Factsheet for Solyc01g097330.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400050096	Potato	nucleus	80.84	81.37
Solyc08g022080.2.1	Tomato	mitochondrion, nucleus	22.91	73.76
GSMUA_Achr10P...	Banana	nucleus	27.97	57.21
KRH34085	Soybean	nucleus	51.1	55.64
VIT_14s0030g02200.t01	Wine grape	nucleus	51.54	55.32
KRG96973	Soybean	nucleus	44.05	54.2
KRG92673	Soybean	nucleus	46.7	52.61
GSMUA_Achr7P07650_001	Banana	nucleus	24.89	49.78
Bra020620.1-P	Field mustard	nucleus	34.36	49.52
CDY33887	Canola	nucleus	34.36	49.52
CDY05606	Canola	nucleus	34.58	49.22
Zm00001d034447_P001	Maize	nucleus	29.3	49.08
AT5G28770.2	Thale cress	nucleus	33.7	48.73
Bra010010.1-P	Field mustard	nucleus	33.48	48.41
CDX86210	Canola	nucleus	33.26	48.09
CDY48665	Canola	nucleus	33.26	47.48
Zm00001d034455_P001	Maize	nucleus	27.97	45.2
Zm00001d034457_P003	Maize	nucleus	39.43	43.77
KRH68733	Soybean	nucleus	39.65	43.48
GSMUA_Achr4P28530_001	Banana	nucleus	38.99	41.75
EER90738	Sorghum	nucleus	37.0	41.48
Os03t0796900-01	Rice	nucleus	37.89	40.47
TraesCS5B01G444100.2	Wheat	nucleus	35.46	40.25
TraesCS5A01G440400.1	Wheat	nucleus	34.58	40.05
TraesCS5A01G057500.2	Wheat	nucleus	26.21	39.93
TraesCS5D01G068800.1	Wheat	nucleus	26.21	39.93
TraesCS5D01G447500.1	Wheat	nucleus	35.24	39.41
TraesCS5B01G059200.1	Wheat	nucleus	25.55	38.93
GSMUA_Achr2P12610_001	Banana	nucleus	35.24	38.84
Os12t0601800-01	Rice	nucleus	22.47	38.2
Zm00001d013074_P003	Maize	cytosol	36.12	37.44
Zm00001d030995_P002	Maize	nucleus	25.55	37.42
EES16316	Sorghum	nucleus	24.67	35.33
HORVU5Hr1G106120.3	Barley	nucleus	36.12	34.38
HORVU5Hr1G014170.10	Barley	nucleus, plastid	26.65	32.61
Os07t0182000-01	Rice	nucleus	27.09	28.21
TraesCS1B01G343500.1	Wheat	nucleus	24.01	26.65
TraesCS1D01G332200.1	Wheat	nucleus	23.35	26.3
KXG34539	Sorghum	nucleus	22.69	25.5
Zm00001d018971_P003	Maize	nucleus	25.55	25.44
HORVU1Hr1G077530.1	Barley	nucleus	21.59	23.96
Solyc08g006110.2.1	Tomato	nucleus	18.5	23.93
EER95953	Sorghum	nucleus	22.91	23.37
TraesCS1A01G329900.1	Wheat	nucleus	17.4	21.58

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	MapMan:15.5.4.2	InterPro:Basic_leucine-zipper_C	ncoils:Coil	GO:GO:0003674
GO:GO:0003700	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009719	GO:GO:0009987	GO:GO:0019725	GO:GO:0042802	GO:GO:0046982	GO:GO:0071215
GO:GO:0071333	InterPro:IPR004827	UniProt:K4B0C0	PFAM:PF00170	PFAM:PF12498	ScanProsite:PS00036
PFscan:PS50217	PANTHER:PTHR22952	PANTHER:PTHR22952:SF348	SMART:SM00338	SUPFAM:SSF57959	EnsemblPlantsGene:Solyc01g097330.2
EnsemblPlants:Solyc01g097330.2.1	UniParc:UPI000276801C	InterPro:bZIP	SEG:seg	:	:

Description

No Description!

Coordinates

chr1:+:88229366..88235189

Molecular Weight (calculated)

48617.5 Da

IEP (calculated)

6.688

GRAVY (calculated)

-0.671

Length

454 amino acids

Sequence
(BLAST)

001: MDRVFSVDDD IGDHFWSTPP TAELGVDSPT SAAAAAAISY SKMMNRSSSE WAFQRFLLEA AGAAGTTTSS PPQPPTMASS SSSSHQNDVV EIKDENLSTP
101: NLNSGTALNS KPAATLFGSA TPQNIHVDAE EYQAFLKSRL DLACAAVALT RAKNLKPQDA SSIAPDKGPE TASASQSVSH ITSKGSGQEV RKVQDKDSGG
201: PVGIPSLPAV QKKPGVQVKS TTSGSSRELS DDDEAEGEAE TTQGTDPADT KRVRRMLSNR ESARRSRRRK QAHLTELETQ VSQLRVENSS LLKRLTDISQ
301: KYNESAVDNR VLKADVETLR AKVKMAEETV KRVTGLNPLF QAMSEMSSMA MPSFSGSPSD TSTDTAVPVP DDSQHHYYQQ PPNNHMPTHD PRIQNGMVDV
401: PTIGTVQQNP AAAAVGGNKM GRTASMQRVA SLEHLQKRIR GEVSSCGTQG RGEQ

Best Arabidopsis Sequence Match ( AT5G28770.2 )
(BLAST)

001: MEKVFSDEEI SGNHHWSVNG MTSLNRSASE WAFNRFIQES SAAADDGEST TACGVSVSSP PNVPVDSEEY RAFLKSKLNL ACAAVAMKRG TFIKPQDTSG
101: RSDNGGANES EQASLASSKA TPMMSSAITS GSELSGDEEE ADGETNMNPT NVKRVKRMLS NRESARRSRR RKQAHLSELE TQVSQLRVEN SKLMKGLTDV
201: TQTFNDASVE NRVLKANIET LRAKVKMAEE TVKRLTGFNP MFHNMPQIVS TVSLPSETSN SPDTTSSQVT TPEIISSGNK GKALIGCKMN RTASMRRVES
301: LEHLQKRIRS VGDQ

Arabidopsis Description

BZIP63Basic leucine zipper 63 [Source:UniProtKB/Swiss-Prot;Acc:B9DGI8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.