Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G15830.1 | CDX73678 | AT3G51920.1 | 17360592 |
| AT5G15830.1 | CDX95314 | AT3G51920.1 | 17360592 |
| AT5G15830.1 | CDY23174 | AT3G51920.1 | 17360592 |
| AT5G15830.1 | CDY06478 | AT4G14640.1 | 17360592 |
| AT5G15830.1 | CDX92401 | AT5G21274.1 | 17360592 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra023540.1-P | Field mustard | nucleus | 94.33 | 97.34 |
| CDX85530 | Canola | nucleus | 94.33 | 97.34 |
| AT5G15830.1 | Thale cress | nucleus | 77.32 | 80.65 |
| CDX70656 | Canola | nucleus | 77.84 | 79.47 |
| CDX70639 | Canola | nucleus | 75.77 | 76.56 |
| CDX78655 | Canola | nucleus | 75.77 | 76.17 |
| CDY26467 | Canola | nucleus | 60.82 | 64.48 |
| CDX69495 | Canola | nucleus | 59.79 | 63.39 |
| CDX70638 | Canola | nucleus | 51.03 | 61.11 |
| CDX70640 | Canola | nucleus | 42.27 | 51.57 |
| CDX85297 | Canola | nucleus | 41.75 | 47.09 |
| CDY35775 | Canola | nucleus | 40.21 | 45.61 |
| CDY66911 | Canola | nucleus | 39.18 | 44.19 |
| Solyc02g089420.1.1 | Tomato | nucleus | 40.21 | 43.33 |
| PGSC0003DMT400003516 | Potato | nucleus | 40.21 | 43.33 |
| KRH45160 | Soybean | nucleus | 39.18 | 39.38 |
| Solyc03g046440.1.1 | Tomato | nucleus | 35.05 | 39.31 |
| CDY45843 | Canola | nucleus | 24.23 | 39.17 |
| KRH01443 | Soybean | nucleus | 39.18 | 38.97 |
| KRG93749 | Soybean | nucleus | 43.3 | 38.18 |
| VIT_14s0083g00700.t01 | Wine grape | nucleus | 38.14 | 37.37 |
| CDX99780 | Canola | nucleus | 34.02 | 36.87 |
| CDY16099 | Canola | nucleus | 30.93 | 36.81 |
| KRH18312 | Soybean | nucleus | 40.21 | 36.45 |
| CDY46496 | Canola | nucleus | 33.51 | 36.31 |
| CDY71548 | Canola | nucleus | 31.44 | 35.88 |
| CDX81569 | Canola | nucleus | 22.16 | 35.83 |
| CDY33124 | Canola | nucleus | 32.47 | 35.8 |
| CDY04169 | Canola | nucleus | 32.47 | 35.8 |
| CDY48072 | Canola | nucleus | 30.93 | 35.29 |
| Zm00001d052807_P001 | Maize | nucleus | 24.74 | 34.04 |
| CDY37559 | Canola | nucleus | 34.54 | 33.84 |
| CDY45336 | Canola | nucleus | 34.54 | 33.84 |
| CDX98108 | Canola | nucleus | 34.54 | 33.84 |
| GSMUA_Achr8P23510_001 | Banana | nucleus | 27.84 | 33.54 |
| GSMUA_Achr9P14690_001 | Banana | nucleus | 26.8 | 33.33 |
| EES07324 | Sorghum | nucleus | 27.84 | 31.95 |
| Zm00001d017911_P001 | Maize | nucleus | 28.87 | 31.82 |
| GSMUA_Achr5P05350_001 | Banana | nucleus | 26.29 | 31.1 |
| GSMUA_Achr6P36230_001 | Banana | nucleus | 27.84 | 30.86 |
| Os02t0728001-00 | Rice | nucleus | 26.8 | 30.77 |
| TraesCS7B01G293900.1 | Wheat | nucleus | 26.29 | 30.54 |
| TraesCS7D01G213200.1 | Wheat | nucleus | 28.35 | 29.89 |
| TraesCS7B01G118500.1 | Wheat | nucleus | 27.32 | 28.8 |
| TraesCS7B01G293700.1 | Wheat | nucleus | 24.74 | 28.74 |
| Zm00001d051739_P001 | Maize | nucleus | 22.16 | 28.67 |
| Zm00001d015664_P001 | Maize | nucleus | 24.74 | 28.57 |
| TraesCS6D01G160200.1 | Wheat | nucleus | 25.77 | 28.41 |
| Os09t0474000-01 | Rice | nucleus | 25.26 | 28.32 |
| TraesCS7A01G211500.1 | Wheat | nucleus | 26.8 | 28.11 |
| TraesCS6B01G198700.1 | Wheat | nucleus | 25.26 | 27.68 |
| TraesCS6D01G270000.1 | Wheat | nucleus | 27.84 | 27.14 |
| TraesCS6A01G170600.1 | Wheat | nucleus | 24.74 | 27.12 |
| EES06428 | Sorghum | nucleus | 24.74 | 27.12 |
| Zm00001d005962_P001 | Maize | nucleus, plastid | 22.68 | 26.83 |
