Factsheet for Bra003500.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000214.1-P
Bra002368.1-P
Bra003500.1-P
Bra003755.1-P
Bra006595.1-P
Bra007679.1-P
Bra008192.1-P
Bra009793.1-P
Bra010035.1-P
Bra011545.1-P
Bra015847.1-P
Bra017664.1-P
Bra018296.1-P
Bra019715.1-P
Bra020471.1-P
Bra024478.1-P
Bra026895.1-P
Bra026896.1-P
Bra033467.1-P
Bra034639.1-P
Bra037235.1-P
Bra039631.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G62420.1	Bra019715.1-P	AT1G13600.1	16709202
AT3G62420.1	Bra026895.1-P	AT1G13600.1	16709202
AT3G62420.1	Bra026896.1-P	AT1G13600.1	16709202
AT3G62420.1	Bra003755.1-P	AT1G75390.1	16709202
AT3G62420.1	Bra008192.1-P	AT1G75390.1	16709202
AT3G62420.1	Bra015847.1-P	AT1G75390.1	16709202
AT3G62420.1	Bra003755.1-P	AT1G75390.1	16810321
AT3G62420.1	Bra008192.1-P	AT1G75390.1	16810321
AT3G62420.1	Bra015847.1-P	AT1G75390.1	16810321
AT3G62420.1	Bra024478.1-P	AT2G18160.1	16709202
AT3G62420.1	Bra037235.1-P	AT2G18160.1	16709202
AT3G62420.1	Bra039631.1-P	AT2G18160.1	16709202
AT3G62420.1	Bra024478.1-P	AT2G18160.1	16810321
AT3G62420.1	Bra037235.1-P	AT2G18160.1	16810321
AT3G62420.1	Bra039631.1-P	AT2G18160.1	16810321
AT3G62420.1	Bra000214.1-P	AT2G41090.1	17360592
AT3G62420.1	Bra000214.1-P	AT2G41100.1	17360592
AT3G62420.1	Bra018296.1-P	AT3G51920.1	17360592
AT3G62420.1	Bra033467.1-P	AT3G51920.1	17360592
AT3G62420.1	Bra003500.1-P	AT3G62420.1	16709202
AT3G62420.1	Bra007679.1-P	AT3G62420.1	16709202
AT3G62420.1	Bra011545.1-P	AT4G34590.1	16709202
AT3G62420.1	Bra017664.1-P	AT4G34590.1	16709202
AT3G62420.1	Bra034639.1-P	AT4G34590.1	16709202
AT3G62420.1	Bra011545.1-P	AT4G34590.1	16810321
AT3G62420.1	Bra017664.1-P	AT4G34590.1	16810321
AT3G62420.1	Bra034639.1-P	AT4G34590.1	16810321
AT3G62420.1	Bra002368.1-P	AT5G21274.1	17360592
AT3G62420.1	Bra006595.1-P	AT5G21274.1	17360592
AT3G62420.1	Bra009793.1-P	AT5G24800.1	16709202
AT3G62420.1	Bra020471.1-P	AT5G24800.1	16709202
AT3G62420.1	Bra009793.1-P	AT5G24800.1	16810321
AT3G62420.1	Bra020471.1-P	AT5G24800.1	16810321
AT3G62420.1	Bra010035.1-P	AT5G49450.1	16709202

