Factsheet for HORVU5Hr1G106120.3

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
iPSORT:	mitochondrion
MultiLoc:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G077530.1
HORVU3Hr1G092690.2
HORVU5Hr1G014170.10
HORVU5Hr1G054510.1
HORVU5Hr1G106120.3
HORVU6Hr1G031330.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G54620.1	HORVU5Hr1G054510.1	AT1G75390.1	16709202
AT3G54620.1	HORVU5Hr1G054510.1	AT2G18160.1	16709202
AT3G54620.1	HORVU3Hr1G092690.2	AT3G24650.1	12657652
AT3G54620.1	HORVU1Hr1G077530.1	AT3G54620.1	16709202
AT3G54620.1	HORVU5Hr1G014170.10	AT3G54620.1	16709202
AT3G54620.1	HORVU5Hr1G106120.3	AT3G54620.1	16709202
AT3G54620.1	HORVU5Hr1G054510.1	AT3G62420.1	16709202
AT3G54620.1	HORVU5Hr1G054510.1	AT3G62420.1	16810321
AT3G54620.1	HORVU5Hr1G054510.1	AT4G34590.1	16709202
AT3G54620.1	HORVU6Hr1G031330.2	AT5G24800.1	16709202

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G444100.2	Wheat	nucleus	76.31	91.0
TraesCS5A01G440400.1	Wheat	nucleus	72.33	88.01
TraesCS5D01G447500.1	Wheat	nucleus	73.79	86.7
Zm00001d034447_P001	Maize	nucleus	39.62	69.74
EER90738	Sorghum	nucleus	58.07	68.4
Zm00001d034457_P003	Maize	nucleus	58.28	67.97
Os03t0796900-01	Rice	nucleus	57.65	64.71
Zm00001d034455_P001	Maize	nucleus	37.53	63.7
Zm00001d013074_P003	Maize	cytosol	54.3	59.13
Solyc08g022080.2.1	Tomato	mitochondrion, nucleus	16.98	57.45
Bra010010.1-P	Field mustard	nucleus	26.21	39.81
CDY05606	Canola	nucleus	26.42	39.5
CDX86210	Canola	nucleus	26.0	39.49
Bra020620.1-P	Field mustard	nucleus	26.0	39.37
CDY48665	Canola	nucleus	26.0	38.99
CDY33887	Canola	nucleus	25.58	38.73
AT5G28770.2	Thale cress	nucleus	24.74	37.58
Solyc01g097330.2.1	Tomato	nucleus	34.38	36.12
PGSC0003DMT400050096	Potato	nucleus	33.33	35.26
KRG89569	Soybean	nucleus	15.09	33.49
CDX78251	Canola	nucleus	26.0	32.29
Bra007083.1-P	Field mustard	nucleus	25.79	32.03
CDX73466	Canola	nucleus	25.16	31.75
Bra000102.1-P	Field mustard	nucleus	24.11	31.42
CDY07692	Canola	nucleus	24.53	31.37
CDY14423	Canola	nucleus	23.48	30.11
CDY55832	Canola	nucleus	19.71	29.84
AT3G54620.1	Thale cress	nucleus	24.74	29.28
CDY21903	Canola	nucleus	23.27	28.17
HORVU1Hr1G077530.1	Barley	nucleus	23.9	27.87
Bra036251.1-P	Field mustard	nucleus	22.64	27.41
CDY22069	Canola	nucleus	22.64	27.34
AT4G02640.2	Thale cress	nucleus	23.9	27.34
HORVU5Hr1G014170.10	Barley	nucleus, plastid	21.17	27.22
VIT_00s1609g00010.t01	Wine grape	cytosol	4.61	15.28
HORVU6Hr1G031330.2	Barley	nucleus	8.81	14.63

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	MapMan:15.5.4.2	UniProt:A0A287SLY3	InterPro:Basic_leucine-zipper_C	ncoils:Coil
GO:GO:0003674	GO:GO:0003700	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:HORVU5Hr1G106120	EnsemblPlants:HORVU5Hr1G106120.3	InterPro:IPR004827	PFAM:PF00170
PFAM:PF12498	PFscan:PS50217	PANTHER:PTHR22952	PANTHER:PTHR22952:SF90	SMART:SM00338	SUPFAM:SSF57959
UniParc:UPI000B4797F6	InterPro:bZIP	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr5H:+:623520597..623525019

Molecular Weight (calculated)

50600.4 Da

IEP (calculated)

6.614

GRAVY (calculated)

-0.495

Length

477 amino acids

Sequence
(BLAST)

001: PACAGAEPWT RDRLLTHLTI FPFTIQSLLF LLPKRNPTPT PHRPEGGKFP IKPSNPPRNP THRIGTSDAP AAGLLSLSHA RMERVFSVEE IPDPFWGQPS
101: PRPAAGAPAA GGAGAMNRCP SEWYFQKFLE EAVLDSPAAD PSPMSGASGA EVKRPAASAV AVAGTATGAA VDPVEYNAML KQKLEKDLAA VAMWRASGAM
201: PPERFAASPS LPNADVQHIG TINPIGGNVV PLQNKLAGGA SGVSGPHLVQ NADALVKQAA SSSSREQSED DDMEGEDEIT GNGVPTDQRL RRRKQSNRES
301: ARRSRSRKAA HLNELEAQVS QLRVENSSLL RRLADVNQKY NGAAVDNRVL KADVETLRAK VKMAEDSVKR VTGMSALFPA GSDMSSLSMP FTGSPSEATS
401: DAAVPDDLSA YFSTSEAGGN NGYMPEMASS AQEDDNFLNE TMDTSKMGRP DSLHRVASLE HLQKRMCGGP ASSGSTS

Best Arabidopsis Sequence Match ( AT5G28770.2 )
(BLAST)

001: MEKVFSDEEI SGNHHWSVNG MTSLNRSASE WAFNRFIQES SAAADDGEST TACGVSVSSP PNVPVDSEEY RAFLKSKLNL ACAAVAMKRG TFIKPQDTSG
101: RSDNGGANES EQASLASSKA TPMMSSAITS GSELSGDEEE ADGETNMNPT NVKRVKRMLS NRESARRSRR RKQAHLSELE TQVSQLRVEN SKLMKGLTDV
201: TQTFNDASVE NRVLKANIET LRAKVKMAEE TVKRLTGFNP MFHNMPQIVS TVSLPSETSN SPDTTSSQVT TPEIISSGNK GKALIGCKMN RTASMRRVES
301: LEHLQKRIRS VGDQ

Arabidopsis Description

BZIP63Basic leucine zipper 63 [Source:UniProtKB/Swiss-Prot;Acc:B9DGI8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.