Factsheet for GSMUA_Achr10P08670_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr11P...
GSMUA_Achr11P...
GSMUA_Achr1P15640_001
GSMUA_Achr1P23640_001
GSMUA_Achr2P12610_001
GSMUA_Achr4P28530_001
GSMUA_Achr7P07650_001
GSMUA_Achr7P23040_001
GSMUA_Achr8P22330_001
GSMUA_Achr8P29960_001
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G54620.1	GSMUA_Achr7P23040_001	AT3G24650.1	12657652
AT3G54620.1	GSMUA_AchrUn_...	AT3G24650.1	12657652
AT3G54620.1	GSMUA_Achr10P...	AT3G54620.1	16709202
AT3G54620.1	GSMUA_Achr2P12610_001	AT3G54620.1	16709202
AT3G54620.1	GSMUA_Achr4P28530_001	AT3G54620.1	16709202
AT3G54620.1	GSMUA_Achr7P07650_001	AT3G54620.1	16709202
AT3G54620.1	GSMUA_Achr11P...	AT3G62420.1	16709202
AT3G54620.1	GSMUA_Achr11P...	AT3G62420.1	16709202
AT3G54620.1	GSMUA_Achr8P22330_001	AT3G62420.1	16709202
AT3G54620.1	GSMUA_Achr8P29960_001	AT3G62420.1	16709202
AT3G54620.1	GSMUA_Achr11P...	AT3G62420.1	16810321
AT3G54620.1	GSMUA_Achr11P...	AT3G62420.1	16810321
AT3G54620.1	GSMUA_Achr8P22330_001	AT3G62420.1	16810321
AT3G54620.1	GSMUA_Achr8P29960_001	AT3G62420.1	16810321
AT3G54620.1	GSMUA_Achr1P15640_001	AT5G24800.1	16709202
AT3G54620.1	GSMUA_Achr1P23640_001	AT5G24800.1	16709202

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g022080.2.1	Tomato	mitochondrion, nucleus	36.49	57.45
GSMUA_Achr7P07650_001	Banana	nucleus	49.1	48.02
KRG89569	Soybean	nucleus	33.33	34.42
CDY05606	Canola	nucleus	48.65	33.86
Bra010010.1-P	Field mustard	nucleus	47.3	33.44
CDX86210	Canola	nucleus	47.3	33.44
CDY48665	Canola	nucleus	47.3	33.02
Bra020620.1-P	Field mustard	nucleus	46.4	32.7
CDY33887	Canola	nucleus	45.95	32.38
AT5G28770.2	Thale cress	nucleus	45.5	32.17
Os12t0601800-01	Rice	nucleus	37.84	31.46
TraesCS5A01G057500.2	Wheat	nucleus	41.89	31.21
GSMUA_Achr4P28530_001	Banana	nucleus	59.46	31.13
Zm00001d030995_P002	Maize	nucleus	41.89	30.0
GSMUA_Achr1P23640_001	Banana	nucleus	33.78	29.88
TraesCS5B01G059200.1	Wheat	nucleus	39.64	29.53
TraesCS5D01G068800.1	Wheat	nucleus	39.19	29.19
EES16316	Sorghum	nucleus	41.44	29.02
GSMUA_Achr2P12610_001	Banana	nucleus	53.15	28.64
PGSC0003DMT400050096	Potato	nucleus	57.21	28.16
Solyc01g097330.2.1	Tomato	nucleus	57.21	27.97
CDY55832	Canola	nucleus	36.04	25.4
HORVU5Hr1G014170.10	Barley	nucleus, plastid	40.09	23.99
CDX78251	Canola	nucleus	38.29	22.14
Bra007083.1-P	Field mustard	nucleus	38.29	22.14
Bra000102.1-P	Field mustard	nucleus	36.04	21.86
CDY14423	Canola	nucleus	36.49	21.77
CDX73466	Canola	nucleus	36.94	21.69
GSMUA_Achr1P15640_001	Banana	nucleus	33.33	21.45
CDY21903	Canola	nucleus	37.84	21.32
CDY07692	Canola	nucleus	35.59	21.18
AT4G02640.2	Thale cress	nucleus	39.64	21.1
Bra036251.1-P	Field mustard	nucleus	37.39	21.07
CDY22069	Canola	nucleus	37.39	21.01
AT3G54620.1	Thale cress	nucleus	37.84	20.84

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	MapMan:15.5.4.2	InterPro:Basic_leucine-zipper_C	ncoils:Coil	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0006139	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr10G08670_001	EnsemblPlants:GSMUA_Achr10P08670_001
EnsemblPlants:GSMUA_Achr10T08670_001	InterPro:IPR004827	UniProt:M0RGJ3	PFAM:PF00170	PFAM:PF12498	ScanProsite:PS00036
PFscan:PS50217	PANTHER:PTHR22952	PANTHER:PTHR22952:SF348	SMART:SM00338	SUPFAM:SSF57959	UniParc:UPI000296B157
InterPro:bZIP	SEG:seg	:	:	:	:

Description

bZIP transcription factor domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr10G08670_001]

Coordinates

chr10:+:18551938..18557090

Molecular Weight (calculated)

24100.1 Da

IEP (calculated)

8.070

GRAVY (calculated)

-0.768

Length

222 amino acids

Sequence
(BLAST)

001: MQNSGVQGRP ATSGSSREYS DEDEADGEAE TRENMDPTDV KRLRRMISNR ESARRSRRRK QAHLSELEAQ VAQLRVENSS LLKRLADINQ KYNEAAVDNR
101: VLKADVETLR AKVKMAEDSV KQLTGINPLN PTISDMSARS IPFSGSPSDA SDASIASVTP VDVVHGAVAG GKMGRTASMQ RVASLEHLQK KICGGGQNSC
201: ISAQCDSTWD PESSVNNKQN QA

Best Arabidopsis Sequence Match ( AT5G28770.1 )
(BLAST)

001: MEKVFSDEEI SGNHHWSVNG MTSLNRSASE WAFNRFIQES SAAADDGEST TACGVSVSSP PNVPVDSEEY RAFLKSKLNL ACAAVAMKRD TSGRSDNGGA
101: NESEQASLAS SKATPMMSSA ITSGSELSGD EEEADGETNM NPTNVKRVKR MLSNRESARR SRRRKQAHLS ELETQVSQLR VENSKLMKGL TDVTQTFNDA
201: SVENRVLKAN IETLRAKVKM AEETVKRLTG FNPMFHNMPQ IVSTVSLPSE TSNSPDTTSS QVTTPEIISS GNKGKALIGC KMNRTASMRR VESLEHLQKR
301: IRSVGDQ

Arabidopsis Description

BZIP63Basic leucine zipper 63 [Source:UniProtKB/Swiss-Prot;Acc:B9DGI8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.