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY25111	Canola	nucleus	99.25	99.25
CDX67893	Canola	nucleus	98.51	98.51
Bra007679.1-P	Field mustard	nucleus	88.06	83.69
AT3G62420.1	Thale cress	nucleus	85.07	78.08
GSMUA_Achr11P...	Banana	nucleus	56.72	52.78
GSMUA_Achr8P22330_001	Banana	nucleus	55.22	51.39
GSMUA_Achr11P...	Banana	nucleus	52.24	50.36
KRH68258	Soybean	nucleus	55.97	50.0
KRG96525	Soybean	nucleus	55.97	50.0
PGSC0003DMT400018832	Potato	nucleus	51.49	47.92
GSMUA_Achr8P29960_001	Banana	nucleus	51.49	47.92
VIT_07s0005g01450.t01	Wine grape	nucleus	51.49	47.59
Solyc01g079480.2.1	Tomato	nucleus	50.0	46.53
Solyc06g009640.1.1	Tomato	nucleus	50.0	46.53
KRH69221	Soybean	nucleus	51.49	46.31
PGSC0003DMT400088166	Potato	nucleus	48.51	45.14
KRH31798	Soybean	nucleus	48.51	42.76
KRH65972	Soybean	nucleus	37.31	40.98
Bra034639.1-P	Field mustard	nucleus	39.55	37.32
Bra024478.1-P	Field mustard	nucleus	41.04	35.48
Bra039631.1-P	Field mustard	nucleus	44.03	35.12
Bra037235.1-P	Field mustard	nucleus, plastid	44.03	35.12
Bra008192.1-P	Field mustard	nucleus	41.79	33.94
Bra003755.1-P	Field mustard	nucleus	43.28	32.4
Bra017664.1-P	Field mustard	nucleus	35.82	31.37
Os09t0306400-01	Rice	nucleus	34.33	30.07
Bra011545.1-P	Field mustard	nucleus	39.55	29.61
TraesCS5A01G179000.1	Wheat	nucleus	31.34	27.27
TraesCS5D01G183500.1	Wheat	nucleus	31.34	27.27
HORVU5Hr1G054510.1	Barley	nucleus	31.34	27.27
EER96530	Sorghum	nucleus	32.09	27.04
TraesCS5B01G176700.1	Wheat	nucleus	30.6	26.8
Zm00001d005578_P001	Maize	nucleus	32.09	25.29
EES14897	Sorghum	nucleus, plastid	29.1	22.16
Zm00001d030577_P001	Maize	nucleus	25.37	21.52
Os08t0357300-01	Rice	cytosol	17.91	21.24
Bra015847.1-P	Field mustard	nucleus	38.06	14.25
Zm00001d020025_P001	Maize	endoplasmic reticulum, extracellular	11.94	13.22

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	EnsemblPlantsGene:Bra003500	EnsemblPlants:Bra003500.1	EnsemblPlants:Bra003500.1-P	ncoils:Coil
GO:GO:0003674	GO:GO:0003700	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR004827	UniProt:M4CH17	PFAM:PF00170	ScanProsite:PS00036
PFscan:PS50217	PANTHER:PTHR22952	PANTHER:PTHR22952:SF167	SMART:SM00338	SUPFAM:SSF57959	UniParc:UPI00025418E8
InterPro:bZIP	:	:	:	:	:

Description

AT3G62420 (E=1e-056) ATBZIP53 | ATBZIP53 (BASIC REGION/LEUCINE ZIPPER MOTIF 53); DNA binding / protein heterodimerization/ sequence-specific DNA binding / transcription factor

Coordinates

chrA07:-:13492043..13492447

Molecular Weight (calculated)

15476.4 Da

IEP (calculated)

7.265

GRAVY (calculated)

-0.909

Length

134 amino acids

Sequence
(BLAST)

001: MGSKSPDSDN DPRYASVTDE RKRKRMISNR ESARRSRMRK QKQLGDLINE VTVLKNDNAK ITEQVDAATR RYVEMESKND VLRAQEVELT ERLRSLNSVL
101: EMVEEISGQA LDIPEIQNPW QIPCPIMQTN HGFC

Best Arabidopsis Sequence Match ( AT3G62420.1 )
(BLAST)

001: MGSLQMQTSP ESDNDPRYAT VTDERKRKRM ISNRESARRS RMRKQKQLGD LINEVTLLKN DNAKITEQVD EASKKYIEME SKNNVLRAQA SELTDRLRSL
101: NSVLEMVEEI SGQALDIPEI PESMQNPWQM PCPMQPIRAS ADMFDC

Arabidopsis Description

BZIP53bZIP transcription factor 53 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZP8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.