Factsheet for Bra037235.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 6
plastid 4

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra003500.1-P
Bra003755.1-P
Bra007679.1-P
Bra008192.1-P
Bra009793.1-P
Bra010035.1-P
Bra011545.1-P
Bra015847.1-P
Bra017664.1-P
Bra020471.1-P
Bra024478.1-P
Bra034639.1-P
Bra037235.1-P
Bra039631.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G18160.1	Bra003755.1-P	AT1G75390.1	16709202
AT2G18160.1	Bra008192.1-P	AT1G75390.1	16709202
AT2G18160.1	Bra015847.1-P	AT1G75390.1	16709202
AT2G18160.1	Bra024478.1-P	AT2G18160.1	16709202
AT2G18160.1	Bra037235.1-P	AT2G18160.1	16709202
AT2G18160.1	Bra039631.1-P	AT2G18160.1	16709202
AT2G18160.1	Bra003500.1-P	AT3G62420.1	16709202
AT2G18160.1	Bra007679.1-P	AT3G62420.1	16709202
AT2G18160.1	Bra003500.1-P	AT3G62420.1	16810321
AT2G18160.1	Bra007679.1-P	AT3G62420.1	16810321
AT2G18160.1	Bra011545.1-P	AT4G34590.1	16709202
AT2G18160.1	Bra017664.1-P	AT4G34590.1	16709202
AT2G18160.1	Bra034639.1-P	AT4G34590.1	16709202
AT2G18160.1	Bra009793.1-P	AT5G24800.1	16709202
AT2G18160.1	Bra020471.1-P	AT5G24800.1	16709202
AT2G18160.1	Bra010035.1-P	AT5G49450.1	16709202

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY30327	Canola	nucleus, plastid	100.0	100.0
CDY53277	Canola	nucleus, plastid	98.21	98.21
Bra024478.1-P	Field mustard	nucleus	83.93	90.97
Bra039631.1-P	Field mustard	nucleus	89.88	89.88
AT2G18160.1	Thale cress	nucleus	86.9	85.38
VIT_04s0023g02430.t01	Wine grape	nucleus	46.43	49.68
Solyc03g033730.1.1	Tomato	nucleus	33.93	49.57
Bra034639.1-P	Field mustard	nucleus	41.07	48.59
Solyc02g084860.1.1	Tomato	nucleus	41.07	47.92
PGSC0003DMT400009068	Potato	nucleus	41.07	47.92
Bra017664.1-P	Field mustard	nucleus	42.26	46.41
KRH58937	Soybean	nucleus, plastid	44.05	45.4
PGSC0003DMT400040054	Potato	nucleus	35.12	44.7
Bra007679.1-P	Field mustard	nucleus	37.5	44.68
Bra003500.1-P	Field mustard	nucleus	35.12	44.03
Bra008192.1-P	Field mustard	nucleus	42.86	43.64
PGSC0003DMT400058187	Potato	nucleus	42.26	42.77
Bra011545.1-P	Field mustard	nucleus	44.05	41.34
Bra003755.1-P	Field mustard	nucleus	42.86	40.22
Os09t0306400-01	Rice	nucleus	35.71	39.22
EER96530	Sorghum	nucleus	35.12	37.11
TraesCS5A01G179000.1	Wheat	nucleus	32.74	35.71
HORVU5Hr1G054510.1	Barley	nucleus	32.74	35.71
TraesCS5D01G183500.1	Wheat	nucleus	32.74	35.71
KRH42848	Soybean	nucleus	44.05	35.58
TraesCS5B01G176700.1	Wheat	nucleus	32.14	35.29
Zm00001d005578_P001	Maize	nucleus	33.33	32.94
EES14897	Sorghum	nucleus, plastid	32.14	30.68
Zm00001d030577_P001	Maize	nucleus	28.57	30.38
Os08t0357300-01	Rice	cytosol	17.26	25.66
Zm00001d020025_P001	Maize	endoplasmic reticulum, extracellular	14.88	20.66
Bra015847.1-P	Field mustard	nucleus	39.29	18.44

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	EnsemblPlantsGene:Bra037235	EnsemblPlants:Bra037235.1	EnsemblPlants:Bra037235.1-P	ncoils:Coil
GO:GO:0003674	GO:GO:0003700	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR004827	UniProt:M4F824	PFAM:PF00170	ScanProsite:PS00036
PFscan:PS50217	PANTHER:PTHR22952	PANTHER:PTHR22952:SF229	SMART:SM00338	SUPFAM:SSF57959	UniParc:UPI0002541E72
InterPro:bZIP	SEG:seg	:	:	:	:

Description

AT2G18160 (E=6e-062) ATBZIP2, GBF5 | ATBZIP2 (ARABIDOPSIS THALIANA BASIC LEUCINE-ZIPPER 2); DNA binding / protein heterodimerization/ transcription factor

Coordinates

chrA09:-:4848866..4849372

Molecular Weight (calculated)

18497.6 Da

IEP (calculated)

4.916

GRAVY (calculated)

-0.630

Length

168 amino acids

Sequence
(BLAST)

001: MASSSSTYRS SSSSDGGNPS GSAVAVDDRK RKRMLSNRES ARRSRMRKQK HVDDLTAQIN QLSNDNRQIL TSLTVTTQLY TKIQAENSIL TAQMTELSTR
101: LESLNEIVDL VTATNGGVDQ IDGCGFDDRT VGINCDGYYD DMMSGVNPWG GSVYSNQPIM ANDMMNMY

Best Arabidopsis Sequence Match ( AT2G18160.1 )
(BLAST)

001: MASSSSTYRS SSSSDGGNNN PSDSVVTVDE RKRKRMLSNR ESARRSRMRK QKHVDDLTAQ INQLSNDNRQ ILNSLTVTSQ LYMKIQAENS VLTAQMEELS
101: TRLQSLNEIV DLVQSNGAGF GVDQIDGCGF DDRTVGIDGY YDDMNMMSNV NHWGGSVYTN QPIMANDINM Y

Arabidopsis Description

BZIP2bZIP transcription factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SI15]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.