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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 2
PPI

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G13600.1 HORVU1Hr1G013620.1 AT1G13600.1 16709202
AT1G13600.1 HORVU2Hr1G098530.1 AT1G13600.1 16709202
AT1G13600.1 HORVU5Hr1G070540.1 AT1G13600.1 16709202
AT1G13600.1 HORVU6Hr1G034810.1 AT1G13600.1 16709202
AT1G13600.1 HORVU6Hr1G072490.1 AT1G13600.1 16709202
AT1G13600.1 HORVU7Hr1G037230.2 AT1G13600.1 16709202
AT1G13600.1 HORVU7Hr1G043080.1 AT1G13600.1 16709202
AT1G13600.1 HORVU1Hr1G013620.1 AT2G04038.1 16709202
AT1G13600.1 HORVU2Hr1G098530.1 AT2G04038.1 16709202
AT1G13600.1 HORVU5Hr1G070540.1 AT2G04038.1 16709202
AT1G13600.1 HORVU6Hr1G034810.1 AT2G04038.1 16709202
AT1G13600.1 HORVU6Hr1G072490.1 AT2G04038.1 16709202
AT1G13600.1 HORVU7Hr1G037230.2 AT2G04038.1 16709202
AT1G13600.1 HORVU7Hr1G043080.1 AT2G04038.1 16709202
AT1G13600.1 HORVU1Hr1G013620.1 AT3G30530.1 16709202
AT1G13600.1 HORVU2Hr1G098530.1 AT3G30530.1 16709202
AT1G13600.1 HORVU5Hr1G070540.1 AT3G30530.1 16709202
AT1G13600.1 HORVU6Hr1G034810.1 AT3G30530.1 16709202
AT1G13600.1 HORVU6Hr1G072490.1 AT3G30530.1 16709202
AT1G13600.1 HORVU7Hr1G037230.2 AT3G30530.1 16709202
AT1G13600.1 HORVU7Hr1G043080.1 AT3G30530.1 16709202
AT1G13600.1 HORVU5Hr1G054510.1 AT3G62420.1 16709202
AT1G13600.1 HORVU5Hr1G054510.1 AT4G34590.1 16709202
AT2G04038.1 HORVU1Hr1G013620.1 AT1G13600.1 16709202
AT2G04038.1 HORVU2Hr1G098530.1 AT1G13600.1 16709202
AT2G04038.1 HORVU5Hr1G070540.1 AT1G13600.1 16709202
AT2G04038.1 HORVU6Hr1G034810.1 AT1G13600.1 16709202
AT2G04038.1 HORVU6Hr1G072490.1 AT1G13600.1 16709202
AT2G04038.1 HORVU7Hr1G037230.2 AT1G13600.1 16709202
AT2G04038.1 HORVU7Hr1G043080.1 AT1G13600.1 16709202
AT3G30530.1 HORVU1Hr1G013620.1 AT1G13600.1 16709202
AT3G30530.1 HORVU2Hr1G098530.1 AT1G13600.1 16709202
AT3G30530.1 HORVU5Hr1G070540.1 AT1G13600.1 16709202
AT3G30530.1 HORVU6Hr1G034810.1 AT1G13600.1 16709202
AT3G30530.1 HORVU6Hr1G072490.1 AT1G13600.1 16709202
AT3G30530.1 HORVU7Hr1G037230.2 AT1G13600.1 16709202
AT3G30530.1 HORVU7Hr1G043080.1 AT1G13600.1 16709202
AT3G30530.1 HORVU5Hr1G054510.1 AT1G75390.1 16709202
AT3G30530.1 HORVU0Hr1G001280.1 AT2G41090.1 17360592
AT3G30530.1 HORVU2Hr1G016740.4 AT2G41090.1 17360592
AT3G30530.1 HORVU3Hr1G038010.1 AT2G41090.1 17360592
AT3G30530.1 HORVU3Hr1G079210.4 AT2G41090.1 17360592
AT3G30530.1 HORVU4Hr1G026290.3 AT2G41090.1 17360592
AT3G30530.1 HORVU5Hr1G014060.1 AT2G41090.1 17360592
AT3G30530.1 HORVU5Hr1G014070.2 AT2G41090.1 17360592
AT3G30530.1 HORVU5Hr1G044710.4 AT2G41090.1 17360592
AT3G30530.1 HORVU1Hr1G013620.1 AT3G30530.1 16709202
AT3G30530.1 HORVU2Hr1G098530.1 AT3G30530.1 16709202
