Factsheet for Bra010035.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000214.1-P
Bra002368.1-P
Bra003500.1-P
Bra003755.1-P
Bra006595.1-P
Bra007679.1-P
Bra008192.1-P
Bra009793.1-P
Bra010035.1-P
Bra011545.1-P
Bra015847.1-P
Bra017664.1-P
Bra018296.1-P
Bra019715.1-P
Bra020471.1-P
Bra020735.1-P
Bra024478.1-P
Bra025418.1-P
Bra026895.1-P
Bra026896.1-P
Bra027855.1-P
Bra033467.1-P
Bra034639.1-P
Bra037235.1-P
Bra039631.1-P
Bra039723.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G49450.1	Bra019715.1-P	AT1G13600.1	16709202
AT5G49450.1	Bra026895.1-P	AT1G13600.1	16709202
AT5G49450.1	Bra026896.1-P	AT1G13600.1	16709202
AT5G49450.1	Bra027855.1-P	AT1G59530.1	16709202
AT5G49450.1	Bra003755.1-P	AT1G75390.1	16709202
AT5G49450.1	Bra008192.1-P	AT1G75390.1	16709202
AT5G49450.1	Bra015847.1-P	AT1G75390.1	16709202
AT5G49450.1	Bra024478.1-P	AT2G18160.1	16709202
AT5G49450.1	Bra037235.1-P	AT2G18160.1	16709202
AT5G49450.1	Bra039631.1-P	AT2G18160.1	16709202
AT5G49450.1	Bra000214.1-P	AT2G41090.1	17360592
AT5G49450.1	Bra000214.1-P	AT2G41100.1	17360592
AT5G49450.1	Bra020735.1-P	AT3G30530.1	16709202
AT5G49450.1	Bra025418.1-P	AT3G30530.1	16709202
AT5G49450.1	Bra018296.1-P	AT3G51920.1	17360592
AT5G49450.1	Bra033467.1-P	AT3G51920.1	17360592
AT5G49450.1	Bra003500.1-P	AT3G62420.1	16709202
AT5G49450.1	Bra007679.1-P	AT3G62420.1	16709202
AT5G49450.1	Bra039723.1-P	AT4G14640.1	17360592
AT5G49450.1	Bra011545.1-P	AT4G34590.1	16709202
AT5G49450.1	Bra017664.1-P	AT4G34590.1	16709202
AT5G49450.1	Bra034639.1-P	AT4G34590.1	16709202
AT5G49450.1	Bra011545.1-P	AT4G34590.1	21245844
AT5G49450.1	Bra017664.1-P	AT4G34590.1	21245844
AT5G49450.1	Bra034639.1-P	AT4G34590.1	21245844
AT5G49450.1	Bra002368.1-P	AT5G21274.1	17360592
AT5G49450.1	Bra006595.1-P	AT5G21274.1	17360592
AT5G49450.1	Bra009793.1-P	AT5G24800.1	16709202
AT5G49450.1	Bra020471.1-P	AT5G24800.1	16709202
AT5G49450.1	Bra010035.1-P	AT5G49450.1	16709202

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX86233	Canola	nucleus	100.0	100.0
AT5G49450.1	Thale cress	nucleus	78.87	77.24

Protein Annotations

MapMan:15.5.4.1	EnsemblPlantsGene:Bra010035	EnsemblPlants:Bra010035.1	EnsemblPlants:Bra010035.1-P	ncoils:Coil	GO:GO:0000003
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355
GO:GO:0006521	GO:GO:0006950	GO:GO:0006970	GO:GO:0007154	GO:GO:0007165	GO:GO:0007275
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009267	GO:GO:0009605	GO:GO:0009607
GO:GO:0009617	GO:GO:0009628	GO:GO:0009651	GO:GO:0009791	GO:GO:0009901	GO:GO:0009908
GO:GO:0009987	GO:GO:0009991	GO:GO:0010182	GO:GO:0019725	GO:GO:0043565	GO:GO:0044212
GO:GO:0045893	GO:GO:0046982	GO:GO:0071333	InterPro:IPR004827	UniProt:M4D0N6	PFAM:PF07716
ScanProsite:PS00036	PFscan:PS50217	PANTHER:PTHR22952	PANTHER:PTHR22952:SF351	SMART:SM00338	SUPFAM:SSF57959
UniParc:UPI000253EECD	InterPro:bZIP	:	:	:	:

Description

AT5G49450 (E=1e-055) AtbZIP1 | AtbZIP1 (Arabidopsis thaliana basic leucine-zipper 1); DNA binding / protein heterodimerization/ transcription factor

Coordinates

chrA06:+:18760870..18761298

Molecular Weight (calculated)

16067.1 Da

IEP (calculated)

9.272

GRAVY (calculated)

-0.799

Length

142 amino acids

Sequence
(BLAST)

001: MANAEKTSSG SDIDEKKRKR KLSNRESARR SRLKKQKLME DTIIEISALE RRIKENTERC KVARRRLDSL ESENVALRSE KTWLLSYVSD LENMIATTSL
101: TLMHSGGDDE NVSVEIAAGD CRRGPMHEYG CGSLQTLASF KT

Best Arabidopsis Sequence Match ( AT5G49450.1 )
(BLAST)

001: MANAEKTSSG SDIDEKKRKR KLSNRESARR SRLKKQKLME DTIHEISSLE RRIKENSERC RAVKQRLDSV ETENAGLRSE KIWLSSYVSD LENMIATTSL
101: TLTQSGGGDC VDDQNANAGI AVGDCRRTPW KLSCGSLQPM ASFKT

Arabidopsis Description

BZIP1Basic leucine zipper 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FGX2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.