Factsheet for Bra025418.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 4

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000214.1-P
Bra003755.1-P
Bra008192.1-P
Bra010035.1-P
Bra015847.1-P
Bra019715.1-P
Bra020735.1-P
Bra025418.1-P
Bra026895.1-P
Bra026896.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G30530.1	Bra019715.1-P	AT1G13600.1	16709202
AT3G30530.1	Bra026895.1-P	AT1G13600.1	16709202
AT3G30530.1	Bra026896.1-P	AT1G13600.1	16709202
AT3G30530.1	Bra003755.1-P	AT1G75390.1	16709202
AT3G30530.1	Bra008192.1-P	AT1G75390.1	16709202
AT3G30530.1	Bra015847.1-P	AT1G75390.1	16709202
AT3G30530.1	Bra000214.1-P	AT2G41090.1	17360592
AT3G30530.1	Bra020735.1-P	AT3G30530.1	16709202
AT3G30530.1	Bra025418.1-P	AT3G30530.1	16709202
AT3G30530.1	Bra010035.1-P	AT5G49450.1	16709202

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT3G30530.1	Thale cress	nucleus	79.65	79.19
CDY66911	Canola	nucleus	78.49	78.49
Bra020735.1-P	Field mustard	nucleus	69.77	70.18
Bra026523.1-P	Field mustard	nucleus	27.33	52.81
PGSC0003DMT400003516	Potato	nucleus	50.0	47.78
Solyc02g089420.1.1	Tomato	nucleus	50.0	47.78
VIT_14s0083g00700.t01	Wine grape	nucleus	51.16	44.44
KRH01443	Soybean	nucleus	50.0	44.1
KRH45160	Soybean	nucleus	48.84	43.52
Bra008670.1-P	Field mustard	nucleus	44.19	41.53
KRH18312	Soybean	nucleus	50.58	40.65
Bra006324.1-P	Field mustard	nucleus	42.44	40.33
Bra025144.1-P	Field mustard	nucleus	39.53	40.0
KRG93749	Soybean	nucleus	51.16	40.0
Bra023540.1-P	Field mustard	nucleus	43.6	39.89
Bra026895.1-P	Field mustard	nucleus	44.19	38.97
Bra026896.1-P	Field mustard	nucleus	44.19	38.97
Bra019715.1-P	Field mustard	nucleus	43.6	38.86
Bra017359.1-P	Field mustard	nucleus	38.95	38.51
Bra038341.1-P	Field mustard	nucleus	26.74	38.33
Solyc03g046440.1.1	Tomato	nucleus	38.37	38.15
Bra029353.1-P	Field mustard	mitochondrion, nucleus	22.67	37.5
Zm00001d052807_P001	Maize	nucleus	29.65	36.17
GSMUA_Achr9P14690_001	Banana	nucleus	31.98	35.26
Os02t0728001-00	Rice	nucleus	32.56	33.14
EES07324	Sorghum	nucleus	32.56	33.14
GSMUA_Achr6P36230_001	Banana	nucleus	32.56	32.0
GSMUA_Achr8P23510_001	Banana	nucleus	29.65	31.68
Zm00001d017911_P001	Maize	nucleus	31.4	30.68
Zm00001d015664_P001	Maize	nucleus	29.65	30.36
GSMUA_Achr5P05350_001	Banana	nucleus	28.49	29.88
Os09t0474000-01	Rice	nucleus	29.65	29.48
Os02t0191600-00	Rice	nucleus	33.72	29.15
Zm00001d051739_P001	Maize	nucleus	24.42	28.0
TraesCS6D01G160200.1	Wheat	nucleus	28.49	27.84
EES06428	Sorghum	nucleus	28.49	27.68
TraesCS6A01G170600.1	Wheat	nucleus	28.49	27.68
TraesCS6B01G198700.1	Wheat	nucleus	28.49	27.68
Zm00001d005962_P001	Maize	nucleus, plastid	26.16	27.44
TraesCS7B01G293900.1	Wheat	nucleus	26.16	26.95
TraesCS5A01G250400.1	Wheat	nucleus	30.23	26.53
Bra013005.1-P	Field mustard	nucleus	27.91	26.37
TraesCS7B01G293700.1	Wheat	nucleus	25.58	26.35
HORVU7Hr1G043080.1	Barley	nucleus	29.65	26.29
HORVU5Hr1G070540.1	Barley	nucleus	29.07	26.04
TraesCS5D01G258000.1	Wheat	nucleus	29.07	25.91
EER96905	Sorghum	nucleus	27.91	25.81
Bra005971.1-P	Field mustard	nucleus	23.84	25.62
TraesCS7A01G211500.1	Wheat	nucleus	27.33	25.41
TraesCS5B01G248400.1	Wheat	nucleus	28.49	25.39
TraesCS6D01G270000.1	Wheat	nucleus	29.07	25.13
TraesCS7D01G213200.1	Wheat	nucleus	26.74	25.0
HORVU2Hr1G098530.1	Barley	nucleus	25.58	24.86
HORVU1Hr1G013620.1	Barley	nucleus	26.16	24.73
Zm00001d020823_P001	Maize	nucleus	27.91	24.62
HORVU6Hr1G072490.1	Barley	nucleus	27.91	24.49
TraesCS7B01G118500.1	Wheat	nucleus	26.16	24.46
TraesCS6B01G318700.1	Wheat	nucleus	29.07	24.15
Bra035957.1-P	Field mustard	nucleus	25.58	23.91
TraesCS7A01G181100.1	Wheat	nucleus	29.65	23.5
TraesCS6A01G288900.1	Wheat	nucleus	27.91	23.3
Zm00001d031272_P001	Maize	nucleus	27.33	23.27
KXG25724	Sorghum	nucleus	30.81	22.94
Zm00001d053703_P001	Maize	nucleus	23.26	22.73
TraesCS7D01G182900.1	Wheat	nucleus	29.07	22.62
HORVU6Hr1G034810.1	Barley	nucleus	27.91	22.43
KXG19789	Sorghum	nucleus	24.42	22.34
HORVU7Hr1G037230.2	Barley	nucleus	28.49	22.07
Os08t0487100-01	Rice	nucleus	29.07	21.74
TraesCS7B01G086100.1	Wheat	nucleus	27.91	21.52
KXG20422	Sorghum	nucleus	23.84	20.71
Zm00001d037360_P001	Maize	nucleus	23.26	20.2
Zm00001d046664_P001	Maize	nucleus	20.93	19.25
TraesCS7A01G391800.1	Wheat	mitochondrion	23.84	16.94