| HORVU7Hr1G043080.1 | Barley | nucleus | 26.8 | 26.8 |
| Os02t0191600-00 | Rice | nucleus | 26.8 | 26.13 |
| HORVU5Hr1G070540.1 | Barley | nucleus | 25.77 | 26.04 |
| TraesCS6B01G318700.1 | Wheat | nucleus | 27.32 | 25.6 |
| HORVU6Hr1G072490.1 | Barley | nucleus | 25.77 | 25.51 |
| TraesCS5B01G248400.1 | Wheat | nucleus | 25.26 | 25.39 |
| EER96905 | Sorghum | nucleus | 24.23 | 25.27 |
| Zm00001d053703_P001 | Maize | nucleus | 22.68 | 25.0 |
| TraesCS5D01G258000.1 | Wheat | nucleus | 24.74 | 24.87 |
| CDY40812 | Canola | nucleus | 22.68 | 24.86 |
| CDY42835 | Canola | nucleus | 22.68 | 24.86 |
| TraesCS5A01G250400.1 | Wheat | nucleus | 24.74 | 24.49 |
| CDY51629 | Canola | nucleus | 23.2 | 23.81 |
| CDY66792 | Canola | nucleus | 20.1 | 23.78 |
| HORVU6Hr1G034810.1 | Barley | nucleus | 25.77 | 23.36 |
| TraesCS6A01G288900.1 | Wheat | nucleus | 24.74 | 23.3 |
| HORVU2Hr1G098530.1 | Barley | nucleus | 21.13 | 23.16 |
| HORVU1Hr1G013620.1 | Barley | nucleus | 21.65 | 23.08 |
| TraesCS7D01G182900.1 | Wheat | nucleus | 26.29 | 23.08 |
| KXG25724 | Sorghum | nucleus | 27.32 | 22.94 |
| KXG19789 | Sorghum | nucleus | 22.16 | 22.87 |
| Os08t0487100-01 | Rice | nucleus | 26.8 | 22.61 |
| Zm00001d020823_P001 | Maize | nucleus | 22.68 | 22.56 |
| HORVU7Hr1G037230.2 | Barley | nucleus | 25.77 | 22.52 |
| TraesCS7B01G086100.1 | Wheat | nucleus | 25.77 | 22.42 |
| Zm00001d031272_P001 | Maize | nucleus | 23.2 | 22.28 |
| CDY02193 | Canola | nucleus | 20.62 | 21.86 |
| Zm00001d037360_P001 | Maize | nucleus | 22.16 | 21.72 |
| TraesCS7A01G181100.1 | Wheat | nucleus | 24.23 | 21.66 |
| KXG20422 | Sorghum | nucleus | 21.13 | 20.71 |
| CDX78324 | Canola | nucleus | 18.04 | 20.59 |
| Zm00001d046664_P001 | Maize | nucleus | 19.07 | 19.79 |
| CDX87188 | Canola | nucleus | 21.65 | 19.27 |
| TraesCS7A01G391800.1 | Wheat | mitochondrion | 22.16 | 17.77 |
| CDY16837 | Canola | nucleus | 20.1 | 17.65 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | GO:A0A078DP03 | EnsemblPlants:CDX90970 | ProteinID:CDX90970 | ProteinID:CDX90970.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00151726001 | InterPro:IPR004827 | PFAM:PF00170 |
| ScanProsite:PS00036 | PFscan:PS50217 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF349 | SMART:SM00338 | SUPFAM:SSF57959 |
| UniParc:UPI0004EAE63E | InterPro:bZIP | SEG:seg | : | : | : |
Description
BnaC02g06270D
Coordinates
chrLK031865:-:36823..37407
Molecular Weight (calculated)
22697.2 Da
IEP (calculated)
6.396
GRAVY (calculated)
-1.062
Length
194 amino acids
Sequence
(BLAST)
(BLAST)
001: MQPNYDSSSF NNMQQQDYFH LNHYYNNLNP STNINNLNLI PYPQIHQEFN LQSPGNNSTT SDEATEDIFV INDRKQRRMV SNRESARRSR MRKQRHLDEL
101: LSQVAWLRSE NQQLLDKLNQ ASDSNDLVIQ ENLRLKEENV ELRQVITSMK KLGGSTSLQG RYCSSSLDHE LDQDFSCITD DPRTHHPSRV VRSD
101: LSQVAWLRSE NQQLLDKLNQ ASDSNDLVIQ ENLRLKEENV ELRQVITSMK KLGGSTSLQG RYCSSSLDHE LDQDFSCITD DPRTHHPSRV VRSD
001: MQPNYDSSSL NNMQQQDYFN LNNYYNNLNP STNNNNLNIL QYPQIQELNL QSPVSNNSTT SDDATEEIFV INERKQRRMV SNRESARRSR MRKQRHLDEL
101: LSQVAWLRSE NHQLLDKLNQ VSDNNDLVIQ ENSSLKEENL ELRQVITSMK KLGGGIHDKY SSPSSMDELD QDFSSITDDP RTHHPS
101: LSQVAWLRSE NHQLLDKLNQ VSDNNDLVIQ ENSSLKEENL ELRQVITSMK KLGGGIHDKY SSPSSMDELD QDFSSITDDP RTHHPS
Arabidopsis Description
AtbZIP3At5g15830 [Source:UniProtKB/TrEMBL;Acc:Q9LFU3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.