Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY42835 | Canola | nucleus | 90.96 | 90.96 |
| Bra029353.1-P | Field mustard | mitochondrion, nucleus | 53.11 | 90.38 |
| CDX87188 | Canola | nucleus | 75.14 | 61.01 |
| CDY51629 | Canola | nucleus | 63.84 | 59.79 |
| CDY02193 | Canola | nucleus | 48.59 | 46.99 |
| AT5G60830.1 | Thale cress | nucleus | 54.24 | 46.6 |
| CDY16837 | Canola | nucleus | 56.5 | 45.25 |
| CDY66792 | Canola | nucleus | 33.33 | 35.98 |
| CDX78324 | Canola | nucleus | 31.64 | 32.94 |
| KRH03190 | Soybean | cytosol, mitochondrion | 19.21 | 32.69 |
| CDY66911 | Canola | nucleus | 31.64 | 32.56 |
| KRH63157 | Soybean | nucleus | 28.81 | 30.54 |
| CDX85297 | Canola | nucleus | 29.38 | 30.23 |
| CDY35775 | Canola | nucleus | 28.25 | 29.24 |
| CDX69495 | Canola | nucleus | 29.38 | 28.42 |
| CDY26467 | Canola | nucleus | 28.81 | 27.87 |
| KRH56749 | Soybean | nucleus | 32.77 | 27.1 |
| CDY16099 | Canola | nucleus | 24.86 | 26.99 |
| CDY71548 | Canola | nucleus | 24.86 | 25.88 |
| CDY48072 | Canola | nucleus | 24.86 | 25.88 |
| CDY45843 | Canola | nucleus | 17.51 | 25.83 |
| CDX70656 | Canola | nucleus | 27.68 | 25.79 |
| CDY04169 | Canola | nucleus | 24.29 | 24.43 |
| CDY33124 | Canola | nucleus | 24.29 | 24.43 |
| CDX78655 | Canola | nucleus | 26.55 | 24.35 |
| CDX85530 | Canola | nucleus | 25.42 | 23.94 |
| Zm00001d017911_P001 | Maize | nucleus | 23.73 | 23.86 |
| CDX70639 | Canola | nucleus | 25.42 | 23.44 |
| GSMUA_Achr6P36230_001 | Banana | nucleus | 23.16 | 23.43 |
| Zm00001d052807_P001 | Maize | nucleus | 18.64 | 23.4 |
| Os02t0728001-00 | Rice | nucleus | 22.03 | 23.08 |
| GSMUA_Achr9P14690_001 | Banana | nucleus | 20.34 | 23.08 |
| EES07324 | Sorghum | nucleus | 22.03 | 23.08 |
| CDX90970 | Canola | nucleus | 24.86 | 22.68 |
| Zm00001d051739_P001 | Maize | nucleus | 19.21 | 22.67 |
| GSMUA_Achr5P05350_001 | Banana | nucleus | 20.9 | 22.56 |
| GSMUA_Achr8P23510_001 | Banana | nucleus | 20.34 | 22.36 |
| CDY46496 | Canola | nucleus | 22.6 | 22.35 |
| CDX99780 | Canola | nucleus | 22.6 | 22.35 |
| CDX81569 | Canola | nucleus | 14.69 | 21.67 |
| TraesCS5A01G250400.1 | Wheat | nucleus | 23.73 | 21.43 |
| CDY37559 | Canola | nucleus | 23.73 | 21.21 |
| CDX98108 | Canola | nucleus | 23.73 | 21.21 |
| CDY45336 | Canola | nucleus | 23.73 | 21.21 |
| Zm00001d015664_P001 | Maize | nucleus | 19.77 | 20.83 |
| HORVU5Hr1G070540.1 | Barley | nucleus | 22.6 | 20.83 |
| HORVU7Hr1G043080.1 | Barley | nucleus | 22.6 | 20.62 |
| TraesCS7B01G293700.1 | Wheat | nucleus | 19.21 | 20.36 |
| TraesCS7A01G181100.1 | Wheat | nucleus | 24.86 | 20.28 |
| Os09t0474000-01 | Rice | nucleus | 19.77 | 20.23 |
| TraesCS5B01G248400.1 | Wheat | nucleus | 22.03 | 20.21 |
| Zm00001d005962_P001 | Maize | nucleus, plastid | 18.64 | 20.12 |
| Os02t0191600-00 | Rice | nucleus | 22.6 | 20.1 |
| TraesCS6B01G318700.1 | Wheat | nucleus | 23.16 | 19.81 |
| TraesCS7A01G211500.1 | Wheat | nucleus | 20.34 | 19.46 |
| EER96905 | Sorghum | nucleus | 20.34 | 19.35 |
| KXG19789 | Sorghum | nucleus | 20.34 | 19.15 |
| TraesCS7B01G118500.1 | Wheat | nucleus | 19.77 | 19.02 |
