Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Bra000214.1-P | |
| Bra002368.1-P | |
| Bra006595.1-P | |
| Bra018296.1-P | |
| Bra033467.1-P | |
| Bra039723.1-P |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX69495 | Canola | nucleus | 98.91 | 98.91 |
| CDY26467 | Canola | nucleus | 93.44 | 93.44 |
| AT5G15830.1 | Thale cress | nucleus | 65.03 | 63.98 |
| Bra023540.1-P | Field mustard | nucleus | 62.84 | 61.17 |
| Bra006324.1-P | Field mustard | nucleus | 51.91 | 52.49 |
| Bra026523.1-P | Field mustard | nucleus | 24.59 | 50.56 |
| Bra020735.1-P | Field mustard | nucleus | 43.17 | 46.2 |
| Bra025418.1-P | Field mustard | nucleus | 41.53 | 44.19 |
| PGSC0003DMT400003516 | Potato | nucleus | 42.08 | 42.78 |
| Solyc02g089420.1.1 | Tomato | nucleus | 42.08 | 42.78 |
| Solyc03g046440.1.1 | Tomato | nucleus | 37.16 | 39.31 |
| KRH01443 | Soybean | nucleus | 39.89 | 37.44 |
| KRH45160 | Soybean | nucleus | 39.34 | 37.31 |
| Bra038341.1-P | Field mustard | nucleus | 24.04 | 36.67 |
| Bra017359.1-P | Field mustard | nucleus | 34.43 | 36.21 |
| VIT_14s0083g00700.t01 | Wine grape | nucleus | 38.8 | 35.86 |
| Bra029353.1-P | Field mustard | mitochondrion, nucleus | 19.67 | 34.62 |
| KRG93749 | Soybean | nucleus | 41.53 | 34.55 |
| Bra019715.1-P | Field mustard | nucleus | 36.07 | 34.2 |
| Bra025144.1-P | Field mustard | nucleus | 31.69 | 34.12 |
| KRH18312 | Soybean | nucleus | 39.89 | 34.11 |
| Bra026895.1-P | Field mustard | nucleus | 35.52 | 33.33 |
| Bra026896.1-P | Field mustard | nucleus | 35.52 | 33.33 |
| GSMUA_Achr8P23510_001 | Banana | nucleus | 28.96 | 32.92 |
| Zm00001d052807_P001 | Maize | nucleus | 25.14 | 32.62 |
| GSMUA_Achr9P14690_001 | Banana | nucleus | 26.78 | 31.41 |
| Zm00001d017911_P001 | Maize | nucleus | 30.05 | 31.25 |
| EES07324 | Sorghum | nucleus | 28.42 | 30.77 |
| Os02t0728001-00 | Rice | nucleus | 27.32 | 29.59 |
| GSMUA_Achr6P36230_001 | Banana | nucleus | 27.87 | 29.14 |
| Zm00001d005962_P001 | Maize | nucleus, plastid | 25.14 | 28.05 |
| Zm00001d051739_P001 | Maize | nucleus | 22.95 | 28.0 |
| Os09t0474000-01 | Rice | nucleus | 26.23 | 27.75 |
| GSMUA_Achr5P05350_001 | Banana | nucleus | 24.59 | 27.44 |
| TraesCS7B01G293700.1 | Wheat | nucleus | 24.59 | 26.95 |
| TraesCS7B01G293900.1 | Wheat | nucleus | 24.59 | 26.95 |
| Zm00001d015664_P001 | Maize | nucleus | 24.59 | 26.79 |
| Bra013005.1-P | Field mustard | nucleus | 26.23 | 26.37 |
| Bra005971.1-P | Field mustard | nucleus | 22.95 | 26.25 |
| Bra035957.1-P | Field mustard | nucleus | 26.23 | 26.09 |
| TraesCS6D01G160200.1 | Wheat | nucleus | 24.59 | 25.57 |
| TraesCS7D01G213200.1 | Wheat | nucleus | 25.68 | 25.54 |
| TraesCS7B01G118500.1 | Wheat | nucleus | 25.68 | 25.54 |
| EES06428 | Sorghum | nucleus | 24.59 | 25.42 |
| TraesCS6A01G170600.1 | Wheat | nucleus | 24.59 | 25.42 |
| TraesCS5B01G248400.1 | Wheat | nucleus | 26.78 | 25.39 |
| HORVU7Hr1G043080.1 | Barley | nucleus | 26.78 | 25.26 |
| TraesCS6D01G270000.1 | Wheat | nucleus | 27.32 | 25.13 |
