Factsheet for Bra026523.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra019715.1-P
Bra026895.1-P
Bra026896.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G04038.1	Bra019715.1-P	AT1G13600.1	16709202
AT2G04038.1	Bra026895.1-P	AT1G13600.1	16709202
AT2G04038.1	Bra026896.1-P	AT1G13600.1	16709202

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX99780	Canola	nucleus	100.0	49.72
CDY46496	Canola	nucleus	94.38	46.93
AT2G04038.1	Thale cress	nucleus	79.78	42.77
Bra025144.1-P	Field mustard	nucleus	74.16	38.82
Bra017359.1-P	Field mustard	nucleus	75.28	38.51
Bra038341.1-P	Field mustard	nucleus	46.07	34.17
Bra019715.1-P	Field mustard	nucleus	68.54	31.61
Bra029353.1-P	Field mustard	mitochondrion, nucleus	35.96	30.77
Bra026896.1-P	Field mustard	nucleus	65.17	29.74
Bra026895.1-P	Field mustard	nucleus	65.17	29.74
VIT_01s0010g00930.t01	Wine grape	nucleus	61.8	28.21
Bra025418.1-P	Field mustard	nucleus	52.81	27.33
PGSC0003DMT400019465	Potato	nucleus	59.55	27.32
Bra020735.1-P	Field mustard	nucleus	51.69	26.9
KRH75199	Soybean	nucleus	59.55	26.77
KRH71054	Soybean	nucleus	59.55	26.63
Bra023540.1-P	Field mustard	nucleus	55.06	26.06
Solyc04g005170.1.1	Tomato	nucleus	55.06	25.65
Bra006324.1-P	Field mustard	nucleus	51.69	25.41
GSMUA_Achr9P14690_001	Banana	nucleus	43.82	25.0
Zm00001d052807_P001	Maize	nucleus	39.33	24.82
Bra008670.1-P	Field mustard	nucleus	50.56	24.59
GSMUA_Achr5P05350_001	Banana	nucleus	44.94	24.39
PGSC0003DMT400004821	Potato	nucleus	52.81	24.23
EES07324	Sorghum	nucleus	43.82	23.08
GSMUA_Achr8P23510_001	Banana	nucleus	41.57	22.98
Zm00001d017911_P001	Maize	nucleus	43.82	22.16
TraesCS6B01G198700.1	Wheat	nucleus	43.82	22.03
GSMUA_Achr6P36230_001	Banana	nucleus	42.7	21.71
TraesCS6D01G160200.1	Wheat	nucleus	42.7	21.59
Os09t0474000-01	Rice	nucleus	41.57	21.39
Zm00001d005962_P001	Maize	nucleus, plastid	39.33	21.34
Os02t0728001-00	Rice	nucleus	40.45	21.3
TraesCS7B01G293900.1	Wheat	nucleus	39.33	20.96
TraesCS6D01G270000.1	Wheat	nucleus	46.07	20.6
EER96905	Sorghum	nucleus	42.7	20.43
TraesCS7B01G293700.1	Wheat	nucleus	38.2	20.36
TraesCS6A01G170600.1	Wheat	nucleus	40.45	20.34
TraesCS6B01G318700.1	Wheat	nucleus	47.19	20.29
Bra005971.1-P	Field mustard	nucleus	35.96	20.0
HORVU6Hr1G072490.1	Barley	nucleus	43.82	19.9
HORVU2Hr1G098530.1	Barley	nucleus	39.33	19.77
Zm00001d015664_P001	Maize	nucleus	37.08	19.64
TraesCS7B01G118500.1	Wheat	nucleus	40.45	19.57
TraesCS7D01G213200.1	Wheat	nucleus	40.45	19.57
HORVU5Hr1G070540.1	Barley	nucleus	41.57	19.27
EES06428	Sorghum	nucleus	38.2	19.21
TraesCS5B01G248400.1	Wheat	nucleus	41.57	19.17
TraesCS6A01G288900.1	Wheat	nucleus	43.82	18.93
TraesCS7A01G211500.1	Wheat	nucleus	39.33	18.92
Zm00001d051739_P001	Maize	nucleus	31.46	18.67
TraesCS5D01G258000.1	Wheat	nucleus	40.45	18.65
Os02t0191600-00	Rice	nucleus	41.57	18.59
HORVU7Hr1G043080.1	Barley	nucleus	40.45	18.56
Zm00001d020823_P001	Maize	nucleus	40.45	18.46
TraesCS5A01G250400.1	Wheat	nucleus	40.45	18.37
Zm00001d031272_P001	Maize	nucleus	41.57	18.32
Zm00001d053703_P001	Maize	nucleus	35.96	18.18
HORVU1Hr1G013620.1	Barley	nucleus	37.08	18.13
KXG19789	Sorghum	nucleus	38.2	18.09
HORVU6Hr1G034810.1	Barley	nucleus	42.7	17.76
Bra013005.1-P	Field mustard	nucleus	35.96	17.58
Zm00001d037360_P001	Maize	nucleus	38.2	17.17
Os08t0487100-01	Rice	nucleus	43.82	16.96
TraesCS7D01G182900.1	Wheat	nucleus	41.57	16.74
KXG20422	Sorghum	nucleus	37.08	16.67
Zm00001d046664_P001	Maize	nucleus	34.83	16.58
KXG25724	Sorghum	nucleus	42.7	16.45
TraesCS7A01G181100.1	Wheat	nucleus	39.33	16.13
Bra035957.1-P	Field mustard	nucleus	32.58	15.76
TraesCS7B01G086100.1	Wheat	nucleus	39.33	15.7
HORVU7Hr1G037230.2	Barley	nucleus	38.2	15.32
TraesCS7A01G391800.1	Wheat	mitochondrion	38.2	14.05

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	EnsemblPlantsGene:Bra026523	EnsemblPlants:Bra026523.1	EnsemblPlants:Bra026523.1-P	ncoils:Coil
GO:GO:0003674	GO:GO:0003700	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR004827	UniProt:M4ECL3	PFAM:PF00170	PFscan:PS50217
PANTHER:PTHR22952	PANTHER:PTHR22952:SF133	SMART:SM00338	SUPFAM:SSF57959	UniParc:UPI00025464DF	InterPro:bZIP
SEG:seg	:	:	:	:	:

Description

AT2G04038 (E=3e-033) AtbZIP48 | AtbZIP48 (Arabidopsis thaliana basic leucine-zipper 48); DNA binding / transcription factor

Coordinates

chrA02:-:19908706..19908975

Molecular Weight (calculated)

10617.5 Da

IEP (calculated)

9.433

GRAVY (calculated)

-1.219

Length

89 amino acids

Sequence
(BLAST)

1: MLSNRESARR SRMRKQRHLD ELWSQVIRLR NENNCLIDKL NRVSETQDSV LKENSKLKEE ASELRQLVCE LKSNKNSDDD NNFVRKLSE

Best Arabidopsis Sequence Match ( AT2G04038.1 )
(BLAST)

001: MIPAEINGYF QYLSPEYNVI NMPSSPTSSL NYLNDLIINN NNYSSSSNSQ DLMISNNSTS DEDHHQSIMV LDERKQRRML SNRESARRSR MRKQRHLDEL
101: WSQVIRLRNE NNCLIDKLNR VSETQNCVLK ENSKLKEEAS DLRQLVCELK SNKNNNNSFP REFEDN

Arabidopsis Description

AtbZIP48BZIP48 [Source:UniProtKB/TrEMBL;Acc:A0A178VS52]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.