| TraesCS7D01G213200.1 | Wheat | nucleus | 19.77 | 19.02 |
| TraesCS7D01G182900.1 | Wheat | nucleus | 23.73 | 19.0 |
| EES06428 | Sorghum | nucleus | 18.64 | 18.64 |
| TraesCS6A01G288900.1 | Wheat | nucleus | 21.47 | 18.45 |
| Os08t0487100-01 | Rice | nucleus | 23.73 | 18.26 |
| TraesCS5D01G258000.1 | Wheat | nucleus | 19.77 | 18.13 |
| HORVU1Hr1G013620.1 | Barley | nucleus | 18.64 | 18.13 |
| TraesCS6D01G270000.1 | Wheat | nucleus | 20.34 | 18.09 |
| TraesCS6B01G198700.1 | Wheat | nucleus | 18.08 | 18.08 |
| HORVU2Hr1G098530.1 | Barley | nucleus | 18.08 | 18.08 |
| HORVU7Hr1G037230.2 | Barley | nucleus | 22.6 | 18.02 |
| TraesCS7B01G293900.1 | Wheat | nucleus | 16.95 | 17.96 |
| TraesCS6A01G170600.1 | Wheat | nucleus | 17.51 | 17.51 |
| HORVU6Hr1G072490.1 | Barley | nucleus | 19.21 | 17.35 |
| Zm00001d031272_P001 | Maize | nucleus | 19.77 | 17.33 |
| TraesCS6D01G160200.1 | Wheat | nucleus | 16.95 | 17.05 |
| TraesCS7B01G086100.1 | Wheat | nucleus | 21.47 | 17.04 |
| KXG25724 | Sorghum | nucleus | 22.03 | 16.88 |
| Zm00001d037360_P001 | Maize | nucleus | 18.64 | 16.67 |
| CDX70638 | Canola | nucleus | 15.25 | 16.67 |
| Zm00001d053703_P001 | Maize | nucleus | 16.38 | 16.48 |
| Zm00001d020823_P001 | Maize | nucleus | 17.51 | 15.9 |
| Zm00001d046664_P001 | Maize | nucleus | 16.38 | 15.51 |
| KXG20422 | Sorghum | nucleus | 15.82 | 14.14 |
| HORVU6Hr1G034810.1 | Barley | nucleus | 16.95 | 14.02 |
| CDX70640 | Canola | nucleus | 12.43 | 13.84 |
| TraesCS7A01G391800.1 | Wheat | mitochondrion | 17.51 | 12.81 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | GO:A0A078HSJ3 | UniProt:A0A078HSJ3 | EnsemblPlants:CDY40812 | ProteinID:CDY40812 |
| ProteinID:CDY40812.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00071735001 | InterPro:IPR004827 | PFAM:PF00170 | ScanProsite:PS00036 | PFscan:PS50217 |
| PANTHER:PTHR22952 | PANTHER:PTHR22952:SF214 | SMART:SM00338 | SUPFAM:SSF57959 | UniParc:UPI0004EF09F3 | InterPro:bZIP |
| SEG:seg | : | : | : | : | : |
Description
BnaC02g41810DBnaC02g41810D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HSJ3]
Coordinates
chrLK032479:+:224056..224589
Molecular Weight (calculated)
20583.4 Da
IEP (calculated)
10.341
GRAVY (calculated)
-0.828
Length
177 amino acids
Sequence
(BLAST)
(BLAST)
001: MESSVHRSHH CFDILEGMSP QGDHFNSAFL PNANFHVSLQ SLPPNSSTHN NNNRSHLNPT IYHNEGLERR ARRMVSNRES ARRSRMRTKK QIQELQQQVE
101: QLMILNHNLS EKVIHLLESN HQILQENSQL KEKVSSFQLL MAEMQIPMRN VDGSINDRVV NHLRGETLNR TNAFFGR
101: QLMILNHNLS EKVIHLLESN HQILQENSQL KEKVSSFQLL MAEMQIPMRN VDGSINDRVV NHLRGETLNR TNAFFGR
001: MESSSVHRSH CFDILDGVPL HDDHFNSAFL PNTDFNVHLQ SNVSTRINNQ SHLDPNAENI FHNEGLAPEE RRARRMVSNR ESARRSRMRK KKQIEELQQQ
101: VEQLMMLNHH LSEKVINLLE SNHQILQENS QLKEKVSSFH LLMADVLLPM RNAESNINDR NVNYLRGEPS NRPTNSPFAS STMIDAMYAT SDYYSSNYLL
201: AFVCRY
101: VEQLMMLNHH LSEKVINLLE SNHQILQENS QLKEKVSSFH LLMADVLLPM RNAESNINDR NVNYLRGEPS NRPTNSPFAS STMIDAMYAT SDYYSSNYLL
201: AFVCRY
Arabidopsis Description
AtbZIP70BZIP70 [Source:UniProtKB/TrEMBL;Acc:A0A178UEP1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.