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	EnsemblPlantsGene:Bra025418	EnsemblPlants:Bra025418.1	EnsemblPlants:Bra025418.1-P	ncoils:Coil
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR004827
UniProt:M4E9G2	PFAM:PF00170	ScanProsite:PS00036	PFscan:PS50217	PANTHER:PTHR22952	PANTHER:PTHR22952:SF349
SMART:SM00338	SUPFAM:SSF57959	UniParc:UPI000253FA63	InterPro:bZIP	SEG:seg	:

Description

AT3G30530 (E=3e-065) ATBZIP42 | ATBZIP42 (ARABIDOPSIS THALIANA BASIC LEUCINE-ZIPPER 42); DNA binding / protein heterodimerization/ protein homodimerization/ transcription factor

Coordinates

chrA06:-:21628959..21629477

Molecular Weight (calculated)

20149.5 Da

IEP (calculated)

5.733

GRAVY (calculated)

-1.016

Length

172 amino acids

Sequence
(BLAST)

001: MQPQTDVFSL QNYLNSSIPS PYPSHFQISS PFPINGQNPN SFYGFQNATN NPQSMSLSSN NSTSDEAEEQ QTDKNIINER KQRRMISNRE SARRSRMRKQ
101: RRLDELWSQV MWLRIENHQL LDKLNNLSES HEKVLQENAQ LKEETSELKQ VISDMQIQSP FSCFRDDIIP IE

Best Arabidopsis Sequence Match ( AT3G30530.1 )
(BLAST)

001: MQPQTDVFSL HNYLNSSILQ SPYPSNFPIS TPFPTNGQNP YLLYGFQSPT NNPQSMSLSS NNSTSDEAEE QQTNNNIINE RKQRRMISNR ESARRSRMRK
101: QRHLDELWSQ VMWLRIENHQ LLDKLNNLSE SHDKVLQENA QLKEETFELK QVISDMQIQS PFSCFRDDII PIE

Arabidopsis Description

ATBZIP42BZIP42 [Source:UniProtKB/TrEMBL;Acc:A0A178VMH2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.