AT3G30530.1 HORVU5Hr1G070540.1 AT3G30530.1 16709202
AT3G30530.1 HORVU6Hr1G034810.1 AT3G30530.1 16709202
AT3G30530.1 HORVU6Hr1G072490.1 AT3G30530.1 16709202
AT3G30530.1 HORVU7Hr1G037230.2 AT3G30530.1 16709202
AT3G30530.1 HORVU7Hr1G043080.1 AT3G30530.1 16709202
AT5G15830.1 HORVU0Hr1G001280.1 AT2G41090.1 17360592
AT5G15830.1 HORVU2Hr1G016740.4 AT2G41090.1 17360592
AT5G15830.1 HORVU3Hr1G038010.1 AT2G41090.1 17360592
AT5G15830.1 HORVU3Hr1G079210.4 AT2G41090.1 17360592
AT5G15830.1 HORVU4Hr1G026290.3 AT2G41090.1 17360592
AT5G15830.1 HORVU5Hr1G014060.1 AT2G41090.1 17360592
AT5G15830.1 HORVU5Hr1G014070.2 AT2G41090.1 17360592
AT5G15830.1 HORVU5Hr1G044710.4 AT2G41090.1 17360592
AT5G15830.1 HORVU0Hr1G001280.1 AT2G41100.1 17360592
AT5G15830.1 HORVU2Hr1G016740.4 AT2G41100.1 17360592
AT5G15830.1 HORVU3Hr1G038010.1 AT2G41100.1 17360592
AT5G15830.1 HORVU3Hr1G079210.4 AT2G41100.1 17360592
AT5G15830.1 HORVU4Hr1G026290.3 AT2G41100.1 17360592
AT5G15830.1 HORVU5Hr1G014060.1 AT2G41100.1 17360592
AT5G15830.1 HORVU5Hr1G014070.2 AT2G41100.1 17360592
AT5G15830.1 HORVU5Hr1G044710.4 AT2G41100.1 17360592
AT5G15830.1 HORVU0Hr1G001280.1 AT5G21274.1 17360592
AT5G15830.1 HORVU2Hr1G016740.4 AT5G21274.1 17360592
AT5G15830.1 HORVU3Hr1G038010.1 AT5G21274.1 17360592
AT5G15830.1 HORVU3Hr1G079210.4 AT5G21274.1 17360592
AT5G15830.1 HORVU4Hr1G026290.3 AT5G21274.1 17360592
AT5G15830.1 HORVU5Hr1G014060.1 AT5G21274.1 17360592
AT5G15830.1 HORVU5Hr1G014070.2 AT5G21274.1 17360592
AT5G15830.1 HORVU5Hr1G044710.4 AT5G21274.1 17360592
AT5G38800.1 HORVU0Hr1G001280.1 AT2G41090.1 17360592
AT5G38800.1 HORVU2Hr1G016740.4 AT2G41090.1 17360592
AT5G38800.1 HORVU3Hr1G038010.1 AT2G41090.1 17360592
AT5G38800.1 HORVU3Hr1G079210.4 AT2G41090.1 17360592
AT5G38800.1 HORVU4Hr1G026290.3 AT2G41090.1 17360592
AT5G38800.1 HORVU5Hr1G014060.1 AT2G41090.1 17360592
AT5G38800.1 HORVU5Hr1G014070.2 AT2G41090.1 17360592
AT5G38800.1 HORVU5Hr1G044710.4 AT2G41090.1 17360592
AT5G38800.1 HORVU0Hr1G001280.1 AT2G41100.1 17360592
AT5G38800.1 HORVU2Hr1G016740.4 AT2G41100.1 17360592
AT5G38800.1 HORVU3Hr1G038010.1 AT2G41100.1 17360592
AT5G38800.1 HORVU3Hr1G079210.4 AT2G41100.1 17360592
AT5G38800.1 HORVU4Hr1G026290.3 AT2G41100.1 17360592
AT5G38800.1 HORVU5Hr1G014060.1 AT2G41100.1 17360592
AT5G38800.1 HORVU5Hr1G014070.2 AT2G41100.1 17360592
AT5G38800.1 HORVU5Hr1G044710.4 AT2G41100.1 17360592
AT5G38800.1 HORVU0Hr1G001280.1 AT5G21274.1 17360592
AT5G38800.1 HORVU2Hr1G016740.4 AT5G21274.1 17360592
AT5G38800.1 HORVU3Hr1G038010.1 AT5G21274.1 17360592
AT5G38800.1 HORVU3Hr1G079210.4 AT5G21274.1 17360592
AT5G38800.1 HORVU4Hr1G026290.3 AT5G21274.1 17360592
AT5G38800.1 HORVU5Hr1G014060.1 AT5G21274.1 17360592
AT5G38800.1 HORVU5Hr1G014070.2 AT5G21274.1 17360592
