Factsheet for Bra017664.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 3

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra003500.1-P
Bra003755.1-P
Bra007679.1-P
Bra008192.1-P
Bra009793.1-P
Bra010035.1-P
Bra011545.1-P
Bra015847.1-P
Bra017664.1-P
Bra018280.1-P
Bra019715.1-P
Bra020471.1-P
Bra024478.1-P
Bra026895.1-P
Bra026896.1-P
Bra034639.1-P
Bra037235.1-P
Bra039631.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G34590.1	Bra019715.1-P	AT1G13600.1	16709202
AT4G34590.1	Bra026895.1-P	AT1G13600.1	16709202
AT4G34590.1	Bra026896.1-P	AT1G13600.1	16709202
AT4G34590.1	Bra003755.1-P	AT1G75390.1	16709202
AT4G34590.1	Bra008192.1-P	AT1G75390.1	16709202
AT4G34590.1	Bra015847.1-P	AT1G75390.1	16709202
AT4G34590.1	Bra024478.1-P	AT2G18160.1	16709202
AT4G34590.1	Bra037235.1-P	AT2G18160.1	16709202
AT4G34590.1	Bra039631.1-P	AT2G18160.1	16709202
AT4G34590.1	Bra018280.1-P	AT2G31070.1	21245844
AT4G34590.1	Bra003500.1-P	AT3G62420.1	16709202
AT4G34590.1	Bra007679.1-P	AT3G62420.1	16709202
AT4G34590.1	Bra003500.1-P	AT3G62420.1	16810321
AT4G34590.1	Bra007679.1-P	AT3G62420.1	16810321
AT4G34590.1	Bra011545.1-P	AT4G34590.1	16709202
AT4G34590.1	Bra017664.1-P	AT4G34590.1	16709202
AT4G34590.1	Bra034639.1-P	AT4G34590.1	16709202
AT4G34590.1	Bra009793.1-P	AT5G24800.1	16709202
AT4G34590.1	Bra020471.1-P	AT5G24800.1	16709202
AT4G34590.1	Bra010035.1-P	AT5G49450.1	16709202

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY45319	Canola	nucleus	100.0	100.0
Bra034639.1-P	Field mustard	nucleus	78.43	84.51
AT4G34590.1	Thale cress	nucleus	84.97	81.76
Bra011545.1-P	Field mustard	nucleus	90.2	77.09
Solyc04g080740.1.1	Tomato	nucleus	49.02	51.02
PGSC0003DMT400009493	Potato	nucleus	49.67	50.67
KRH51803	Soybean	nucleus, plastid	48.37	48.37
KRH15149	Soybean	nucleus	51.63	47.59
KRH61129	Soybean	nucleus, plastid	47.06	47.06
Bra024478.1-P	Field mustard	nucleus	46.41	45.81
Bra008192.1-P	Field mustard	nucleus	47.06	43.64
Bra039631.1-P	Field mustard	nucleus	47.06	42.86
Bra037235.1-P	Field mustard	nucleus, plastid	46.41	42.26
KRH05862	Soybean	nucleus	51.63	41.15
Bra003755.1-P	Field mustard	nucleus	47.71	40.78
Os09t0306400-01	Rice	nucleus	39.22	39.22
EER96530	Sorghum	nucleus	40.52	38.99
Bra007679.1-P	Field mustard	nucleus	34.64	37.59
Bra003500.1-P	Field mustard	nucleus	31.37	35.82
TraesCS5B01G176700.1	Wheat	nucleus	35.29	35.29
TraesCS5D01G183500.1	Wheat	nucleus	35.29	35.06
TraesCS5A01G179000.1	Wheat	nucleus	35.29	35.06
HORVU5Hr1G054510.1	Barley	nucleus	34.64	34.42
Zm00001d005578_P001	Maize	nucleus	37.25	33.53
EES14897	Sorghum	nucleus, plastid	37.91	32.95
Zm00001d030577_P001	Maize	nucleus	32.68	31.65
Os08t0357300-01	Rice	cytosol	20.26	27.43
Zm00001d020025_P001	Maize	endoplasmic reticulum, extracellular	17.65	22.31
Bra015847.1-P	Field mustard	nucleus	43.79	18.72

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	EnsemblPlantsGene:Bra017664	EnsemblPlants:Bra017664.1	EnsemblPlants:Bra017664.1-P	ncoils:Coil
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR004827
UniProt:M4DMD1	PFAM:PF00170	ScanProsite:PS00036	PFscan:PS50217	PANTHER:PTHR22952	PANTHER:PTHR22952:SF229
SMART:SM00338	SUPFAM:SSF57959	UniParc:UPI0002541280	InterPro:bZIP	SEG:seg	:

Description

AT4G34590 (E=2e-055) ATB2, GBF6, AtbZIP11, BZIP11 | GBF6 (G-BOX BINDING FACTOR 6); DNA binding / protein heterodimerization/ transcription factor

Coordinates

chrA03:+:29596755..29597216

Molecular Weight (calculated)

17259.3 Da

IEP (calculated)

5.260

GRAVY (calculated)

-0.658

Length

153 amino acids

Sequence
(BLAST)

001: MDSSSSGTTS STIQTSSGPE ENLMEQRKRK RMLSNRESAR RSRKKKQKLL DDLTAQVNQL RKENSEIVTS VSITTQHYLT VEAENSVLRA QLDELSHRLE
101: SLNDIIGFLD NTNGICSNTL SGPESDDFLV SQFNMNMFYM NQPLMASSDA LLY

Best Arabidopsis Sequence Match ( AT4G34590.1 )
(BLAST)

001: MESSSSGTTS STIQTSSGSE ESLMEQRKRK RMLSNRESAR RSRMKKQKLL DDLTAQVNHL KKENTEIVTS VSITTQHYLT VEAENSVLRA QLDELNHRLQ
101: SLNDIIEFLD SSNNNNNNNM GMCSNPLVGL ECDDFFVNQM NMSYIMNQPL MASSDALMY

Arabidopsis Description

BZIP11bZIP transcription factor 11 [Source:UniProtKB/Swiss-Prot;Acc:O65683]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.