.98 |
| Zm00001d034455_P001 | Maize | nucleus | 29.21 | 32.74 |
| CDY14423 | Canola | nucleus | 38.1 | 32.26 |
| Zm00001d034447_P001 | Maize | nucleus | 26.35 | 30.63 |
| CDY21903 | Canola | nucleus | 38.1 | 30.46 |
| CDY22069 | Canola | nucleus | 37.14 | 29.62 |
| CDY33887 | Canola | nucleus | 27.94 | 27.94 |
| CDX86210 | Canola | nucleus | 27.3 | 27.39 |
| CDY05606 | Canola | nucleus | 27.62 | 27.27 |
| CDY48665 | Canola | nucleus | 27.3 | 27.04 |
| CDX80469 | Canola | nucleus | 23.17 | 26.26 |
| TraesCS5D01G068800.1 | Wheat | nucleus | 24.76 | 26.17 |
| CDY05397 | Canola | nucleus | 22.86 | 25.9 |
| CDX88132 | Canola | nucleus | 22.86 | 25.9 |
| CDY05458 | Canola | nucleus | 22.54 | 25.54 |
| TraesCS5A01G057500.2 | Wheat | nucleus | 23.81 | 25.17 |
| TraesCS5B01G059200.1 | Wheat | nucleus | 23.49 | 24.83 |
| GSMUA_Achr4P28530_001 | Banana | nucleus | 33.33 | 24.76 |
| Zm00001d034457_P003 | Maize | nucleus | 31.75 | 24.45 |
| EER90738 | Sorghum | nucleus | 31.43 | 24.44 |
| Os12t0601800-01 | Rice | nucleus | 20.32 | 23.97 |
| GSMUA_Achr2P12610_001 | Banana | nucleus | 30.79 | 23.54 |
| TraesCS5A01G440400.1 | Wheat | nucleus | 28.89 | 23.21 |
| TraesCS5D01G447500.1 | Wheat | nucleus | 29.84 | 23.15 |
| TraesCS5B01G444100.2 | Wheat | nucleus | 29.21 | 23.0 |
| Os03t0796900-01 | Rice | nucleus | 30.79 | 22.82 |
| EES16316 | Sorghum | nucleus | 22.22 | 22.08 |
| HORVU5Hr1G014170.10 | Barley | nucleus, plastid | 25.08 | 21.29 |
| Zm00001d030995_P002 | Maize | nucleus | 20.95 | 21.29 |
| Zm00001d013074_P003 | Maize | cytosol | 29.52 | 21.23 |
| Os07t0182000-01 | Rice | nucleus | 29.21 | 21.1 |
| HORVU5Hr1G106120.3 | Barley | nucleus | 29.84 | 19.71 |
| KXG34539 | Sorghum | nucleus | 25.08 | 19.55 |
| Zm00001d018971_P003 | Maize | nucleus | 26.67 | 18.42 |
| EER95953 | Sorghum | nucleus | 25.4 | 17.98 |
| TraesCS1D01G332200.1 | Wheat | nucleus | 21.27 | 16.63 |
| HORVU1Hr1G077530.1 | Barley | nucleus | 20.63 | 15.89 |
| TraesCS1B01G343500.1 | Wheat | nucleus | 20.63 | 15.89 |
| TraesCS1A01G329900.1 | Wheat | nucleus | 15.87 | 13.66 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | MapMan:15.5.4.2 | GO:A0A078IW33 | UniProt:A0A078IW33 | InterPro:Basic_leucine-zipper_C |
| EnsemblPlants:CDY55832 | ProteinID:CDY55832 | ProteinID:CDY55832.1 | ncoils:Coil | GO:GO:0000003 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009791 |
| GO:GO:0009987 | GO:GO:0045893 | GO:GO:0046982 | GO:GO:2000693 | EnsemblPlantsGene:GSBRNA2T00017381001 | InterPro:IPR004827 |
| PFAM:PF00170 | PFAM:PF12498 | ScanProsite:PS00036 | PFscan:PS50217 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF240 |
| SMART:SM00338 | SUPFAM:SSF57959 | UniParc:UPI0004EE3326 | InterPro:bZIP | SEG:seg | : |
Description
BnaCnng29250DBnaCnng29250D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IW33]
Coordinates
chrLK033432:+:21941..24382
Molecular Weight (calculated)
34954.6 Da
IEP (calculated)
9.276
GRAVY (calculated)
-0.936
Length
315 amino acids
Sequence
(BLAST)
(BLAST)
001: MTRSQSEWAF QRLLKENSGS DQTNAIDRLS PPVQSLSTVD ETGDVVEIQK PPRNHQGSRK QQARSCLRRR VGTVEPEDSS ASSSVNQNQS QPPQGSVVAQ
101: TSPGASSVRS VPSTSIQKKL DVPARQATSI SSRDDSDDDD LDGDADNGDP TDVKRARRML SNRESARRSR RRKQEQMNEF DTQVGQLRGE HSTLLSRLSD
201: MNHKCDAAAV DNRILRADIE TLRTKVKMVE ETVKRVTGVN PLHWARPNMG TPLNNTPIDS SRILPNSNHM LEPAIPSTTN AGLASNQRVE RANLLLEQVN
301: REGMQNQFAI NPNLY
101: TSPGASSVRS VPSTSIQKKL DVPARQATSI SSRDDSDDDD LDGDADNGDP TDVKRARRML SNRESARRSR RRKQEQMNEF DTQVGQLRGE HSTLLSRLSD
201: MNHKCDAAAV DNRILRADIE TLRTKVKMVE ETVKRVTGVN PLHWARPNMG TPLNNTPIDS SRILPNSNHM LEPAIPSTTN AGLASNQRVE RANLLLEQVN
301: REGMQNQFAI NPNLY
001: MHIVFSVDDL TESFWPVPAP APSPGSSSTP SPTQNVADGM TRSQSEWAFH RLINELSGSD SSPTTNTIER SPPPVQSLSR LEETVDETED VVEIQKPQNH
101: RRLPVDDQGK NRNRAPSSDP VDSSAPVVVD PNQYHAILKS KLELACAAVA RRVGTVKPED SSASASNQKQ AQGSIVAQTS PGASSVRFSP TTSTQKKPDV
201: PARQTSISSR DDSDDDDLDG DADNGDPTDV KRARRMLSNR ESARRSRRRK QEQMNEFDTQ VGQLRAEHST LINRLSDMNH KYDAAAVDNR ILRADIETLR
301: TKVKMAEETV KRVTGVNPLH WSRPNMGIPF SNTPSASSSI PPNSNHILKP ANSSTNTSAG LAQNQRVETA NFLPEQVNRE GMQNPFAPDS NLYETLPHWN
401: HKH
101: RRLPVDDQGK NRNRAPSSDP VDSSAPVVVD PNQYHAILKS KLELACAAVA RRVGTVKPED SSASASNQKQ AQGSIVAQTS PGASSVRFSP TTSTQKKPDV
201: PARQTSISSR DDSDDDDLDG DADNGDPTDV KRARRMLSNR ESARRSRRRK QEQMNEFDTQ VGQLRAEHST LINRLSDMNH KYDAAAVDNR ILRADIETLR
301: TKVKMAEETV KRVTGVNPLH WSRPNMGIPF SNTPSASSSI PPNSNHILKP ANSSTNTSAG LAQNQRVETA NFLPEQVNRE GMQNPFAPDS NLYETLPHWN
401: HKH
Arabidopsis Description
BZIP25Basic leucine zipper 25 [Source:UniProtKB/Swiss-Prot;Acc:Q9M1G6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.