| TraesCS6B01G318700.1 | Wheat | nucleus | 28.42 | 25.12 |
| HORVU5Hr1G070540.1 | Barley | nucleus | 26.23 | 25.0 |
| TraesCS7A01G211500.1 | Wheat | nucleus | 25.14 | 24.86 |
| EER96905 | Sorghum | nucleus | 25.14 | 24.73 |
| Os02t0191600-00 | Rice | nucleus | 26.78 | 24.62 |
| HORVU6Hr1G072490.1 | Barley | nucleus | 26.23 | 24.49 |
| TraesCS6A01G288900.1 | Wheat | nucleus | 26.78 | 23.79 |
| TraesCS5A01G250400.1 | Wheat | nucleus | 25.14 | 23.47 |
| HORVU7Hr1G037230.2 | Barley | nucleus | 28.42 | 23.42 |
| TraesCS7B01G086100.1 | Wheat | nucleus | 28.42 | 23.32 |
| TraesCS5D01G258000.1 | Wheat | nucleus | 24.59 | 23.32 |
| TraesCS6B01G198700.1 | Wheat | nucleus | 22.4 | 23.16 |
| HORVU2Hr1G098530.1 | Barley | nucleus | 22.4 | 23.16 |
| TraesCS7D01G182900.1 | Wheat | nucleus | 27.87 | 23.08 |
| TraesCS7A01G181100.1 | Wheat | nucleus | 26.78 | 22.58 |
| HORVU1Hr1G013620.1 | Barley | nucleus | 22.4 | 22.53 |
| Zm00001d053703_P001 | Maize | nucleus | 21.31 | 22.16 |
| KXG25724 | Sorghum | nucleus | 27.87 | 22.08 |
| Zm00001d020823_P001 | Maize | nucleus | 23.5 | 22.05 |
| Zm00001d046664_P001 | Maize | nucleus | 21.86 | 21.39 |
| Zm00001d031272_P001 | Maize | nucleus | 23.5 | 21.29 |
| HORVU6Hr1G034810.1 | Barley | nucleus | 24.59 | 21.03 |
| KXG19789 | Sorghum | nucleus | 21.31 | 20.74 |
| Os08t0487100-01 | Rice | nucleus | 25.68 | 20.43 |
| Zm00001d037360_P001 | Maize | nucleus | 21.31 | 19.7 |
| KXG20422 | Sorghum | nucleus | 20.77 | 19.19 |
| TraesCS7A01G391800.1 | Wheat | mitochondrion | 20.77 | 15.7 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | EnsemblPlantsGene:Bra008670 | EnsemblPlants:Bra008670.1 | EnsemblPlants:Bra008670.1-P | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR004827 | UniProt:M4CWS3 | PFAM:PF00170 | ScanProsite:PS00036 |
| PFscan:PS50217 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF349 | SMART:SM00338 | SUPFAM:SSF57959 | UniParc:UPI0002544C3C |
| InterPro:bZIP | SEG:seg | : | : | : | : |
Description
AT5G15830 (E=8e-055) AtbZIP3 | AtbZIP3 (Arabidopsis thaliana basic leucine-zipper 3); DNA binding / transcription factor
Coordinates
chrA10:-:13316799..13317350
Molecular Weight (calculated)
21120.5 Da
IEP (calculated)
9.328
GRAVY (calculated)
-1.027
Length
183 amino acids
Sequence
(BLAST)
(BLAST)
001: MQPHYDSSSL NNMQQQDYFH LNHYYNNLNP SNNNLNLIPY PQFQELKLQS PASNNSTTSD EATENIFVIN ERKQRRMVSN RESARRSRMR KQRHLDELLS
101: QVAWLRSENH QLLEKLNQAS NSNDLVLQEN LSLKEKNLAL HQVITSMKKV KGAGESRSIS GRYSSSSLDQ DFSSITDGTH QPS
101: QVAWLRSENH QLLEKLNQAS NSNDLVLQEN LSLKEKNLAL HQVITSMKKV KGAGESRSIS GRYSSSSLDQ DFSSITDGTH QPS
001: MQPNYDSSSL NNMQQQDYFN LNNYYNNLNP STNNNNLNIL QYPQIQELNL QSPVSNNSTT SDDATEEIFV INERKQRRMV SNRESARRSR MRKQRHLDEL
101: LSQVAWLRSE NHQLLDKLNQ VSDNNDLVIQ ENSSLKEENL ELRQVITSMK KLGGGIHDKY SSPSSMDELD QDFSSITDDP RTHHPS
101: LSQVAWLRSE NHQLLDKLNQ VSDNNDLVIQ ENSSLKEENL ELRQVITSMK KLGGGIHDKY SSPSSMDELD QDFSSITDDP RTHHPS
Arabidopsis Description
AtbZIP3At5g15830 [Source:UniProtKB/TrEMBL;Acc:Q9LFU3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.