Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G181100.1 | Wheat | nucleus | 76.47 | 77.88 |
| HORVU7Hr1G037230.2 | Barley | nucleus | 64.25 | 63.96 |
| TraesCS7B01G086100.1 | Wheat | nucleus | 63.8 | 63.23 |
| Os08t0487100-01 | Rice | nucleus | 58.37 | 56.09 |
| Zm00001d052807_P001 | Maize | nucleus | 33.94 | 53.19 |
| KXG25724 | Sorghum | nucleus | 53.85 | 51.52 |
| Zm00001d031272_P001 | Maize | nucleus | 45.25 | 49.51 |
| TraesCS5D01G258000.1 | Wheat | nucleus | 42.53 | 48.7 |
| Bra026523.1-P | Field mustard | nucleus | 16.74 | 41.57 |
| GSMUA_Achr9P14690_001 | Banana | nucleus | 28.96 | 41.03 |
| GSMUA_Achr8P23510_001 | Banana | nucleus | 29.86 | 40.99 |
| Bra038341.1-P | Field mustard | nucleus | 21.72 | 40.0 |
| CDY45843 | Canola | nucleus | 21.72 | 40.0 |
| CDX81569 | Canola | nucleus | 20.36 | 37.5 |
| GSMUA_Achr5P05350_001 | Banana | nucleus | 27.6 | 37.2 |
| TraesCS6D01G270000.1 | Wheat | nucleus | 33.03 | 36.68 |
| GSMUA_Achr6P36230_001 | Banana | nucleus | 28.96 | 36.57 |
| TraesCS7D01G213200.1 | Wheat | nucleus | 30.32 | 36.41 |
| Solyc02g089420.1.1 | Tomato | nucleus | 27.6 | 33.89 |
| TraesCS6D01G160200.1 | Wheat | nucleus | 26.7 | 33.52 |
| PGSC0003DMT400003516 | Potato | nucleus | 27.15 | 33.33 |
| CDX85297 | Canola | nucleus | 25.34 | 32.56 |
| AT1G68880.1 | Thale cress | nucleus | 19.91 | 31.88 |
| CDY66911 | Canola | nucleus | 24.43 | 31.4 |
| AT2G04038.1 | Thale cress | nucleus | 23.53 | 31.33 |
| AT3G30530.1 | Thale cress | nucleus | 23.98 | 30.64 |
| CDY16099 | Canola | nucleus | 22.17 | 30.06 |
| Bra020735.1-P | Field mustard | nucleus | 23.08 | 29.82 |
| CDY35775 | Canola | nucleus | 22.62 | 29.24 |
| Bra025418.1-P | Field mustard | nucleus | 22.62 | 29.07 |
| Solyc03g046440.1.1 | Tomato | nucleus | 22.62 | 28.9 |
| CDY48072 | Canola | nucleus | 22.17 | 28.82 |
| Bra025144.1-P | Field mustard | nucleus | 22.17 | 28.82 |
| Solyc04g005170.1.1 | Tomato | nucleus | 24.89 | 28.8 |
| Bra017359.1-P | Field mustard | nucleus | 22.62 | 28.74 |
| VIT_01s0010g00930.t01 | Wine grape | nucleus | 25.34 | 28.72 |
| CDY33124 | Canola | nucleus | 22.62 | 28.41 |
| CDY04169 | Canola | nucleus | 22.62 | 28.41 |
| CDY71548 | Canola | nucleus | 21.72 | 28.24 |
| CDY46496 | Canola | nucleus | 22.62 | 27.93 |
| Bra029353.1-P | Field mustard | mitochondrion, nucleus | 13.12 | 27.88 |
| AT5G38800.1 | Thale cress | nucleus | 20.81 | 27.88 |
| Bra008670.1-P | Field mustard | nucleus | 23.08 | 27.87 |
| PGSC0003DMT400019465 | Potato | nucleus | 24.43 | 27.84 |
| KRH75199 | Soybean | nucleus | 24.89 | 27.78 |
| VIT_14s0083g00700.t01 | Wine grape | nucleus | 24.89 | 27.78 |
| CDX99780 | Canola | nucleus | 22.17 | 27.37 |
| CDX69495 | Canola | nucleus | 22.62 | 27.32 |
| CDX85530 | Canola | nucleus | 23.08 | 27.13 |
| Bra023540.1-P | Field mustard | nucleus | 23.08 | 27.13 |
| KRH45160 | Soybean | nucleus | 23.53 | 26.94 |
| Bra006324.1-P | Field mustard | nucleus | 21.72 | 26.52 |
| Bra019715.1-P | Field mustard | nucleus | 23.08 | 26.42 |
| AT5G15830.1 | Thale cress | nucleus | 22.17 | 26.34 |
| CDX90970 | Canola | nucleus | 23.08 | 26.29 |
