Factsheet for Os03t0796900-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0911700-02
Os02t0175100-01
Os02t0266800-01
Os03t0796900-01
Os06t0662200-01
Os07t0182000-01
Os08t0357300-01
Os09t0306400-01
Os12t0601800-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G54620.1	Os08t0357300-01	AT1G75390.1	16709202
AT3G54620.1	Os09t0306400-01	AT1G75390.1	16709202
AT3G54620.1	Os08t0357300-01	AT2G18160.1	16709202
AT3G54620.1	Os09t0306400-01	AT2G18160.1	16709202
AT3G54620.1	Os01t0911700-02	AT3G24650.1	12657652
AT3G54620.1	Os03t0796900-01	AT3G54620.1	16709202
AT3G54620.1	Os07t0182000-01	AT3G54620.1	16709202
AT3G54620.1	Os12t0601800-01	AT3G54620.1	16709202
AT3G54620.1	Os08t0357300-01	AT3G62420.1	16709202
AT3G54620.1	Os09t0306400-01	AT3G62420.1	16709202
AT3G54620.1	Os08t0357300-01	AT3G62420.1	16810321
AT3G54620.1	Os09t0306400-01	AT3G62420.1	16810321
AT3G54620.1	Os08t0357300-01	AT4G34590.1	16709202
AT3G54620.1	Os09t0306400-01	AT4G34590.1	16709202
AT3G54620.1	Os02t0175100-01	AT5G24800.1	16709202
AT3G54620.1	Os02t0266800-01	AT5G24800.1	16709202
AT3G54620.1	Os06t0662200-01	AT5G24800.1	16709202

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d034455_P001	Maize	nucleus	48.0	72.6
TraesCS5B01G444100.2	Wheat	nucleus	65.65	69.75
Zm00001d034447_P001	Maize	nucleus	44.24	69.37
Zm00001d034457_P003	Maize	nucleus	66.12	68.7
EER90738	Sorghum	nucleus	64.71	67.9
TraesCS5A01G440400.1	Wheat	nucleus	62.35	67.6
TraesCS5D01G447500.1	Wheat	nucleus	63.06	66.01
Zm00001d013074_P003	Maize	cytosol	61.65	59.82
HORVU5Hr1G106120.3	Barley	nucleus	64.71	57.65
Solyc08g022080.2.1	Tomato	mitochondrion, nucleus	17.41	52.48
Bra010010.1-P	Field mustard	nucleus	30.12	40.76
CDX86210	Canola	nucleus	30.12	40.76
CDY48665	Canola	nucleus	29.88	39.94
CDY05606	Canola	nucleus	28.94	38.56
AT5G28770.2	Thale cress	nucleus	28.0	37.9
Solyc01g097330.2.1	Tomato	nucleus	40.47	37.89
Os07t0182000-01	Rice	nucleus	38.82	37.84
PGSC0003DMT400050096	Potato	nucleus	40.0	37.69
CDY33887	Canola	nucleus	27.76	37.46
Bra020620.1-P	Field mustard	nucleus	27.76	37.46
CDX73466	Canola	nucleus	30.35	34.13
CDX78251	Canola	nucleus	30.59	33.85
Os12t0601800-01	Rice	nucleus	21.18	33.71
Bra007083.1-P	Field mustard	nucleus	30.35	33.59
KRG89569	Soybean	nucleus	16.94	33.49
CDY07692	Canola	nucleus	28.24	32.17
Bra000102.1-P	Field mustard	nucleus	27.29	31.69
CDY14423	Canola	nucleus	27.29	31.18
CDY55832	Canola	nucleus	22.82	30.79
Bra036251.1-P	Field mustard	nucleus	28.0	30.2
AT3G54620.1	Thale cress	nucleus	28.47	30.02
CDY22069	Canola	nucleus	27.76	29.87
CDY21903	Canola	nucleus	27.53	29.7
AT4G02640.2	Thale cress	nucleus	28.71	29.26
Os06t0662200-01	Rice	nucleus	20.0	28.81
Os02t0266800-01	Rice	nucleus	18.59	26.51
Os02t0175100-01	Rice	mitochondrion, nucleus	17.18	26.35
VIT_00s1609g00010.t01	Wine grape	cytosol	4.94	14.58

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	MapMan:15.5.4.2	EntrezGene:4334424	ProteinID:AAL10017.1	ProteinID:AAP44683.1
ProteinID:ABF99347.1	EMBL:AY072929	ProteinID:BAF13472.1	ProteinID:BAS86847.1	InterPro:Basic_leucine-zipper_C	ncoils:Coil
EMBL:D78609	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR004827
EnsemblPlantsGene:Os03g0796900	EnsemblPlants:Os03t0796900-01	PFAM:PF00170	PFAM:PF12498	PFscan:PS50217	PANTHER:PTHR22952
PANTHER:PTHR22952:SF90	UniProt:Q7X9A8	SMART:SM00338	SUPFAM:SSF57959	UniParc:UPI000019C5BC	RefSeq:XP_015631619.1
InterPro:bZIP	SEG:seg	:	:	:	:

Description

ENDOSPERM BZIPbZIP transcription factor, Globulin gene promoter in endosperm (Os03t0796900-01)

Coordinates

chr3:-:33187429..33191788

Molecular Weight (calculated)

44255.3 Da

IEP (calculated)

4.861

GRAVY (calculated)

-0.504

Length

425 amino acids

Sequence
(BLAST)

001: MERVFSVEEI SDPFWVPPPP PQSAAAAQQQ GGGGVASGGG GGVAGGGGGG NAMNRCPSEW YFQKFLEEAV LDSPVPNPSP RAEAGGIRGA GGVVPVDVKQ
101: PQLSAAAAAA ATTSAVVDPV EYNAMLKQKL EKDLAAVAMW RASGTVPPER PGAGSSLLNA DVSHIGAPNS IGGNATPVQN MLSGPSGGSG SQLVQNVDVL
201: VKQPTSSSSR EQSDDDDMEG EAETTGTARP ADQRLQRRKQ SNRESARRSR SRKAAHLNEL EAQVSQLRVE NSSLLRRLAD VNQKYNDAAV DNRVLKADVE
301: TLRAKVKMAE DSVKRVTGMN ALFPAASDMS SLSMPFNSSP SEATSDAAVP IQDDPNNYFA TNNDIGGNNN YMPDIPSSAQ EDEDFVNGAL AAGKIGRTAS
401: LQRVASLEHL QKRMCGGPAS SGSTS

Best Arabidopsis Sequence Match ( AT5G28770.2 )
(BLAST)

001: MEKVFSDEEI SGNHHWSVNG MTSLNRSASE WAFNRFIQES SAAADDGEST TACGVSVSSP PNVPVDSEEY RAFLKSKLNL ACAAVAMKRG TFIKPQDTSG
101: RSDNGGANES EQASLASSKA TPMMSSAITS GSELSGDEEE ADGETNMNPT NVKRVKRMLS NRESARRSRR RKQAHLSELE TQVSQLRVEN SKLMKGLTDV
201: TQTFNDASVE NRVLKANIET LRAKVKMAEE TVKRLTGFNP MFHNMPQIVS TVSLPSETSN SPDTTSSQVT TPEIISSGNK GKALIGCKMN RTASMRRVES
301: LEHLQKRIRS VGDQ

Arabidopsis Description

BZIP63Basic leucine zipper 63 [Source:UniProtKB/Swiss-Prot;Acc:B9DGI8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.