Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G332200.1 | Wheat | nucleus | 79.95 | 81.14 |
| TraesCS1A01G329900.1 | Wheat | nucleus | 71.15 | 79.51 |
| HORVU1Hr1G077530.1 | Barley | nucleus | 67.24 | 67.24 |
| Solyc08g022080.2.1 | Tomato | mitochondrion, nucleus | 14.91 | 43.26 |
| TraesCS5B01G444100.2 | Wheat | nucleus | 31.05 | 31.75 |
| AT5G28770.2 | Thale cress | nucleus | 23.72 | 30.89 |
| Bra010010.1-P | Field mustard | nucleus | 23.23 | 30.25 |
| CDX86210 | Canola | nucleus | 22.98 | 29.94 |
| CDY33887 | Canola | nucleus | 22.74 | 29.52 |
| Bra020620.1-P | Field mustard | nucleus | 22.74 | 29.52 |
| CDY05606 | Canola | nucleus | 22.74 | 29.15 |
| CDY48665 | Canola | nucleus | 22.49 | 28.93 |
| Os07t0182000-01 | Rice | nucleus | 30.81 | 28.9 |
| KRG89569 | Soybean | nucleus | 14.18 | 26.98 |
| KXG34539 | Sorghum | nucleus | 25.43 | 25.74 |
| EER95953 | Sorghum | nucleus | 27.63 | 25.39 |
| TraesCS5B01G059200.1 | Wheat | nucleus | 18.09 | 24.83 |
| Zm00001d018971_P003 | Maize | nucleus | 27.38 | 24.56 |
| PGSC0003DMT400050096 | Potato | nucleus | 26.65 | 24.17 |
| Solyc01g097330.2.1 | Tomato | nucleus | 26.65 | 24.01 |
| CDX73466 | Canola | nucleus | 21.27 | 23.02 |
| CDX78251 | Canola | nucleus | 21.52 | 22.92 |
| Bra007083.1-P | Field mustard | nucleus | 21.27 | 22.66 |
| Bra036251.1-P | Field mustard | nucleus | 21.27 | 22.08 |
| CDY22069 | Canola | nucleus | 21.27 | 22.03 |
| AT4G02640.2 | Thale cress | nucleus | 22.25 | 21.82 |
| CDY21903 | Canola | nucleus | 20.78 | 21.57 |
| AT3G54620.1 | Thale cress | nucleus | 20.78 | 21.09 |
| TraesCS7B01G391800.1 | Wheat | nucleus | 12.71 | 20.97 |
| CDY14423 | Canola | nucleus | 18.83 | 20.7 |
| CDY07692 | Canola | nucleus | 18.83 | 20.64 |
| CDY55832 | Canola | nucleus | 15.89 | 20.63 |
| Bra000102.1-P | Field mustard | nucleus | 18.09 | 20.22 |
| TraesCS6B01G182500.5 | Wheat | nucleus | 15.4 | 20.13 |
| VIT_00s1609g00010.t01 | Wine grape | cytosol | 2.93 | 8.33 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | MapMan:15.5.4.2 | InterPro:Basic_leucine-zipper_C | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005975 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0010581 | GO:GO:0043565 | GO:GO:0045893 |
| InterPro:IPR004827 | PFAM:PF00170 | PFAM:PF12498 | PFscan:PS50217 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF90 |
| SMART:SM00338 | SUPFAM:SSF57959 | EnsemblPlantsGene:TraesCS1B01G343500 | EnsemblPlants:TraesCS1B01G343500.1 | InterPro:bZIP | SEG:seg |
Description
No Description!
Coordinates
chr1B:-:571707251..571711434
Molecular Weight (calculated)
44437.4 Da
IEP (calculated)
5.253
GRAVY (calculated)
-0.458
Length
409 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPVFFSLEE AMPEPDSNPC RTSSPPLEAH MLVAGLGGVG AGEVVGGCAT NECATEWCFQ KFVDEPWLLN VPTAPVANPE ASTLYPNPTA EGSRKRPYDV
101: HEMVGPEEVI PTPPAASPVV DPVAYNAMLR RKLDAHLAAV AMLRTTRGIC PQSSHDNGAS QNSDSIQGSE NHTGDVSLHQ LSSSSLEPSP SDGDMEGEAQ
201: TIGTMHISAE KANKRKESNR DSARRSRSRK AAHAKELEEQ VSLLRVANNS LMRHLADVSH RYVNISIDNR VLKANVETLE AKVKMAEETM KRVTCTNNFP
301: QAMSSISSLG IPFSGSPLNG ICDNPLPTQN TSLNYLPPTT TNFDVNNNYI PEPALAFQIQ DQIPSLHMQP MSCLDHHPQR MHIGIPTSAP TPQRESTTLD
401: STEIVNMVM
101: HEMVGPEEVI PTPPAASPVV DPVAYNAMLR RKLDAHLAAV AMLRTTRGIC PQSSHDNGAS QNSDSIQGSE NHTGDVSLHQ LSSSSLEPSP SDGDMEGEAQ
201: TIGTMHISAE KANKRKESNR DSARRSRSRK AAHAKELEEQ VSLLRVANNS LMRHLADVSH RYVNISIDNR VLKANVETLE AKVKMAEETM KRVTCTNNFP
301: QAMSSISSLG IPFSGSPLNG ICDNPLPTQN TSLNYLPPTT TNFDVNNNYI PEPALAFQIQ DQIPSLHMQP MSCLDHHPQR MHIGIPTSAP TPQRESTTLD
401: STEIVNMVM
001: MEKVFSDEEI SGNHHWSVNG MTSLNRSASE WAFNRFIQES SAAADDGEST TACGVSVSSP PNVPVDSEEY RAFLKSKLNL ACAAVAMKRD TSGRSDNGGA
101: NESEQASLAS SKATPMMSSA ITSGSELSGD EEEADGETNM NPTNVKRVKR MLSNRESARR SRRRKQAHLS ELETQVSQLR VENSKLMKGL TDVTQTFNDA
201: SVENRVLKAN IETLRAKVKM AEETVKRLTG FNPMFHNMPQ IVSTVSLPSE TSNSPDTTSS QVTTPEIISS GNKGKALIGC KMNRTASMRR VESLEHLQKR
301: IRSVGDQ
101: NESEQASLAS SKATPMMSSA ITSGSELSGD EEEADGETNM NPTNVKRVKR MLSNRESARR SRRRKQAHLS ELETQVSQLR VENSKLMKGL TDVTQTFNDA
201: SVENRVLKAN IETLRAKVKM AEETVKRLTG FNPMFHNMPQ IVSTVSLPSE TSNSPDTTSS QVTTPEIISS GNKGKALIGC KMNRTASMRR VESLEHLQKR
301: IRSVGDQ
Arabidopsis Description
BZIP63Basic leucine zipper 63 [Source:UniProtKB/Swiss-Prot;Acc:B9DGI8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.