Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G04038.1 | CDX98108 | AT1G13600.1 | 16709202 |
| AT2G04038.1 | CDY16099 | AT1G13600.1 | 16709202 |
| AT2G04038.1 | CDY37559 | AT1G13600.1 | 16709202 |
| AT2G04038.1 | CDY45336 | AT1G13600.1 | 16709202 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX99780 | Canola | nucleus | 94.41 | 94.41 |
| Bra026523.1-P | Field mustard | nucleus | 46.93 | 94.38 |
| CDY71548 | Canola | nucleus | 73.18 | 77.06 |
| CDY48072 | Canola | nucleus | 72.63 | 76.47 |
| CDY33124 | Canola | nucleus | 72.07 | 73.3 |
| CDY04169 | Canola | nucleus | 72.07 | 73.3 |
| AT2G04038.1 | Thale cress | nucleus | 60.89 | 65.66 |
| CDY45336 | Canola | nucleus | 62.01 | 56.06 |
| CDY37559 | Canola | nucleus | 60.89 | 55.05 |
| CDX98108 | Canola | nucleus | 60.89 | 55.05 |
| CDY16099 | Canola | nucleus | 43.02 | 47.24 |
| CDY45843 | Canola | nucleus | 28.49 | 42.5 |
| CDX81569 | Canola | nucleus | 27.93 | 41.67 |
| CDY35775 | Canola | nucleus | 37.99 | 39.77 |
| PGSC0003DMT400019465 | Potato | nucleus | 43.02 | 39.69 |
| CDX85297 | Canola | nucleus | 37.99 | 39.53 |
| VIT_01s0010g00930.t01 | Wine grape | nucleus | 43.02 | 39.49 |
| CDY66911 | Canola | nucleus | 36.87 | 38.37 |
| KRH71054 | Soybean | nucleus | 40.78 | 36.68 |
| Solyc04g005170.1.1 | Tomato | nucleus | 38.55 | 36.13 |
| KRH75199 | Soybean | nucleus | 39.66 | 35.86 |
| CDX70656 | Canola | nucleus | 37.43 | 35.26 |
| CDX85530 | Canola | nucleus | 36.87 | 35.11 |
| PGSC0003DMT400004821 | Potato | nucleus | 37.99 | 35.05 |
| CDX69495 | Canola | nucleus | 35.75 | 34.97 |
| CDX78655 | Canola | nucleus | 37.43 | 34.72 |
| CDY26467 | Canola | nucleus | 35.2 | 34.43 |
| GSMUA_Achr8P23510_001 | Banana | nucleus | 30.73 | 34.16 |
| GSMUA_Achr9P14690_001 | Banana | nucleus | 29.61 | 33.97 |
| CDX90970 | Canola | nucleus | 36.31 | 33.51 |
| CDX70639 | Canola | nucleus | 35.75 | 33.33 |
| EES07324 | Sorghum | nucleus | 30.17 | 31.95 |
| Zm00001d052807_P001 | Maize | nucleus | 24.58 | 31.21 |
| GSMUA_Achr5P05350_001 | Banana | nucleus | 28.49 | 31.1 |
| Os02t0728001-00 | Rice | nucleus | 27.93 | 29.59 |
| Zm00001d015664_P001 | Maize | nucleus | 27.37 | 29.17 |
| Zm00001d017911_P001 | Maize | nucleus | 28.49 | 28.98 |
| TraesCS7B01G118500.1 | Wheat | nucleus | 29.61 | 28.8 |
| TraesCS6D01G270000.1 | Wheat | nucleus | 31.84 | 28.64 |
| TraesCS6B01G318700.1 | Wheat | nucleus | 32.96 | 28.5 |
| TraesCS7D01G213200.1 | Wheat | nucleus | 29.05 | 28.26 |
| TraesCS7B01G293900.1 | Wheat | nucleus | 26.26 | 28.14 |
| TraesCS7A01G211500.1 | Wheat | nucleus | 29.05 | 28.11 |
| GSMUA_Achr6P36230_001 | Banana | nucleus | 27.37 | 28.0 |
| Os09t0474000-01 | Rice | nucleus | 26.82 | 27.75 |
| HORVU6Hr1G072490.1 | Barley | nucleus | 30.17 | 27.55 |
| TraesCS6B01G198700.1 | Wheat | nucleus | 26.82 | 27.12 |
| Zm00001d005962_P001 | Maize | nucleus, plastid | 24.58 | 26.83 |
| Zm00001d051739_P001 | Maize | nucleus | 22.35 | 26.67 |
| TraesCS7B01G293700.1 | Wheat | nucleus | 24.58 | 26.35 |
| HORVU7Hr1G043080.1 | Barley | nucleus | 28.49 | 26.29 |
| TraesCS6A01G288900.1 | Wheat | nucleus | 30.17 | 26.21 |
| TraesCS6D01G160200.1 | Wheat | nucleus | 25.7 | 26.14 |
| Os02t0191600-00 | Rice | nucleus | 29.05 | 26.13 |
