Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc02g089420.1.1 | Tomato | nucleus | 95.56 | 95.56 |
| CDX85297 | Canola | nucleus | 50.56 | 52.91 |
| VIT_14s0083g00700.t01 | Wine grape | nucleus | 57.78 | 52.53 |
| CDY66911 | Canola | nucleus | 49.44 | 51.74 |
| AT3G30530.1 | Thale cress | nucleus | 49.44 | 51.45 |
| KRH01443 | Soybean | nucleus | 55.56 | 51.28 |
| KRH45160 | Soybean | nucleus | 54.44 | 50.78 |
| Bra025418.1-P | Field mustard | nucleus | 47.78 | 50.0 |
| CDY35775 | Canola | nucleus | 46.11 | 48.54 |
| Bra020735.1-P | Field mustard | nucleus | 45.56 | 47.95 |
| KRH18312 | Soybean | nucleus | 54.44 | 45.79 |
| AT5G38800.1 | Thale cress | nucleus | 41.67 | 45.45 |
| KRG93749 | Soybean | nucleus | 53.89 | 44.09 |
| CDX69495 | Canola | nucleus | 43.33 | 42.62 |
| CDY26467 | Canola | nucleus | 43.33 | 42.62 |
| Bra023540.1-P | Field mustard | nucleus | 44.44 | 42.55 |
| CDX85530 | Canola | nucleus | 44.44 | 42.55 |
| Bra008670.1-P | Field mustard | nucleus | 42.78 | 42.08 |
| AT5G15830.1 | Thale cress | nucleus | 43.33 | 41.94 |
| PGSC0003DMT400019465 | Potato | nucleus | 45.0 | 41.75 |
| PGSC0003DMT400004821 | Potato | nucleus | 45.0 | 41.75 |
| Bra006324.1-P | Field mustard | nucleus | 41.11 | 40.88 |
| CDX90970 | Canola | nucleus | 43.33 | 40.21 |
| CDX70656 | Canola | nucleus | 41.67 | 39.47 |
| CDX78655 | Canola | nucleus | 42.22 | 39.38 |
| GSMUA_Achr8P23510_001 | Banana | nucleus | 35.0 | 39.13 |
| GSMUA_Achr9P14690_001 | Banana | nucleus | 33.89 | 39.1 |
| Os02t0728001-00 | Rice | nucleus | 36.67 | 39.05 |
| CDX70639 | Canola | nucleus | 41.11 | 38.54 |
| EES07324 | Sorghum | nucleus | 33.33 | 35.5 |
| GSMUA_Achr6P36230_001 | Banana | nucleus | 33.89 | 34.86 |
| Zm00001d017911_P001 | Maize | nucleus | 33.89 | 34.66 |
| Zm00001d051739_P001 | Maize | nucleus | 27.78 | 33.33 |
| Zm00001d052807_P001 | Maize | nucleus | 25.56 | 32.62 |
| Os09t0474000-01 | Rice | nucleus | 28.89 | 30.06 |
| TraesCS7B01G293900.1 | Wheat | nucleus | 27.78 | 29.94 |
| EES06428 | Sorghum | nucleus | 28.89 | 29.38 |
| TraesCS7B01G293700.1 | Wheat | nucleus | 27.22 | 29.34 |
| TraesCS6D01G270000.1 | Wheat | nucleus | 32.22 | 29.15 |
| CDX70638 | Canola | nucleus | 26.11 | 29.01 |
| TraesCS6B01G318700.1 | Wheat | nucleus | 33.33 | 28.99 |
| TraesCS7D01G213200.1 | Wheat | nucleus | 29.44 | 28.8 |
| GSMUA_Achr5P05350_001 | Banana | nucleus | 26.11 | 28.66 |
| HORVU6Hr1G072490.1 | Barley | nucleus | 31.11 | 28.57 |
| Zm00001d015664_P001 | Maize | nucleus | 26.67 | 28.57 |
| TraesCS5B01G248400.1 | Wheat | nucleus | 30.56 | 28.5 |
| EER96905 | Sorghum | nucleus | 29.44 | 28.49 |
| TraesCS6D01G160200.1 | Wheat | nucleus | 27.78 | 28.41 |
| TraesCS7B01G118500.1 | Wheat | nucleus | 28.89 | 28.26 |
| TraesCS5A01G250400.1 | Wheat | nucleus | 30.56 | 28.06 |
| Zm00001d020823_P001 | Maize | nucleus | 30.0 | 27.69 |
| TraesCS6B01G198700.1 | Wheat | nucleus | 27.22 | 27.68 |
