CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
EER90165
EER90738
EER95953
EER96530
EES04085
EES14897
EES16316
KXG29589
KXG34539
OQU89229

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G54620.1	EER96530	AT1G75390.1	16709202
AT3G54620.1	EES14897	AT1G75390.1	16709202
AT3G54620.1	EER96530	AT2G18160.1	16709202
AT3G54620.1	EES14897	AT2G18160.1	16709202
AT3G54620.1	EES04085	AT3G24650.1	12657652
AT3G54620.1	OQU89229	AT3G24650.1	12657652
AT3G54620.1	EER90738	AT3G54620.1	16709202
AT3G54620.1	EER95953	AT3G54620.1	16709202
AT3G54620.1	EES16316	AT3G54620.1	16709202
AT3G54620.1	KXG34539	AT3G54620.1	16709202
AT3G54620.1	EER96530	AT3G62420.1	16709202
AT3G54620.1	EES14897	AT3G62420.1	16709202
AT3G54620.1	EER96530	AT3G62420.1	16810321
AT3G54620.1	EES14897	AT3G62420.1	16810321
AT3G54620.1	EER96530	AT4G34590.1	16709202
AT3G54620.1	EES14897	AT4G34590.1	16709202
AT3G54620.1	EER90165	AT5G24800.1	16709202
AT3G54620.1	KXG29589	AT5G24800.1	16709202

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER95953	Sorghum	nucleus	80.94	73.48
Zm00001d018971_P003	Maize	nucleus	50.25	44.52
Solyc08g022080.2.1	Tomato	mitochondrion, nucleus	14.36	41.13
EER90738	Sorghum	nucleus	34.65	34.57
Bra010010.1-P	Field mustard	nucleus	22.77	29.3
CDX86210	Canola	nucleus	22.77	29.3
AT5G28770.2	Thale cress	nucleus	22.52	28.98
CDY48665	Canola	nucleus	22.77	28.93
CDY05606	Canola	nucleus	22.52	28.53
CDY33887	Canola	nucleus	21.78	27.94
Bra020620.1-P	Field mustard	nucleus	21.78	27.94
KRG89569	Soybean	nucleus	14.85	27.91
Os07t0182000-01	Rice	nucleus	29.46	27.29
TraesCS1D01G332200.1	Wheat	nucleus	26.24	26.3
CDX73466	Canola	nucleus	24.26	25.93
AT3G54620.1	Thale cress	nucleus	25.5	25.56
TraesCS1B01G343500.1	Wheat	nucleus	25.74	25.43
CDX78251	Canola	nucleus	24.01	25.26
Bra007083.1-P	Field mustard	nucleus	24.01	25.26
CDY55832	Canola	nucleus	19.55	25.08
CDY14423	Canola	nucleus	23.02	25.0
CDY07692	Canola	nucleus	23.02	24.93
EES16316	Sorghum	nucleus	19.55	24.92
Bra000102.1-P	Field mustard	nucleus	22.52	24.86
CDY22069	Canola	nucleus	24.01	24.56
HORVU1Hr1G077530.1	Barley	nucleus	24.75	24.45
CDY21903	Canola	nucleus	23.76	24.37
PGSC0003DMT400050096	Potato	nucleus	26.98	24.17
Bra036251.1-P	Field mustard	nucleus	23.27	23.86
EER90165	Sorghum	nucleus	16.34	23.0
Solyc01g097330.2.1	Tomato	nucleus	25.5	22.69
TraesCS1A01G329900.1	Wheat	nucleus	20.54	22.68
KXG29589	Sorghum	nucleus	17.08	21.56
AT4G02640.2	Thale cress	nucleus	22.03	21.34
VIT_00s1609g00010.t01	Wine grape	cytosol	3.96	11.11

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	MapMan:15.5.4.2	UniProt:A0A1B6Q9E3	InterPro:Basic_leucine-zipper_C	ncoils:Coil
GO:GO:0003674	GO:GO:0003700	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR004827	EnsemblPlants:KXG34539	ProteinID:KXG34539	ProteinID:KXG34539.2
PFAM:PF00170	PFAM:PF12498	ScanProsite:PS00036	PFscan:PS50217	PANTHER:PTHR22952	PANTHER:PTHR22952:SF90
SMART:SM00338	EnsemblPlantsGene:SORBI_3002G055000	SUPFAM:SSF57959	UniParc:UPI0009DC87CF	InterPro:bZIP	SEG:seg

Description

hypothetical protein

Coordinates

chr2:+:5254989..5257807

Molecular Weight (calculated)

44310.2 Da

IEP (calculated)

4.265

GRAVY (calculated)

-0.498

Length

404 amino acids

Sequence
(BLAST)

001: MEPVFSMEEI LGPFWDLPSP PPPEQQPLVI GTSSVVIDGV VTHGGNGEGS NMMDQIQNTT EWTFERLLEE ELLTDTTPVA NSSCPALNVD PVVEVDQGAM
101: APEAVSAVGD PMEYNAILKR KLEEDLMAFK MWRASTSGVN SEGSNNENGG GTIYYTKLNG EDLINNHAQN ADLHVRLTTS SSSRDPSPSD EDMDGEVEIL
201: GFKMPTEERV RKRKESNRES ARRSRYRKAA HLKDLEDQVD KLKAENSCLL RRLAALNQKY NDATVDNRVL KADMETLRAK VKMGEDSLKR IIEMTSLTSI
301: PIPELPSSSD VPVHIQDNIV NYFTTTPAGD ALADNSFMPM PDPLPLQLQA EEPTINGALN ATEMNQIATH CAAGSQPSMQ LIQETMGAMM PTSSGSTLQE
401: SELL

Best Arabidopsis Sequence Match ( AT3G54620.1 )
(BLAST)

001: MHIVFSVDDL TESFWPVPAP APSPGSSSTP SPTQNVADGM TRSQSEWAFH RLINELSGSD SSPTTNTIER SPPPVQSLSR LEETVDETED VVEIQKPQNH
101: RRLPVDDQGK NRNRAPSSDP VDSSAPVVVD PNQYHAILKS KLELACAAVA RRVGTVKPED SSASASNQKQ AQGSIVAQTS PGASSVRFSP TTSTQKKPDV
201: PARQTSISSR DDSDDDDLDG DADNGDPTDV KRARRMLSNR ESARRSRRRK QEQMNEFDTQ VGQLRAEHST LINRLSDMNH KYDAAAVDNR ILRADIETLR
301: TKVKMAEETV KRVTGVNPLH WSRPNMGIPF SNTPSASSSI PPNSNHILKP ANSSTNTSAG LAQNQRVETA NFLPEQVNRE GMQNPFAPDS NLYETLPHWN
401: HKH

Arabidopsis Description

BZIP25Basic leucine zipper 25 [Source:UniProtKB/Swiss-Prot;Acc:Q9M1G6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.