| HORVU5Hr1G070540.1 | Barley | nucleus | 27.93 | 26.04 |
| HORVU1Hr1G013620.1 | Barley | nucleus | 26.26 | 25.82 |
| HORVU2Hr1G098530.1 | Barley | nucleus | 25.14 | 25.42 |
| TraesCS5B01G248400.1 | Wheat | nucleus | 27.37 | 25.39 |
| KXG19789 | Sorghum | nucleus | 26.26 | 25.0 |
| TraesCS6A01G170600.1 | Wheat | nucleus | 24.58 | 24.86 |
| TraesCS5A01G250400.1 | Wheat | nucleus | 26.82 | 24.49 |
| EES06428 | Sorghum | nucleus | 24.02 | 24.29 |
| Zm00001d037360_P001 | Maize | nucleus | 26.82 | 24.24 |
| Zm00001d020823_P001 | Maize | nucleus | 26.26 | 24.1 |
| EER96905 | Sorghum | nucleus | 24.58 | 23.66 |
| TraesCS5D01G258000.1 | Wheat | nucleus | 25.14 | 23.32 |
| Zm00001d053703_P001 | Maize | nucleus | 22.91 | 23.3 |
| Zm00001d031272_P001 | Maize | nucleus | 26.26 | 23.27 |
| CDY66792 | Canola | nucleus | 21.23 | 23.17 |
| TraesCS7A01G181100.1 | Wheat | nucleus | 27.93 | 23.04 |
| TraesCS7D01G182900.1 | Wheat | nucleus | 27.93 | 22.62 |
| CDY40812 | Canola | nucleus | 22.35 | 22.6 |
| Zm00001d046664_P001 | Maize | nucleus | 23.46 | 22.46 |
| Os08t0487100-01 | Rice | nucleus | 28.49 | 22.17 |
| CDY42835 | Canola | nucleus | 21.79 | 22.03 |
| HORVU6Hr1G034810.1 | Barley | nucleus | 26.26 | 21.96 |
| CDY02193 | Canola | nucleus | 22.35 | 21.86 |
| CDX78324 | Canola | nucleus | 20.67 | 21.76 |
| CDY51629 | Canola | nucleus | 22.91 | 21.69 |
| KXG25724 | Sorghum | nucleus | 27.93 | 21.64 |
| CDX70638 | Canola | nucleus | 19.55 | 21.6 |
| KXG20422 | Sorghum | nucleus | 22.91 | 20.71 |
| CDX87188 | Canola | nucleus | 24.58 | 20.18 |
| CDX70640 | Canola | nucleus | 17.88 | 20.13 |
| TraesCS7B01G086100.1 | Wheat | nucleus | 24.58 | 19.73 |
| HORVU7Hr1G037230.2 | Barley | nucleus | 24.02 | 19.37 |
| TraesCS7A01G391800.1 | Wheat | mitochondrion | 25.7 | 19.01 |
| CDY16837 | Canola | nucleus | 22.91 | 18.55 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | GO:A0A078I9F3 | UniProt:A0A078I9F3 | EnsemblPlants:CDY46496 | ProteinID:CDY46496 |
| ProteinID:CDY46496.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00084097001 | InterPro:IPR004827 |
| PFAM:PF00170 | ScanProsite:PS00036 | PFscan:PS50217 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF133 | SMART:SM00338 |
| SUPFAM:SSF57959 | UniParc:UPI0004EECABC | InterPro:bZIP | SEG:seg | : | : |
Description
BnaA02g27460DBnaA02g27460D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I9F3]
Coordinates
chrLK032671:+:40794..41333
Molecular Weight (calculated)
20896.4 Da
IEP (calculated)
6.797
GRAVY (calculated)
-0.994
Length
179 amino acids
Sequence
(BLAST)
(BLAST)
001: MIPAEITGYY QYLSPENLGT LPTEFNIINM PSSPTSSSSL TYLNDLINNN YSSSSIRQDL MMGNNSTSDE DHQHHHHQSI IIVDERKQRR MLSNRESARR
101: SRMRKQRHLD ELWSQVIRLR NENNCLIDKL NRVSETQDSV LKENSKLKEE ASELRQLVCE LKSNKNSDDD NNFVRKLSE
101: SRMRKQRHLD ELWSQVIRLR NENNCLIDKL NRVSETQDSV LKENSKLKEE ASELRQLVCE LKSNKNSDDD NNFVRKLSE
001: MIPAEINGYF QYLSPEYNVI NMPSSPTSSL NYLNDLIINN NNYSSSSNSQ DLMISNNSTS DEDHHQSIMV LDERKQRRML SNRESARRSR MRKQRHLDEL
101: WSQVIRLRNE NNCLIDKLNR VSETQNCVLK ENSKLKEEAS DLRQLVCELK SNKNNNNSFP REFEDN
101: WSQVIRLRNE NNCLIDKLNR VSETQNCVLK ENSKLKEEAS DLRQLVCELK SNKNNNNSFP REFEDN
Arabidopsis Description
AtbZIP48BZIP48 [Source:UniProtKB/TrEMBL;Acc:A0A178VS52]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.