Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G182500.5 | Wheat | nucleus | 88.5 | 88.5 |
| TraesCS6A01G154600.2 | Wheat | nucleus | 86.26 | 85.99 |
| Zm00001d015421_P001 | Maize | nucleus | 60.7 | 57.4 |
| Os02t0175100-01 | Rice | mitochondrion, nucleus | 49.52 | 55.96 |
| KXG29589 | Sorghum | nucleus | 55.27 | 54.06 |
| Os02t0266800-01 | Rice | nucleus | 48.88 | 51.34 |
| TraesCS7D01G475100.1 | Wheat | nucleus | 35.46 | 44.94 |
| HORVU6Hr1G031330.2 | Barley | nucleus | 35.78 | 39.02 |
| GSMUA_Achr1P23640_001 | Banana | nucleus | 30.99 | 38.65 |
| AT5G24800.1 | Thale cress | nucleus | 28.75 | 32.49 |
| CDX88132 | Canola | nucleus | 28.43 | 32.01 |
| VIT_04s0008g02750.t01 | Wine grape | nucleus | 34.5 | 30.95 |
| Bra009793.1-P | Field mustard | nucleus | 28.43 | 30.58 |
| CDY05397 | Canola | nucleus | 27.16 | 30.58 |
| CDY05458 | Canola | nucleus | 26.84 | 30.22 |
| KRH16196 | Soybean | cytosol, nucleus | 14.38 | 29.8 |
| CDX80469 | Canola | nucleus | 26.2 | 29.5 |
| Bra020471.1-P | Field mustard | nucleus | 27.16 | 29.41 |
| KRH04810 | Soybean | nucleus | 29.39 | 28.84 |
| PGSC0003DMT400038493 | Potato | nucleus | 31.31 | 28.08 |
| KRH52637 | Soybean | nucleus | 25.56 | 27.78 |
| KRH61976 | Soybean | nucleus | 26.2 | 27.33 |
| GSMUA_Achr1P15640_001 | Banana | nucleus | 30.03 | 27.25 |
| Solyc08g006110.2.1 | Tomato | nucleus | 30.03 | 26.78 |
| TraesCS5D01G068800.1 | Wheat | nucleus | 22.36 | 23.49 |
| TraesCS5D01G447500.1 | Wheat | nucleus | 25.24 | 19.46 |
| TraesCS1D01G332200.1 | Wheat | nucleus | 19.49 | 15.14 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | MapMan:15.5.4.2 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003700 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR004827 | PFAM:PF00170 | ScanProsite:PS00036 | PFscan:PS50217 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF347 |
| SMART:SM00338 | SUPFAM:SSF57959 | EnsemblPlantsGene:TraesCS6D01G144400 | EnsemblPlants:TraesCS6D01G144400.2 | InterPro:bZIP | TIGR:cd14702 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr6D:-:115020551..115022678
Molecular Weight (calculated)
32962.4 Da
IEP (calculated)
5.382
GRAVY (calculated)
-0.395
Length
313 amino acids
Sequence
(BLAST)
(BLAST)
001: MKKCASELEL EAFIRGRGLA AEQKPGSAAA GANGPYGLFS AADLSSAFGF ADSQALNGTI QNHLWPQSPN LGARHPAVST TIESQSSFYA AASPTSATNL
101: SIKESQAFGG TSGSDSDSES MFDDGGLCDN GTNPTDVKRM RRMVSNRESA RRSRKRKQAH LVELETQVDQ LRGDNASIFK QLTDANQQFT TAVTDNRILK
201: SDVEALRVKV KLAEDMVARG AMSCGLGHLG LSPAALNPCR VPDVLAGLDF LPGGADDACF GSLSPAEQVQ SSPMQSMASL ESLEHSSRMQ HGGGADAVDV
301: WGWDSSSNGA MSK
101: SIKESQAFGG TSGSDSDSES MFDDGGLCDN GTNPTDVKRM RRMVSNRESA RRSRKRKQAH LVELETQVDQ LRGDNASIFK QLTDANQQFT TAVTDNRILK
201: SDVEALRVKV KLAEDMVARG AMSCGLGHLG LSPAALNPCR VPDVLAGLDF LPGGADDACF GSLSPAEQVQ SSPMQSMASL ESLEHSSRMQ HGGGADAVDV
301: WGWDSSSNGA MSK
001: MEKVFSDEEI SGNHHWSVNG MTSLNRSASE WAFNRFIQES SAAADDGEST TACGVSVSSP PNVPVDSEEY RAFLKSKLNL ACAAVAMKRG TFIKPQDTSG
101: RSDNGGANES EQASLASSKA TPMMSSAITS GSELSGDEEE ADGETNMNPT NVKRVKRMLS NRESARRSRR RKQAHLSELE TQVSQLRVEN SKLMKGLTDV
201: TQTFNDASVE NRVLKANIET LRAKVKYFLL SLCLPKLAIE ACLFLAGENG
101: RSDNGGANES EQASLASSKA TPMMSSAITS GSELSGDEEE ADGETNMNPT NVKRVKRMLS NRESARRSRR RKQAHLSELE TQVSQLRVEN SKLMKGLTDV
201: TQTFNDASVE NRVLKANIET LRAKVKYFLL SLCLPKLAIE ACLFLAGENG
Arabidopsis Description
BZIP63Basic leucine zipper 63 [Source:UniProtKB/Swiss-Prot;Acc:B9DGI8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.