Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G059200.1 | Wheat | nucleus | 82.55 | 82.55 |
| TraesCS5A01G057500.2 | Wheat | nucleus | 82.21 | 82.21 |
| HORVU5Hr1G014170.10 | Barley | nucleus, plastid | 75.84 | 60.92 |
| Zm00001d030995_P002 | Maize | nucleus | 47.65 | 45.81 |
| EES16316 | Sorghum | nucleus | 47.99 | 45.11 |
| Solyc08g022080.2.1 | Tomato | mitochondrion, nucleus | 21.14 | 44.68 |
| Os12t0601800-01 | Rice | nucleus | 39.93 | 44.57 |
| GSMUA_Achr10P... | Banana | nucleus | 29.19 | 39.19 |
| AT5G28770.2 | Thale cress | nucleus | 33.56 | 31.85 |
| CDX86210 | Canola | nucleus | 31.88 | 30.25 |
| CDY48665 | Canola | nucleus | 32.21 | 30.19 |
| Bra020620.1-P | Field mustard | nucleus | 31.88 | 30.16 |
| CDY05606 | Canola | nucleus | 32.21 | 30.09 |
| Bra010010.1-P | Field mustard | nucleus | 31.54 | 29.94 |
| CDY33887 | Canola | nucleus | 31.54 | 29.84 |
| KRG89569 | Soybean | nucleus | 20.47 | 28.37 |
| PGSC0003DMT400050096 | Potato | nucleus | 40.27 | 26.61 |
| Solyc01g097330.2.1 | Tomato | nucleus | 39.93 | 26.21 |
| CDX78251 | Canola | nucleus | 32.55 | 25.26 |
| CDX73466 | Canola | nucleus | 31.54 | 24.87 |
| Bra000102.1-P | Field mustard | nucleus | 30.54 | 24.86 |
| CDY55832 | Canola | nucleus | 26.17 | 24.76 |
| Bra007083.1-P | Field mustard | nucleus | 31.54 | 24.48 |
| CDY07692 | Canola | nucleus | 30.2 | 24.13 |
| TraesCS5D01G447500.1 | Wheat | nucleus | 32.55 | 23.89 |
| AT3G54620.1 | Thale cress | nucleus | 31.88 | 23.57 |
| CDY14423 | Canola | nucleus | 28.19 | 22.58 |
| TraesCS6D01G144400.2 | Wheat | nucleus | 23.49 | 22.36 |
| Bra036251.1-P | Field mustard | nucleus | 29.19 | 22.08 |
| CDY21903 | Canola | nucleus | 29.19 | 22.08 |
| CDY22069 | Canola | nucleus | 28.19 | 21.27 |
| AT4G02640.2 | Thale cress | nucleus | 28.19 | 20.14 |
| TraesCS7D01G475100.1 | Wheat | nucleus | 15.77 | 19.03 |
| TraesCS1D01G332200.1 | Wheat | nucleus | 23.83 | 17.62 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | MapMan:15.5.4.2 | InterPro:Basic_leucine-zipper_C | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0003700 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:IPR004827 | PFAM:PF00170 | PFAM:PF12498 | ScanProsite:PS00036 | PFscan:PS50217 |
| PANTHER:PTHR22952 | PANTHER:PTHR22952:SF165 | SMART:SM00338 | SUPFAM:SSF57959 | EnsemblPlantsGene:TraesCS5D01G068800 | EnsemblPlants:TraesCS5D01G068800.1 |
| InterPro:bZIP | TIGR:cd14702 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr5D:-:65759457..65763946
Molecular Weight (calculated)
32537.0 Da
IEP (calculated)
5.141
GRAVY (calculated)
-0.641
Length
298 amino acids
Sequence
(BLAST)
(BLAST)
001: MECSGDEVVE LNCARAGGDP GEYAAVLKRK LQLYCAAVAK TMEGKPQESS LNCLSSQASD TSPLVSQASF DCDGTVVQGK PANSCTSKEQ SDDDDGDLEE
101: NTDPASAKRV KRMLSNRESA RRSRKRKQAH QNDIESQVTQ LRAENASLLK RLTDMTQKYK EASLGNRNLT VDIETMRRKV NIAEEAVRRV TGASLMFSTT
201: SNNVPLASCV SVAASADAVP SEENMSHFLQ GLLEDDLIKH DVSEVATPLP NGEEMASRPA SLRRVASLEN LQKRIHRDSV HSEDMSIFPD HEVPANAQ
101: NTDPASAKRV KRMLSNRESA RRSRKRKQAH QNDIESQVTQ LRAENASLLK RLTDMTQKYK EASLGNRNLT VDIETMRRKV NIAEEAVRRV TGASLMFSTT
201: SNNVPLASCV SVAASADAVP SEENMSHFLQ GLLEDDLIKH DVSEVATPLP NGEEMASRPA SLRRVASLEN LQKRIHRDSV HSEDMSIFPD HEVPANAQ
001: MEKVFSDEEI SGNHHWSVNG MTSLNRSASE WAFNRFIQES SAAADDGEST TACGVSVSSP PNVPVDSEEY RAFLKSKLNL ACAAVAMKRG TFIKPQDTSG
101: RSDNGGANES EQASLASSKA TPMMSSAITS GSELSGDEEE ADGETNMNPT NVKRVKRMLS NRESARRSRR RKQAHLSELE TQVSQLRVEN SKLMKGLTDV
201: TQTFNDASVE NRVLKANIET LRAKVKMAEE TVKRLTGFNP MFHNMPQIVS TVSLPSETSN SPDTTSSQVT TPEIISSGNK GKALIGCKMN RTASMRRVES
301: LEHLQKRIRS VGDQ
101: RSDNGGANES EQASLASSKA TPMMSSAITS GSELSGDEEE ADGETNMNPT NVKRVKRMLS NRESARRSRR RKQAHLSELE TQVSQLRVEN SKLMKGLTDV
201: TQTFNDASVE NRVLKANIET LRAKVKMAEE TVKRLTGFNP MFHNMPQIVS TVSLPSETSN SPDTTSSQVT TPEIISSGNK GKALIGCKMN RTASMRRVES
301: LEHLQKRIRS VGDQ
Arabidopsis Description
BZIP63Basic leucine zipper 63 [Source:UniProtKB/Swiss-Prot;Acc:B9DGI8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.