Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra026523.1-P | Field mustard | nucleus | 42.77 | 79.78 |
| CDY71548 | Canola | nucleus | 68.67 | 67.06 |
| CDY48072 | Canola | nucleus | 68.07 | 66.47 |
| Bra025144.1-P | Field mustard | nucleus | 68.07 | 66.47 |
| Bra017359.1-P | Field mustard | nucleus | 68.07 | 64.94 |
| CDY33124 | Canola | nucleus | 67.47 | 63.64 |
| CDY04169 | Canola | nucleus | 67.47 | 63.64 |
| CDY46496 | Canola | nucleus | 65.66 | 60.89 |
| CDX99780 | Canola | nucleus | 65.06 | 60.34 |
| AT1G13600.1 | Thale cress | nucleus | 58.43 | 49.49 |
| VIT_01s0010g00930.t01 | Wine grape | nucleus | 47.59 | 40.51 |
| PGSC0003DMT400019465 | Potato | nucleus | 46.39 | 39.69 |
| AT3G30530.1 | Thale cress | nucleus | 40.96 | 39.31 |
| Solyc04g005170.1.1 | Tomato | nucleus | 44.58 | 38.74 |
| AT5G15830.1 | Thale cress | nucleus | 41.57 | 37.1 |
| KRH75199 | Soybean | nucleus | 43.37 | 36.36 |
| PGSC0003DMT400004821 | Potato | nucleus | 42.17 | 36.08 |
| GSMUA_Achr9P14690_001 | Banana | nucleus | 33.73 | 35.9 |
| AT5G38800.1 | Thale cress | nucleus | 35.54 | 35.76 |
| KRH71054 | Soybean | nucleus | 42.77 | 35.68 |
| AT1G68880.1 | Thale cress | nucleus | 29.52 | 35.51 |
| Zm00001d052807_P001 | Maize | nucleus | 28.31 | 33.33 |
| GSMUA_Achr8P23510_001 | Banana | nucleus | 30.12 | 31.06 |
| Os02t0728001-00 | Rice | nucleus | 31.33 | 30.77 |
| EES07324 | Sorghum | nucleus | 30.72 | 30.18 |
| Os09t0474000-01 | Rice | nucleus | 31.33 | 30.06 |
| GSMUA_Achr5P05350_001 | Banana | nucleus | 29.52 | 29.88 |
| TraesCS7B01G293900.1 | Wheat | nucleus | 28.31 | 28.14 |
| Zm00001d005962_P001 | Maize | nucleus, plastid | 27.71 | 28.05 |
| Zm00001d015664_P001 | Maize | nucleus | 28.31 | 27.98 |
| TraesCS6D01G270000.1 | Wheat | nucleus | 33.13 | 27.64 |
| Zm00001d017911_P001 | Maize | nucleus | 28.92 | 27.27 |
| AT5G08141.1 | Thale cress | nucleus | 22.29 | 27.01 |
| TraesCS6A01G170600.1 | Wheat | nucleus | 28.31 | 26.55 |
| GSMUA_Achr6P36230_001 | Banana | nucleus | 27.71 | 26.29 |
| TraesCS6D01G160200.1 | Wheat | nucleus | 27.71 | 26.14 |
| Os02t0191600-00 | Rice | nucleus | 31.33 | 26.13 |
| TraesCS7D01G213200.1 | Wheat | nucleus | 28.92 | 26.09 |
| TraesCS5A01G250400.1 | Wheat | nucleus | 30.72 | 26.02 |
| Zm00001d051739_P001 | Maize | nucleus | 23.49 | 26.0 |
| EES06428 | Sorghum | nucleus | 27.71 | 25.99 |
| TraesCS6B01G198700.1 | Wheat | nucleus | 27.71 | 25.99 |
| HORVU1Hr1G013620.1 | Barley | nucleus | 28.31 | 25.82 |
| TraesCS6A01G288900.1 | Wheat | nucleus | 31.93 | 25.73 |
| Zm00001d053703_P001 | Maize | nucleus | 27.11 | 25.57 |
| TraesCS7B01G118500.1 | Wheat | nucleus | 28.31 | 25.54 |
| HORVU5Hr1G070540.1 | Barley | nucleus | 29.52 | 25.52 |