AT5G38800.1 HORVU5Hr1G044710.4 AT5G21274.1 17360592
AT5G38800.1 HORVU1Hr1G013620.1 AT5G38800.1 17719007
AT5G38800.1 HORVU2Hr1G098530.1 AT5G38800.1 17719007
AT5G38800.1 HORVU5Hr1G070540.1 AT5G38800.1 17719007
AT5G38800.1 HORVU6Hr1G034810.1 AT5G38800.1 17719007
AT5G38800.1 HORVU6Hr1G072490.1 AT5G38800.1 17719007
AT5G38800.1 HORVU7Hr1G037230.2 AT5G38800.1 17719007
AT5G38800.1 HORVU7Hr1G043080.1 AT5G38800.1 17719007
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU6Hr1G072490.1 Barley nucleus 64.84 60.2
HORVU2Hr1G098530.1 Barley nucleus 57.14 58.76
TraesCS6D01G270000.1 Wheat nucleus 57.14 52.26
TraesCS6A01G288900.1 Wheat nucleus 52.75 46.6
TraesCS6B01G318700.1 Wheat nucleus 50.0 43.96
Bra026523.1-P Field mustard nucleus 18.13 37.08
GSMUA_Achr9P14690_001 Banana nucleus 31.32 36.54
GSMUA_Achr8P23510_001 Banana nucleus 30.77 34.78
CDX81569 Canola nucleus 22.53 34.17
CDY45843 Canola nucleus 22.53 34.17
Bra038341.1-P Field mustard nucleus 22.53 34.17
GSMUA_Achr6P36230_001 Banana nucleus 31.87 33.14
GSMUA_Achr5P05350_001 Banana nucleus 26.37 29.27
HORVU7Hr1G043080.1 Barley nucleus 30.22 28.35
AT2G04038.1 Thale cress nucleus 25.82 28.31
AT1G68880.1 Thale cress nucleus 21.43 28.26
HORVU5Hr1G070540.1 Barley nucleus 29.67 28.12
CDX85297 Canola nucleus 26.37 27.91
Solyc03g046440.1.1 Tomato nucleus 26.37 27.75
AT3G30530.1 Thale cress nucleus 26.37 27.75
CDY16099 Canola nucleus 24.73 27.61
HORVU7Hr1G037230.2 Barley nucleus 33.52 27.48
CDX99780 Canola nucleus 26.92 27.37
AT5G38800.1 Thale cress nucleus 24.73 27.27
PGSC0003DMT400003516 Potato nucleus 26.92 27.22
CDY71548 Canola nucleus 25.27 27.06
CDY48072 Canola nucleus 25.27 27.06
Bra025144.1-P Field mustard nucleus 25.27 27.06
CDY35775 Canola nucleus 25.27 26.9
KRH75199 Soybean nucleus 29.12 26.77
VIT_14s0083g00700.t01 Wine grape nucleus 29.12 26.77
Solyc02g089420.1.1 Tomato nucleus 26.37 26.67
KRH01443 Soybean nucleus 28.57 26.67
Bra020735.1-P Field mustard nucleus 24.73 26.32
CDY46496 Canola nucleus 25.82 26.26
Bra025418.1-P Field mustard nucleus 24.73 26.16
CDY66911 Canola nucleus 24.73 26.16
CDY04169 Canola nucleus 25.27 26.14
CDY33124 Canola nucleus 25.27 26.14
KRH45160 Soybean nucleus 27.47 25.91
PGSC0003DMT400019465 Potato nucleus 27.47 25.77
AT1G13600.1 Thale cress nucleus 27.47 25.51
Bra006324.1-P Field mustard nucleus 25.27 25.41
Bra017359.1-P Field mustard nucleus 24.18 25.29
Bra026895.1-P Field mustard nucleus 26.92 25.13
VIT_01s0010g00930.t01 Wine grape nucleus 26.92 25.13
Bra026896.1-P Field mustard nucleus 26.92 25.13
KRH71054 Soybean nucleus 27.47 25.13
Bra029353.1-P Field mustard mitochondrion, nucleus 14.29 25.0
KRH18312 Soybean nucleus 29.12 24.77
