Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G15830.1 | CDX73678 | AT3G51920.1 | 17360592 |
| AT5G15830.1 | CDX95314 | AT3G51920.1 | 17360592 |
| AT5G15830.1 | CDY23174 | AT3G51920.1 | 17360592 |
| AT5G15830.1 | CDY06478 | AT4G14640.1 | 17360592 |
| AT5G15830.1 | CDX92401 | AT5G21274.1 | 17360592 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX69495 | Canola | nucleus | 94.54 | 94.54 |
| Bra008670.1-P | Field mustard | nucleus | 93.44 | 93.44 |
| AT5G15830.1 | Thale cress | nucleus | 65.57 | 64.52 |
| CDX85530 | Canola | nucleus | 65.03 | 63.3 |
| CDX70656 | Canola | nucleus | 63.93 | 61.58 |
| CDX90970 | Canola | nucleus | 64.48 | 60.82 |
| CDX70639 | Canola | nucleus | 62.3 | 59.38 |
| CDX78655 | Canola | nucleus | 61.75 | 58.55 |
| CDY35775 | Canola | nucleus | 44.26 | 47.37 |
| CDY66911 | Canola | nucleus | 42.62 | 45.35 |
| Solyc02g089420.1.1 | Tomato | nucleus | 42.62 | 43.33 |
| PGSC0003DMT400003516 | Potato | nucleus | 42.62 | 43.33 |
| CDX85297 | Canola | nucleus | 40.44 | 43.02 |
| CDX70638 | Canola | nucleus | 37.16 | 41.98 |
| Solyc03g046440.1.1 | Tomato | nucleus | 38.25 | 40.46 |
| KRH01443 | Soybean | nucleus | 39.34 | 36.92 |
| KRH45160 | Soybean | nucleus | 38.8 | 36.79 |
| CDY45843 | Canola | nucleus | 24.04 | 36.67 |
| CDY71548 | Canola | nucleus | 33.88 | 36.47 |
| CDY48072 | Canola | nucleus | 33.33 | 35.88 |
| CDY33124 | Canola | nucleus | 34.43 | 35.8 |
| CDY04169 | Canola | nucleus | 34.43 | 35.8 |
| VIT_14s0083g00700.t01 | Wine grape | nucleus | 38.25 | 35.35 |
| CDY46496 | Canola | nucleus | 34.43 | 35.2 |
| CDY16099 | Canola | nucleus | 31.15 | 34.97 |
| CDX99780 | Canola | nucleus | 33.88 | 34.64 |
| CDX81569 | Canola | nucleus | 22.4 | 34.17 |
| KRG93749 | Soybean | nucleus | 40.98 | 34.09 |
| KRH18312 | Soybean | nucleus | 39.34 | 33.64 |
| Zm00001d052807_P001 | Maize | nucleus | 25.68 | 33.33 |
| Zm00001d017911_P001 | Maize | nucleus | 31.15 | 32.39 |
| CDY45336 | Canola | nucleus | 34.97 | 32.32 |
| CDX98108 | Canola | nucleus | 34.97 | 32.32 |
| CDY37559 | Canola | nucleus | 34.97 | 32.32 |
| GSMUA_Achr8P23510_001 | Banana | nucleus | 28.42 | 32.3 |
| CDX70640 | Canola | nucleus | 27.32 | 31.45 |
| GSMUA_Achr9P14690_001 | Banana | nucleus | 26.78 | 31.41 |
| EES07324 | Sorghum | nucleus | 28.96 | 31.36 |
| GSMUA_Achr6P36230_001 | Banana | nucleus | 28.96 | 30.29 |
| Os02t0728001-00 | Rice | nucleus | 27.32 | 29.59 |
| CDY40812 | Canola | nucleus | 27.87 | 28.81 |
| Zm00001d005962_P001 | Maize | nucleus, plastid | 25.68 | 28.66 |
| GSMUA_Achr5P05350_001 | Banana | nucleus | 25.14 | 28.05 |
| Zm00001d051739_P001 | Maize | nucleus | 22.95 | 28.0 |
| Zm00001d015664_P001 | Maize | nucleus | 25.68 | 27.98 |
| CDY42835 | Canola | nucleus | 26.78 | 27.68 |
| TraesCS7B01G293700.1 | Wheat | nucleus | 25.14 | 27.54 |
| TraesCS7B01G293900.1 | Wheat | nucleus | 25.14 | 27.54 |
| CDX78324 | Canola | nucleus | 25.14 | 27.06 |
| CDY66792 | Canola | nucleus | 24.04 | 26.83 |
| TraesCS6D01G160200.1 | Wheat | nucleus | 25.68 | 26.7 |
| Os09t0474000-01 | Rice | nucleus | 25.14 | 26.59 |
| TraesCS6A01G170600.1 | Wheat | nucleus | 25.14 | 25.99 |
| CDY51629 | Canola | nucleus | 26.78 | 25.93 |
| HORVU7Hr1G043080.1 | Barley | nucleus | 27.32 | 25.77 |
| TraesCS6D01G270000.1 | Wheat | nucleus | 27.87 | 25.63 |
| Os02t0191600-00 | Rice | nucleus | 27.87 | 25.63 |