| HORVU6Hr1G072490.1 | Barley | nucleus | 30.12 | 25.51 |
| TraesCS5B01G248400.1 | Wheat | nucleus | 29.52 | 25.39 |
| EER96905 | Sorghum | nucleus | 28.31 | 25.27 |
| TraesCS6B01G318700.1 | Wheat | nucleus | 31.33 | 25.12 |
| TraesCS7A01G211500.1 | Wheat | nucleus | 27.71 | 24.86 |
| HORVU2Hr1G098530.1 | Barley | nucleus | 26.51 | 24.86 |
| TraesCS7B01G293700.1 | Wheat | nucleus | 24.7 | 24.55 |
| TraesCS5D01G258000.1 | Wheat | nucleus | 28.31 | 24.35 |
| Zm00001d031272_P001 | Maize | nucleus | 29.52 | 24.26 |
| TraesCS7A01G181100.1 | Wheat | nucleus | 31.33 | 23.96 |
| TraesCS7D01G182900.1 | Wheat | nucleus | 31.33 | 23.53 |
| Zm00001d020823_P001 | Maize | nucleus | 27.11 | 23.08 |
| HORVU7Hr1G043080.1 | Barley | nucleus | 26.51 | 22.68 |
| HORVU6Hr1G034810.1 | Barley | nucleus | 28.31 | 21.96 |
| KXG19789 | Sorghum | nucleus | 24.7 | 21.81 |
| Os08t0487100-01 | Rice | nucleus | 30.12 | 21.74 |
| KXG25724 | Sorghum | nucleus | 30.12 | 21.64 |
| Zm00001d046664_P001 | Maize | nucleus | 24.1 | 21.39 |
| AT5G60830.1 | Thale cress | nucleus | 26.51 | 21.36 |
| Zm00001d037360_P001 | Maize | nucleus | 25.3 | 21.21 |
| KXG20422 | Sorghum | nucleus | 25.3 | 21.21 |
| TraesCS7B01G086100.1 | Wheat | nucleus | 28.31 | 21.08 |
| HORVU7Hr1G037230.2 | Barley | nucleus | 27.71 | 20.72 |
| TraesCS7A01G391800.1 | Wheat | mitochondrion | 25.3 | 17.36 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | EntrezGene:814936 | UniProt:A0A178VS52 | ProteinID:AAM15441.1 | ProteinID:AEC05787.1 |
| ArrayExpress:AT2G04038 | EnsemblPlantsGene:AT2G04038 | RefSeq:AT2G04038 | TAIR:AT2G04038 | RefSeq:AT2G04038-TAIR-G | EnsemblPlants:AT2G04038.1 |
| TAIR:AT2G04038.1 | Symbol:AtbZIP48 | ProteinID:BAH30383.1 | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:IPR004827 | RefSeq:NP_178489.1 | ProteinID:OAP09290.1 | PFAM:PF00170 | PO:PO:0007616 |
| PO:PO:0009005 | PO:PO:0009030 | PO:PO:0025281 | ScanProsite:PS00036 | PFscan:PS50217 | PANTHER:PTHR22952 |
| PANTHER:PTHR22952:SF133 | UniProt:Q8RU59 | SMART:SM00338 | SUPFAM:SSF57959 | UniParc:UPI00000A6016 | InterPro:bZIP |
| SEG:seg | : | : | : | : | : |
Description
AtbZIP48BZIP48 [Source:UniProtKB/TrEMBL;Acc:A0A178VS52]
Coordinates
chr2:+:1331919..1332419
Molecular Weight (calculated)
19502.7 Da
IEP (calculated)
6.780
GRAVY (calculated)
-1.043
Length
166 amino acids
Sequence
(BLAST)
(BLAST)
001: MIPAEINGYF QYLSPEYNVI NMPSSPTSSL NYLNDLIINN NNYSSSSNSQ DLMISNNSTS DEDHHQSIMV LDERKQRRML SNRESARRSR MRKQRHLDEL
101: WSQVIRLRNE NNCLIDKLNR VSETQNCVLK ENSKLKEEAS DLRQLVCELK SNKNNNNSFP REFEDN
101: WSQVIRLRNE NNCLIDKLNR VSETQNCVLK ENSKLKEEAS DLRQLVCELK SNKNNNNSFP REFEDN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.