PGSC0003DMT400004821 Potato nucleus 25.27 23.71
KRG93749 Soybean nucleus 28.57 23.64
Solyc04g005170.1.1 Tomato nucleus 24.73 23.56
Bra019715.1-P Field mustard nucleus 24.73 23.32
CDY45336 Canola nucleus 25.27 23.23
CDX85530 Canola nucleus 23.63 22.87
Bra023540.1-P Field mustard nucleus 23.63 22.87
CDY37559 Canola nucleus 24.73 22.73
CDX98108 Canola nucleus 24.73 22.73
AT5G15830.1 Thale cress nucleus 23.08 22.58
Bra008670.1-P Field mustard nucleus 22.53 22.4
CDX69495 Canola nucleus 22.53 22.4
CDX78655 Canola nucleus 23.63 22.28
CDX70656 Canola nucleus 23.08 22.11
CDX70639 Canola nucleus 23.08 21.88
CDY26467 Canola nucleus 21.98 21.86
CDX90970 Canola nucleus 23.08 21.65
Bra005971.1-P Field mustard nucleus 18.68 21.25
Bra013005.1-P Field mustard nucleus 20.33 20.33
HORVU6Hr1G034810.1 Barley nucleus 23.63 20.09
CDY02193 Canola nucleus 19.23 19.13
CDY40812 Canola nucleus 18.13 18.64
CDY42835 Canola nucleus 18.13 18.64
Bra035957.1-P Field mustard nucleus 18.68 18.48
AT5G08141.1 Thale cress nucleus 13.74 18.25
CDY51629 Canola nucleus 18.68 17.99
AT5G60830.1 Thale cress nucleus 20.33 17.96
CDY66792 Canola nucleus 15.93 17.68
KRH56749 Soybean nucleus 20.33 17.29
CDX78324 Canola nucleus 15.38 16.47
KRH63157 Soybean nucleus 14.84 16.17
CDX87188 Canola nucleus 18.13 15.14
CDY16837 Canola nucleus 18.13 14.93
KRH03190 Soybean cytosol, mitochondrion 7.69 13.46
CDX70638 Canola nucleus 10.99 12.35
CDX70640 Canola nucleus 10.44 11.95
Protein Annotations
Gene3D:1.20.5.170MapMan:15.5.4.1UniProt:A0A287EP45ncoils:CoilGO:GO:0003674GO:GO:0003700
GO:GO:0006139GO:GO:0006355GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987
EnsemblPlantsGene:HORVU1Hr1G013620EnsemblPlants:HORVU1Hr1G013620.1InterPro:IPR004827PFAM:PF00170ScanProsite:PS00036PFscan:PS50217
PANTHER:PTHR22952PANTHER:PTHR22952:SF363SMART:SM00338SUPFAM:SSF57959UniParc:UPI000B477C9AInterPro:bZIP
SEG:seg:::::
Description
No Description!
Coordinates
chrchr1H:+:36444369..36444976
Molecular Weight (calculated)
20519.0 Da
IEP (calculated)
8.017
GRAVY (calculated)
-0.779
Length
182 amino acids
Sequence
(BLAST)
001: PDTPSCQRAV PDGRGCEPAI TAAFKPHYQV VAPDDLVFPY NGGGLLVPQV TSSPSSSSYH QQQQHDVVAQ LLHEAAGGGA LLPFGNRSSN SDESDEYQQA
101: HCSLAEERRR RRMVSNRESA WRSRMRKQKQ LSELWAQVVH LHGANHQLLD QLNRVIRDCE RLLRDNAGFR DERAKLREPF LP
Best Arabidopsis Sequence Match ( AT3G30530.1 )
(BLAST)
001: MQPQTDVFSL HNYLNSSILQ SPYPSNFPIS TPFPTNGQNP YLLYGFQSPT NNPQSMSLSS NNSTSDEAEE QQTNNNIINE RKQRRMISNR ESARRSRMRK
101: QRHLDELWSQ VMWLRIENHQ LLDKLNNLSE SHDKVLQENA QLKEETFELK QVISDMQIQS PFSCFRDDII PIE
Arabidopsis Description
ATBZIP42BZIP42 [Source:UniProtKB/TrEMBL;Acc:A0A178VMH2]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.