| TraesCS7B01G118500.1 | Wheat | nucleus | 25.68 | 25.54 |
| TraesCS7D01G213200.1 | Wheat | nucleus | 25.68 | 25.54 |
| HORVU6Hr1G072490.1 | Barley | nucleus | 27.32 | 25.51 |
| EES06428 | Sorghum | nucleus | 24.59 | 25.42 |
| TraesCS6B01G318700.1 | Wheat | nucleus | 28.42 | 25.12 |
| TraesCS5B01G248400.1 | Wheat | nucleus | 26.23 | 24.87 |
| TraesCS7A01G211500.1 | Wheat | nucleus | 25.14 | 24.86 |
| CDY02193 | Canola | nucleus | 24.04 | 24.04 |
| TraesCS6A01G288900.1 | Wheat | nucleus | 26.78 | 23.79 |
| TraesCS6B01G198700.1 | Wheat | nucleus | 22.95 | 23.73 |
| EER96905 | Sorghum | nucleus | 24.04 | 23.66 |
| HORVU5Hr1G070540.1 | Barley | nucleus | 24.59 | 23.44 |
| HORVU2Hr1G098530.1 | Barley | nucleus | 22.4 | 23.16 |
| Zm00001d020823_P001 | Maize | nucleus | 24.59 | 23.08 |
| TraesCS5D01G258000.1 | Wheat | nucleus | 24.04 | 22.8 |
| Zm00001d053703_P001 | Maize | nucleus | 21.86 | 22.73 |
| HORVU7Hr1G037230.2 | Barley | nucleus | 27.32 | 22.52 |
| KXG25724 | Sorghum | nucleus | 28.42 | 22.51 |
| TraesCS5A01G250400.1 | Wheat | nucleus | 24.04 | 22.45 |
| HORVU1Hr1G013620.1 | Barley | nucleus | 21.86 | 21.98 |
| TraesCS7B01G086100.1 | Wheat | nucleus | 26.78 | 21.97 |
| Zm00001d031272_P001 | Maize | nucleus | 24.04 | 21.78 |
| CDX87188 | Canola | nucleus | 25.68 | 21.56 |
| HORVU6Hr1G034810.1 | Barley | nucleus | 25.14 | 21.5 |
| Zm00001d046664_P001 | Maize | nucleus | 21.86 | 21.39 |
| KXG19789 | Sorghum | nucleus | 21.86 | 21.28 |
| TraesCS7D01G182900.1 | Wheat | nucleus | 25.68 | 21.27 |
| TraesCS7A01G181100.1 | Wheat | nucleus | 25.14 | 21.2 |
| Os08t0487100-01 | Rice | nucleus | 25.14 | 20.0 |
| KXG20422 | Sorghum | nucleus | 20.77 | 19.19 |
| Zm00001d037360_P001 | Maize | nucleus | 20.77 | 19.19 |
| CDY16837 | Canola | nucleus | 21.86 | 18.1 |
| TraesCS7A01G391800.1 | Wheat | mitochondrion | 21.31 | 16.12 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | GO:A0A078GMN7 | UniProt:A0A078GMN7 | EnsemblPlants:CDY26467 | ProteinID:CDY26467 |
| ProteinID:CDY26467.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00035270001 | InterPro:IPR004827 |
| PFAM:PF00170 | ScanProsite:PS00036 | PFscan:PS50217 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF349 | SMART:SM00338 |
| SUPFAM:SSF57959 | UniParc:UPI0004EE8FD1 | InterPro:bZIP | SEG:seg | : | : |
Description
BnaC09g42010DBnaC09g42010D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GMN7]
Coordinates
chrLK032190:+:317380..317931
Molecular Weight (calculated)
21016.3 Da
IEP (calculated)
7.920
GRAVY (calculated)
-0.995
Length
183 amino acids
Sequence
(BLAST)
(BLAST)
001: MQPNYDSSSL NNMQQQDYFH LNHYYNNLNP SNNNLNIFPY PQFQELNLQS PASNNSTTSD EATEDIFVIN ERKQRRMVSN RESARRSRMR KQRHLDELLS
101: QVAWLRSENQ QLLEKLNQAS NSNDLVLQEN SSLKEKNLAL HQVITSMKKV IGAGGSRSIN GRYSSASLDH DFSSITDGTH QPS
101: QVAWLRSENQ QLLEKLNQAS NSNDLVLQEN SSLKEKNLAL HQVITSMKKV IGAGGSRSIN GRYSSASLDH DFSSITDGTH QPS
001: MQPNYDSSSL NNMQQQDYFN LNNYYNNLNP STNNNNLNIL QYPQIQELNL QSPVSNNSTT SDDATEEIFV INERKQRRMV SNRESARRSR MRKQRHLDEL
101: LSQVAWLRSE NHQLLDKLNQ VSDNNDLVIQ ENSSLKEENL ELRQVITSMK KLGGGIHDKY SSPSSMDELD QDFSSITDDP RTHHPS
101: LSQVAWLRSE NHQLLDKLNQ VSDNNDLVIQ ENSSLKEENL ELRQVITSMK KLGGGIHDKY SSPSSMDELD QDFSSITDDP RTHHPS
Arabidopsis Description
AtbZIP3At5g15830 [Source:UniProtKB/TrEMBL;Acc:Q9LFU3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.