| HORVU5Hr1G070540.1 | Barley | nucleus | 29.44 | 27.6 |
| TraesCS7A01G211500.1 | Wheat | nucleus | 28.33 | 27.57 |
| Zm00001d005962_P001 | Maize | nucleus, plastid | 25.0 | 27.44 |
| TraesCS7D01G182900.1 | Wheat | nucleus | 33.33 | 27.15 |
| HORVU1Hr1G013620.1 | Barley | nucleus | 27.22 | 26.92 |
| TraesCS7A01G181100.1 | Wheat | nucleus | 32.22 | 26.73 |
| Os02t0191600-00 | Rice | nucleus | 29.44 | 26.63 |
| HORVU2Hr1G098530.1 | Barley | nucleus | 26.11 | 26.55 |
| CDX70640 | Canola | nucleus | 23.33 | 26.42 |
| Zm00001d031272_P001 | Maize | nucleus | 29.44 | 26.24 |
| TraesCS6A01G288900.1 | Wheat | nucleus | 30.0 | 26.21 |
| Zm00001d053703_P001 | Maize | nucleus | 25.56 | 26.14 |
| HORVU7Hr1G037230.2 | Barley | nucleus | 32.22 | 26.13 |
| TraesCS6A01G170600.1 | Wheat | nucleus | 25.56 | 25.99 |
| TraesCS5D01G258000.1 | Wheat | nucleus | 27.78 | 25.91 |
| HORVU7Hr1G043080.1 | Barley | nucleus | 27.78 | 25.77 |
| TraesCS7B01G086100.1 | Wheat | nucleus | 31.67 | 25.56 |
| KXG25724 | Sorghum | nucleus | 32.78 | 25.54 |
| KXG19789 | Sorghum | nucleus | 26.11 | 25.0 |
| Zm00001d037360_P001 | Maize | nucleus | 27.22 | 24.75 |
| Os08t0487100-01 | Rice | nucleus | 30.0 | 23.48 |
| HORVU6Hr1G034810.1 | Barley | nucleus | 27.22 | 22.9 |
| KXG20422 | Sorghum | nucleus | 24.44 | 22.22 |
| Zm00001d046664_P001 | Maize | nucleus | 21.67 | 20.86 |
| TraesCS7A01G391800.1 | Wheat | mitochondrion | 26.11 | 19.42 |
Protein Annotations
| Gene3D:1.20.5.170 | EntrezGene:102594601 | MapMan:15.5.4.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR004827 | UniProt:M0ZLT8 | PFAM:PF00170 |
| EnsemblPlantsGene:PGSC0003DMG400001387 | PGSC:PGSC0003DMG400001387 | EnsemblPlants:PGSC0003DMT400003516 | ScanProsite:PS00036 | PFscan:PS50217 | PANTHER:PTHR22952 |
| PANTHER:PTHR22952:SF365 | SMART:SM00338 | SUPFAM:SSF57959 | UniParc:UPI00029613FD | RefSeq:XP_006338314.1 | InterPro:bZIP |
Description
Ocs element-binding factor [Source:PGSC_GENE;Acc:PGSC0003DMG400001387]
Coordinates
chr2:-:45154900..45155735
Molecular Weight (calculated)
21057.5 Da
IEP (calculated)
5.603
GRAVY (calculated)
-0.974
Length
180 amino acids
Sequence
(BLAST)
(BLAST)
001: MQPTDVTDFY YLLPSNPTQF PSQSCVNYNP STFQLNTLLN PLYHLQITPQ VQDLNPQLTC FNSNSTSDEA DEQQWTLINE RKQRRMISNR ESARRSRMRK
101: QRHLDELWAQ VVWLRNENHQ LLDKLNHDSE RHDQVLQENA QLKNEASELR QMIAGMQFSS PCPSSRALEN EPCSGLPQND
101: QRHLDELWAQ VVWLRNENHQ LLDKLNHDSE RHDQVLQENA QLKNEASELR QMIAGMQFSS PCPSSRALEN EPCSGLPQND
001: MQPQTDVFSL HNYLNSSILQ SPYPSNFPIS TPFPTNGQNP YLLYGFQSPT NNPQSMSLSS NNSTSDEAEE QQTNNNIINE RKQRRMISNR ESARRSRMRK
101: QRHLDELWSQ VMWLRIENHQ LLDKLNNLSE SHDKVLQENA QLKEETFELK QVISDMQIQS PFSCFRDDII PIE
101: QRHLDELWSQ VMWLRIENHQ LLDKLNNLSE SHDKVLQENA QLKEETFELK QVISDMQIQS PFSCFRDDII PIE
Arabidopsis Description
ATBZIP42BZIP42 [Source:UniProtKB/TrEMBL;Acc:A0A178VMH2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.