CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
EER90165
EER90738
EER95953
EER96530
EES04085
EES14897
EES16316
KXG29589
KXG34539
OQU89229

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G54620.1	EER96530	AT1G75390.1	16709202
AT3G54620.1	EES14897	AT1G75390.1	16709202
AT3G54620.1	EER96530	AT2G18160.1	16709202
AT3G54620.1	EES14897	AT2G18160.1	16709202
AT3G54620.1	EES04085	AT3G24650.1	12657652
AT3G54620.1	OQU89229	AT3G24650.1	12657652
AT3G54620.1	EER90738	AT3G54620.1	16709202
AT3G54620.1	EER95953	AT3G54620.1	16709202
AT3G54620.1	EES16316	AT3G54620.1	16709202
AT3G54620.1	KXG34539	AT3G54620.1	16709202
AT3G54620.1	EER96530	AT3G62420.1	16709202
AT3G54620.1	EES14897	AT3G62420.1	16709202
AT3G54620.1	EER96530	AT3G62420.1	16810321
AT3G54620.1	EES14897	AT3G62420.1	16810321
AT3G54620.1	EER96530	AT4G34590.1	16709202
AT3G54620.1	EES14897	AT4G34590.1	16709202
AT3G54620.1	EER90165	AT5G24800.1	16709202
AT3G54620.1	KXG29589	AT5G24800.1	16709202

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d030995_P002	Maize	nucleus	66.88	68.39
TraesCS5B01G059200.1	Wheat	nucleus	49.84	53.02
TraesCS5A01G057500.2	Wheat	nucleus	49.84	53.02
TraesCS5D01G068800.1	Wheat	nucleus	45.11	47.99
Os12t0601800-01	Rice	nucleus	39.75	47.19
HORVU5Hr1G014170.10	Barley	nucleus, plastid	52.37	44.74
Solyc08g022080.2.1	Tomato	mitochondrion, nucleus	18.93	42.55
GSMUA_Achr10P...	Banana	nucleus	29.02	41.44
AT5G28770.2	Thale cress	nucleus	31.86	32.17
CDX86210	Canola	nucleus	29.97	30.25
KRG89569	Soybean	nucleus	20.5	30.23
Bra010010.1-P	Field mustard	nucleus	29.65	29.94
CDY48665	Canola	nucleus	29.97	29.87
CDY05606	Canola	nucleus	29.65	29.47
Bra020620.1-P	Field mustard	nucleus	28.71	28.89
CDY33887	Canola	nucleus	28.71	28.89
PGSC0003DMT400050096	Potato	nucleus	36.28	25.5
EER90165	Sorghum	nucleus	22.4	24.74
Solyc01g097330.2.1	Tomato	nucleus	35.33	24.67
Bra000102.1-P	Field mustard	nucleus	27.44	23.77
KXG29589	Sorghum	nucleus	23.97	23.75
CDX73466	Canola	nucleus	27.44	23.02
EER90738	Sorghum	nucleus	29.34	22.96
CDX78251	Canola	nucleus	27.76	22.92
CDY14423	Canola	nucleus	26.81	22.85
CDY07692	Canola	nucleus	26.81	22.79
Bra007083.1-P	Field mustard	nucleus	27.13	22.4
CDY55832	Canola	nucleus	22.08	22.22
Bra036251.1-P	Field mustard	nucleus	27.13	21.83
CDY22069	Canola	nucleus	27.13	21.77
AT3G54620.1	Thale cress	nucleus	27.44	21.59
CDY21903	Canola	nucleus	26.81	21.57
AT4G02640.2	Thale cress	nucleus	27.13	20.62
KXG34539	Sorghum	nucleus	24.92	19.55
EER95953	Sorghum	nucleus	24.29	17.3

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	MapMan:15.5.4.2	EntrezGene:8070110	InterPro:Basic_leucine-zipper_C	UniProt:C5YRE4
ncoils:Coil	EnsemblPlants:EES16316	ProteinID:EES16316	ProteinID:EES16316.1	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR004827	PFAM:PF00170	PFAM:PF12498
ScanProsite:PS00036	PFscan:PS50217	PANTHER:PTHR22952	PANTHER:PTHR22952:SF165	SMART:SM00338	EnsemblPlantsGene:SORBI_3008G157100
SUPFAM:SSF57959	unigene:Sbi.13068	UniParc:UPI0001A8801D	RefSeq:XP_002442478.1	InterPro:bZIP	SEG:seg

Description

hypothetical protein

Coordinates

chr8:+:58967358..58972586

Molecular Weight (calculated)

33894.5 Da

IEP (calculated)

4.830

GRAVY (calculated)

-0.564

Length

317 amino acids

Sequence
(BLAST)

001: MAGGGADDDD VVEVSCGGRG GGDPGAYAAV LKRKLDLYCA AVAKSMEAKS QESSLGYPNS QASDTSQLIS QASFDGDIDG AGLVTNSNVI IEDDDFQGKP
101: TNSGTSKELS DDDGDLEENT DPTNAKKMRR MLSNRESARR SRKRKQAHLN DLESQVSRLT SENASLLKRL ADMTQKYKDA SLDNKNLTVD IETMRRKVNI
201: AEEAVRRLTG TTLMLSTAFD KPMSSTPLSS CASDAASASV AIEDSAKHFL HAPLQSGQMK LDILNAAIPL TSEGIGTKPA SLQRVASLEN LQKRIIGDSM
301: HSETASTFSE PEALADR

Best Arabidopsis Sequence Match ( AT5G28770.2 )
(BLAST)

001: MEKVFSDEEI SGNHHWSVNG MTSLNRSASE WAFNRFIQES SAAADDGEST TACGVSVSSP PNVPVDSEEY RAFLKSKLNL ACAAVAMKRG TFIKPQDTSG
101: RSDNGGANES EQASLASSKA TPMMSSAITS GSELSGDEEE ADGETNMNPT NVKRVKRMLS NRESARRSRR RKQAHLSELE TQVSQLRVEN SKLMKGLTDV
201: TQTFNDASVE NRVLKANIET LRAKVKMAEE TVKRLTGFNP MFHNMPQIVS TVSLPSETSN SPDTTSSQVT TPEIISSGNK GKALIGCKMN RTASMRRVES
301: LEHLQKRIRS VGDQ

Arabidopsis Description

BZIP63Basic leucine zipper 63 [Source:UniProtKB/Swiss-Prot;Acc:B9DGI8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.