| KRH01443 | Soybean | nucleus | 23.08 | 26.15 |
| AT1G13600.1 | Thale cress | nucleus | 23.08 | 26.02 |
| PGSC0003DMT400004821 | Potato | nucleus | 22.62 | 25.77 |
| CDY45336 | Canola | nucleus | 23.08 | 25.76 |
| CDY37559 | Canola | nucleus | 23.08 | 25.76 |
| CDX98108 | Canola | nucleus | 23.08 | 25.76 |
| CDY26467 | Canola | nucleus | 21.27 | 25.68 |
| Bra026895.1-P | Field mustard | nucleus | 22.62 | 25.64 |
| Bra026896.1-P | Field mustard | nucleus | 22.62 | 25.64 |
| CDX70656 | Canola | nucleus | 21.27 | 24.74 |
| KRH71054 | Soybean | nucleus | 22.17 | 24.62 |
| CDX78655 | Canola | nucleus | 21.27 | 24.35 |
| CDX70639 | Canola | nucleus | 20.81 | 23.96 |
| KRH18312 | Soybean | nucleus | 23.08 | 23.83 |
| CDY40812 | Canola | nucleus | 19.0 | 23.73 |
| Bra013005.1-P | Field mustard | nucleus | 19.46 | 23.63 |
| Bra035957.1-P | Field mustard | nucleus | 19.46 | 23.37 |
| AT5G60830.1 | Thale cress | nucleus | 21.72 | 23.3 |
| CDY02193 | Canola | nucleus | 19.0 | 22.95 |
| KRG93749 | Soybean | nucleus | 22.62 | 22.73 |
| CDY42835 | Canola | nucleus | 18.1 | 22.6 |
| CDY51629 | Canola | nucleus | 18.55 | 21.69 |
| AT5G08141.1 | Thale cress | nucleus | 13.12 | 21.17 |
| Bra005971.1-P | Field mustard | nucleus | 14.93 | 20.62 |
| KRH56749 | Soybean | nucleus | 19.91 | 20.56 |
| CDX87188 | Canola | nucleus | 19.91 | 20.18 |
| CDY66792 | Canola | nucleus | 14.93 | 20.12 |
| CDX78324 | Canola | nucleus | 14.93 | 19.41 |
| KRH03190 | Soybean | cytosol, mitochondrion | 9.05 | 19.23 |
| CDY16837 | Canola | nucleus | 19.0 | 19.0 |
| KRH63157 | Soybean | nucleus | 11.76 | 15.57 |
| CDX70638 | Canola | nucleus | 9.95 | 13.58 |
| CDX70640 | Canola | nucleus | 9.5 | 13.21 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR004827 |
| PFAM:PF00170 | ScanProsite:PS00036 | PFscan:PS50217 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF191 | SMART:SM00338 |
| SUPFAM:SSF57959 | EnsemblPlantsGene:TraesCS7D01G182900 | EnsemblPlants:TraesCS7D01G182900.1 | InterPro:bZIP | TIGR:cd14702 | SEG:seg |
Description
No Description!
Coordinates
chr7D:-:136252999..136253664
Molecular Weight (calculated)
23821.6 Da
IEP (calculated)
8.133
GRAVY (calculated)
-0.715
Length
221 amino acids
Sequence
(BLAST)
(BLAST)
001: MYHHNSGEVA SFHFLPPPNP SSSFTTHHHM NMALPPQAYF PPSFDPAALL AGDDDVAAAF EFDTILLEEA AHLAGGNGSP SSGSDAGGGN YCQVGGAGTA
101: VGAAEEERRR RRMVSNRESA RRSRMRKQRQ LSELWAQVTH LRGANRRLLD ELNRALRGCA DARRESAKLR DEKAKLNEKL EQLLQQSAPE KKAASSPASS
201: NHSSSSSEPC KNSTAAAASI E
101: VGAAEEERRR RRMVSNRESA RRSRMRKQRQ LSELWAQVTH LRGANRRLLD ELNRALRGCA DARRESAKLR DEKAKLNEKL EQLLQQSAPE KKAASSPASS
201: NHSSSSSEPC KNSTAAAASI E
001: MNTIPAELTG YFHYLPPDKY NNQTPIMESE YFNMPSSPTS CSSFYHLNGL INNNNYSSSS NGQDLMTSNN STSDEDHQQS MVIDERKQRR MISNRESARR
101: SRMRKQRHLD ELWSQVIRLR TDNHCLMDKL NRVSESHELA LKENAKLKEE TSDLRQLISE IKSHNEDDNS FLRELEDSIS NSRSDSNQSG RDFELC
101: SRMRKQRHLD ELWSQVIRLR TDNHCLMDKL NRVSESHELA LKENAKLKEE TSDLRQLISE IKSHNEDDNS FLRELEDSIS NSRSDSNQSG RDFELC
Arabidopsis Description
AtbZIP58BZIP58 [Source:UniProtKB/TrEMBL;Acc:A0A178WP44]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.