Factsheet for Bra020471.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000214.1-P
Bra002368.1-P
Bra003500.1-P
Bra003755.1-P
Bra006595.1-P
Bra007679.1-P
Bra008192.1-P
Bra009793.1-P
Bra010035.1-P
Bra011545.1-P
Bra015847.1-P
Bra017664.1-P
Bra018296.1-P
Bra020471.1-P
Bra024478.1-P
Bra033467.1-P
Bra034639.1-P
Bra037235.1-P
Bra039631.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G24800.1	Bra003755.1-P	AT1G75390.1	16709202
AT5G24800.1	Bra008192.1-P	AT1G75390.1	16709202
AT5G24800.1	Bra015847.1-P	AT1G75390.1	16709202
AT5G24800.1	Bra024478.1-P	AT2G18160.1	16709202
AT5G24800.1	Bra037235.1-P	AT2G18160.1	16709202
AT5G24800.1	Bra039631.1-P	AT2G18160.1	16709202
AT5G24800.1	Bra000214.1-P	AT2G41090.1	17360592
AT5G24800.1	Bra018296.1-P	AT3G51920.1	17360592
AT5G24800.1	Bra033467.1-P	AT3G51920.1	17360592
AT5G24800.1	Bra003500.1-P	AT3G62420.1	16709202
AT5G24800.1	Bra007679.1-P	AT3G62420.1	16709202
AT5G24800.1	Bra003500.1-P	AT3G62420.1	16810321
AT5G24800.1	Bra007679.1-P	AT3G62420.1	16810321
AT5G24800.1	Bra011545.1-P	AT4G34590.1	16709202
AT5G24800.1	Bra017664.1-P	AT4G34590.1	16709202
AT5G24800.1	Bra034639.1-P	AT4G34590.1	16709202
AT5G24800.1	Bra002368.1-P	AT5G21274.1	17360592
AT5G24800.1	Bra006595.1-P	AT5G21274.1	17360592
AT5G24800.1	Bra009793.1-P	AT5G24800.1	16709202
AT5G24800.1	Bra020471.1-P	AT5G24800.1	16709202
AT5G24800.1	Bra010035.1-P	AT5G49450.1	16709202

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY05458	Canola	nucleus	94.46	98.2
CDY05397	Canola	nucleus	93.77	97.48
AT5G24800.1	Thale cress	nucleus	75.43	78.7
Bra009793.1-P	Field mustard	nucleus	71.28	70.79
KRH16196	Soybean	cytosol, nucleus	19.38	37.09
KRH61976	Soybean	nucleus	37.37	36.0
KRH52637	Soybean	nucleus	34.95	35.07
GSMUA_Achr1P23640_001	Banana	nucleus	30.45	35.06
VIT_04s0008g02750.t01	Wine grape	nucleus	40.14	33.24
TraesCS7B01G391800.1	Wheat	nucleus	27.68	32.26
TraesCS7D01G475100.1	Wheat	nucleus	27.34	31.98
TraesCS7A01G488600.2	Wheat	nucleus	27.68	31.87
Zm00001d003529_P001	Maize	cytosol	14.19	31.78
Zm00001d050588_P002	Maize	nucleus	24.22	30.84
Zm00001d046937_P001	Maize	nucleus	29.07	29.79
Os06t0662200-01	Rice	nucleus	29.76	29.15
EER90165	Sorghum	nucleus	28.37	28.57
Os02t0175100-01	Rice	mitochondrion, nucleus	27.34	28.52
Os02t0266800-01	Rice	nucleus	29.07	28.19
KXG29589	Sorghum	nucleus	30.8	27.81
Zm00001d015421_P001	Maize	nucleus	31.49	27.49
TraesCS6B01G182500.5	Wheat	nucleus	29.76	27.48
TraesCS6A01G154600.2	Wheat	nucleus	29.76	27.39
PGSC0003DMT400038493	Potato	nucleus	32.87	27.22
TraesCS6D01G144400.2	Wheat	nucleus	29.41	27.16
Solyc08g006110.2.1	Tomato	nucleus	32.87	27.07
KRH04810	Soybean	nucleus	29.76	26.96
Bra010010.1-P	Field mustard	nucleus	27.34	25.16
Bra020620.1-P	Field mustard	nucleus	27.34	25.08
GSMUA_Achr1P15640_001	Banana	nucleus	29.07	24.35
Bra000102.1-P	Field mustard	nucleus	29.76	23.5
Bra007083.1-P	Field mustard	nucleus	25.26	19.01
Bra036251.1-P	Field mustard	nucleus	24.91	18.27
HORVU6Hr1G031330.2	Barley	nucleus	15.92	16.03

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	MapMan:15.5.4.2	InterPro:Basic_leucine-zipper_C	EnsemblPlantsGene:Bra020471	EnsemblPlants:Bra020471.1
EnsemblPlants:Bra020471.1-P	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	InterPro:IPR004827	UniProt:M4DVC7	PFAM:PF00170	PFAM:PF12498	ScanProsite:PS00036
PFscan:PS50217	PANTHER:PTHR22952	PANTHER:PTHR22952:SF113	SMART:SM00338	SUPFAM:SSF57959	UniParc:UPI0002547051
InterPro:bZIP	SEG:seg	:	:	:	:

Description

AT5G24800 (E=4e-107) ATBZIP9, BZO2H2, BZIP9 | BZIP9 (BASIC LEUCINE ZIPPER 9); DNA binding / protein heterodimerization/ transcription factor

Coordinates

chrA02:-:25179412..25180604

Molecular Weight (calculated)

31723.0 Da

IEP (calculated)

5.050

GRAVY (calculated)

-0.559

Length

289 amino acids

Sequence
(BLAST)

001: MDGHTAKDIG MKKSASELAL QELLTKLLSR QESILDTSPL DPSFDLMNWD YTCELRDSLL KSEILTPAGL FIDAQSSICE NLSADSPVSA NKPEAKRAAR
101: GTVSVYTDDH SDEEDAETEA SQSEMTNDPN DVKRIRRMYS NRISARRSRQ RKQEQLADLE SQVDSLKGVN STLYKQLIDA TQQFRSAGTN NRVLKSDVET
201: LRVKVKLAED LIARGSLTSS LNQLLQTHLS PPQHSINSLH YTGNNTSPAI TVHSDQSLFP GITISGQNSS PGLGNVSSEA VSCVSDIWP

Best Arabidopsis Sequence Match ( AT5G24800.1 )
(BLAST)

001: MDNHTAKDIG MKRSASELAL QEYLTTSPLD PCFDLMNRDY TCELRDSLLW SEGLFPAGPF RDAQSSICEN LSADSPVSAN KPEVRGGVRR TTSGSSHVNS
101: DDEDAETEAG QSEMTNDPND LKRIRRMNSN RESAKRSRRR KQEYLVDLET QVDSLKGDNS TLYKQLIDAT QQFRSAGTNN RVLKSDVETL RVKVKLAEDL
201: VARGSLTSSL NQLLQTHLSP PSHSISSLHY TGNTSPAITV HSDQSLFPGM TLSGQNSSPG LGNVSSEAVS CVSDIWP

Arabidopsis Description

BZIP9Basic leucine zipper 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9FUD3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.