Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 2
- nucleus 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG89569 | Soybean | nucleus | 11.11 | 7.44 |
| Zm00001d034455_P001 | Maize | nucleus | 12.5 | 6.41 |
| Zm00001d034447_P001 | Maize | nucleus | 11.81 | 6.27 |
| VIT_04s0008g02750.t01 | Wine grape | nucleus | 14.58 | 6.02 |
| TraesCS5A01G440400.1 | Wheat | nucleus | 14.58 | 5.36 |
| Os07t0182000-01 | Rice | nucleus | 15.97 | 5.28 |
| TraesCS5B01G444100.2 | Wheat | nucleus | 14.58 | 5.25 |
| TraesCS5D01G447500.1 | Wheat | nucleus | 14.58 | 5.17 |
| Os03t0796900-01 | Rice | nucleus | 14.58 | 4.94 |
| EER90738 | Sorghum | nucleus | 13.89 | 4.94 |
| VIT_14s0030g02200.t01 | Wine grape | nucleus | 13.89 | 4.73 |
| Zm00001d034457_P003 | Maize | nucleus | 13.19 | 4.65 |
| HORVU5Hr1G106120.3 | Barley | nucleus | 15.28 | 4.61 |
| Zm00001d013074_P003 | Maize | cytosol | 13.89 | 4.57 |
| Zm00001d018971_P003 | Maize | nucleus | 13.89 | 4.39 |
| VIT_07s0141g00170.t01 | Wine grape | nucleus | 13.19 | 4.2 |
| TraesCS1D01G332200.1 | Wheat | nucleus | 11.11 | 3.97 |
| KXG34539 | Sorghum | nucleus | 11.11 | 3.96 |
| EER95953 | Sorghum | nucleus | 11.81 | 3.82 |
| HORVU1Hr1G077530.1 | Barley | nucleus | 9.03 | 3.18 |
| TraesCS1A01G329900.1 | Wheat | nucleus | 7.64 | 3.01 |
| TraesCS1B01G343500.1 | Wheat | nucleus | 8.33 | 2.93 |
Protein Annotations
| ArrayExpress:VIT_00s1609g00010 | EnsemblPlants:VIT_00s1609g00010.t01 | EnsemblPlantsGene:VIT_00s1609g00010 | SEG:seg | UniParc:UPI00023E40AC | MapMan:35.2 |
Description
No Description!
Coordinates
chrUn:+:39811754..39812185
Molecular Weight (calculated)
15094.1 Da
IEP (calculated)
4.323
GRAVY (calculated)
-0.011
Length
144 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPVFFSLEE AMPEPDPNPC LTSSPPLEAH VLAGGLGGVG AGKVVGGGAT NECAAEWCFQ TSMDEPWMLN VPTAPVASPE ASTLYPNPTA EGSRKRPYDV
101: HEMVGAVEVI PTPPAASPVV DPVAYNAMLR RKLDAHLAAV AMLR
101: HEMVGAVEVI PTPPAASPVV DPVAYNAMLR RKLDAHLAAV AMLR
001: MGSSKLKRAI GAVKDQTSVG LAKVGGRSSS LTELEIAVVK ATRHDDYPAE DKYIREILCL TSYSRNYVSA CVATLSRRLN KTKNWSVALK TLILIQRLLT
101: DGDRAYEQEI FFATRRGTRL LNMSDFRDAS QSDSWDYSAF VRTYALYLDE RLDYRMQGRR GKKKSGGGGG GDGDSGEEDD HRGTSNDIRS KAIVVKSKPV
201: AEMKTEKIFN RVQHLQQLLD RFLACRPTGN AKNNRVVIVA MYPIVKESFQ LYYNITEIMG VLIERFMELD IHDSIKVYEI FCRVSKQFDE LDPFYGWCKN
301: MAVARSSEYP ELEKITQKKL DLMDEFIRDK SALAAQTTKS SSKRSNKSEE EESKTEYIQE NQEDLNSIKA LPAPEQKEEE EEEEKMETKK DVEEVVSRQD
401: QEGDLLDLTD EAGVTAGTVG DSLALALFDG VVGTESASGP GWEAFNDNSA DWETDLVRSA TRLSGQKSEL GGGFDTLLLD GMYQYGAVNA AVKTSTAYGS
501: SGSASSVAFG SAGSPAASML ALPAPPPTAN GNRNSPVMVD PFAASLEVAP PAYVQMNDME KKQRLLMEEQ IMWDQYNRSG RQGHMNFGQN QQQQYYQLPY
601: SMGPYSYTPR Y
101: DGDRAYEQEI FFATRRGTRL LNMSDFRDAS QSDSWDYSAF VRTYALYLDE RLDYRMQGRR GKKKSGGGGG GDGDSGEEDD HRGTSNDIRS KAIVVKSKPV
201: AEMKTEKIFN RVQHLQQLLD RFLACRPTGN AKNNRVVIVA MYPIVKESFQ LYYNITEIMG VLIERFMELD IHDSIKVYEI FCRVSKQFDE LDPFYGWCKN
301: MAVARSSEYP ELEKITQKKL DLMDEFIRDK SALAAQTTKS SSKRSNKSEE EESKTEYIQE NQEDLNSIKA LPAPEQKEEE EEEEKMETKK DVEEVVSRQD
401: QEGDLLDLTD EAGVTAGTVG DSLALALFDG VVGTESASGP GWEAFNDNSA DWETDLVRSA TRLSGQKSEL GGGFDTLLLD GMYQYGAVNA AVKTSTAYGS
501: SGSASSVAFG SAGSPAASML ALPAPPPTAN GNRNSPVMVD PFAASLEVAP PAYVQMNDME KKQRLLMEEQ IMWDQYNRSG RQGHMNFGQN QQQQYYQLPY
601: SMGPYSYTPR Y
Arabidopsis Description
Putative clathrin assembly protein At4g02650 [Source:UniProtKB/Swiss-Prot;Acc:Q8GX47]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.