Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G329900.1 | Wheat | nucleus | 84.86 | 93.44 |
| TraesCS1B01G343500.1 | Wheat | nucleus | 81.14 | 79.95 |
| HORVU1Hr1G077530.1 | Barley | nucleus | 64.02 | 63.08 |
| Solyc08g022080.2.1 | Tomato | mitochondrion, nucleus | 14.14 | 40.43 |
| AT5G28770.2 | Thale cress | nucleus | 23.82 | 30.57 |
| Bra010010.1-P | Field mustard | nucleus | 23.82 | 30.57 |
| TraesCS5D01G447500.1 | Wheat | nucleus | 30.52 | 30.3 |
| CDX86210 | Canola | nucleus | 23.57 | 30.25 |
| CDY48665 | Canola | nucleus | 23.82 | 30.19 |
| Bra020620.1-P | Field mustard | nucleus | 23.08 | 29.52 |
| CDY33887 | Canola | nucleus | 22.83 | 29.21 |
| CDY05606 | Canola | nucleus | 22.83 | 28.84 |
| Os07t0182000-01 | Rice | nucleus | 30.27 | 27.98 |
| KRG89569 | Soybean | nucleus | 14.14 | 26.51 |
| KXG34539 | Sorghum | nucleus | 26.3 | 26.24 |
| EER95953 | Sorghum | nucleus | 28.04 | 25.39 |
| Zm00001d018971_P003 | Maize | nucleus | 27.79 | 24.56 |
| PGSC0003DMT400050096 | Potato | nucleus | 27.05 | 24.17 |
| TraesCS5D01G068800.1 | Wheat | nucleus | 17.62 | 23.83 |
| Solyc01g097330.2.1 | Tomato | nucleus | 26.3 | 23.35 |
| CDX73466 | Canola | nucleus | 21.84 | 23.28 |
| CDX78251 | Canola | nucleus | 22.08 | 23.18 |
| Bra007083.1-P | Field mustard | nucleus | 21.84 | 22.92 |
| AT4G02640.2 | Thale cress | nucleus | 23.57 | 22.78 |
| AT3G54620.1 | Thale cress | nucleus | 22.08 | 22.08 |
| CDY22069 | Canola | nucleus | 21.34 | 21.77 |
| Bra036251.1-P | Field mustard | nucleus | 21.09 | 21.57 |
| CDY21903 | Canola | nucleus | 21.09 | 21.57 |
| CDY55832 | Canola | nucleus | 16.63 | 21.27 |
| CDY14423 | Canola | nucleus | 18.36 | 19.89 |
| CDY07692 | Canola | nucleus | 18.36 | 19.84 |
| TraesCS6D01G144400.2 | Wheat | nucleus | 15.14 | 19.49 |
| Bra000102.1-P | Field mustard | nucleus | 17.62 | 19.4 |
| TraesCS7D01G475100.1 | Wheat | nucleus | 11.41 | 18.62 |
| VIT_00s1609g00010.t01 | Wine grape | cytosol | 3.97 | 11.11 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | MapMan:15.5.4.2 | InterPro:Basic_leucine-zipper_C | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005975 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0010581 | GO:GO:0043565 | GO:GO:0045893 |
| InterPro:IPR004827 | PFAM:PF00170 | PFAM:PF12498 | PFscan:PS50217 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF90 |
| SMART:SM00338 | SUPFAM:SSF57959 | EnsemblPlantsGene:TraesCS1D01G332200 | EnsemblPlants:TraesCS1D01G332200.1 | InterPro:bZIP | SEG:seg |
Description
No Description!
Coordinates
chr1D:-:422868976..422873416
Molecular Weight (calculated)
43704.5 Da
IEP (calculated)
6.112
GRAVY (calculated)
-0.482
Length
403 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPVFFSLEE AMREPDPNPC RTSSPPLEAH VLAGGLGGVG AGKVVGGGAT EWCFHESVDE PWLLNVPTAP VANPEASTLY PNPTAEGSRK RRHDVHEMVG
101: AVEVIPTPPA ASPVVDPVAY NAMLRRKLDA HLAAVAMLRT TPGICRQSSH DNGASQNPDS IQGSENHTGD VSVHQLSSSS LEPSPSDGDM EGEAQTIGTM
201: HISAEKANKR KESNRDSARR SRSRKAAHTK ELEEQVSLLR VANNSLMRHL ADVSQRYVNI SIDNRVLKAN VETLEAKVKM VEETMKRVTC TNNFPQAISS
301: SSLGIPFSGS PLDGICDNPL PTQNTSLSYL PTTTTNFVVK NNYIPEPAPA FQIHDQMSSL NMQPVSCLDH HPQRMHIGIP TSTPTPQRES TTLDSNEIVN
401: MMM
101: AVEVIPTPPA ASPVVDPVAY NAMLRRKLDA HLAAVAMLRT TPGICRQSSH DNGASQNPDS IQGSENHTGD VSVHQLSSSS LEPSPSDGDM EGEAQTIGTM
201: HISAEKANKR KESNRDSARR SRSRKAAHTK ELEEQVSLLR VANNSLMRHL ADVSQRYVNI SIDNRVLKAN VETLEAKVKM VEETMKRVTC TNNFPQAISS
301: SSLGIPFSGS PLDGICDNPL PTQNTSLSYL PTTTTNFVVK NNYIPEPAPA FQIHDQMSSL NMQPVSCLDH HPQRMHIGIP TSTPTPQRES TTLDSNEIVN
401: MMM
001: MEKVFSDEEI SGNHHWSVNG MTSLNRSASE WAFNRFIQES SAAADDGEST TACGVSVSSP PNVPVDSEEY RAFLKSKLNL ACAAVAMKRD TSGRSDNGGA
101: NESEQASLAS SKATPMMSSA ITSGSELSGD EEEADGETNM NPTNVKRVKR MLSNRESARR SRRRKQAHLS ELETQVSQLR VENSKLMKGL TDVTQTFNDA
201: SVENRVLKAN IETLRAKVKM AEETVKRLTG FNPMFHNMPQ IVSTVSLPSE TSNSPDTTSS QVTTPEIISS GNKGKALIGC KMNRTASMRR VESLEHLQKR
301: IRSVGDQ
101: NESEQASLAS SKATPMMSSA ITSGSELSGD EEEADGETNM NPTNVKRVKR MLSNRESARR SRRRKQAHLS ELETQVSQLR VENSKLMKGL TDVTQTFNDA
201: SVENRVLKAN IETLRAKVKM AEETVKRLTG FNPMFHNMPQ IVSTVSLPSE TSNSPDTTSS QVTTPEIISS GNKGKALIGC KMNRTASMRR VESLEHLQKR
301: IRSVGDQ
Arabidopsis Description
BZIP63Basic leucine zipper 63 [Source:UniProtKB/Swiss-Prot;Acc:B9DGI8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.