Factsheet for VIT_14s0083g00700.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 4

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_01s0010g00930.t01
VIT_05s0020g04420.t01
VIT_06s0009g01910.t01
VIT_08s0040g00470.t01
VIT_12s0028g02590.t01
VIT_14s0083g00700.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G30530.1	VIT_01s0010g00930.t01	AT1G13600.1	16709202
AT3G30530.1	VIT_06s0009g01910.t01	AT2G41090.1	17360592
AT3G30530.1	VIT_08s0040g00470.t01	AT2G41090.1	17360592
AT3G30530.1	VIT_14s0083g00700.t01	AT3G30530.1	16709202
AT5G15830.1	VIT_06s0009g01910.t01	AT2G41090.1	17360592
AT5G15830.1	VIT_08s0040g00470.t01	AT2G41090.1	17360592
AT5G15830.1	VIT_06s0009g01910.t01	AT2G41100.1	17360592
AT5G15830.1	VIT_08s0040g00470.t01	AT2G41100.1	17360592
AT5G15830.1	VIT_05s0020g04420.t01	AT4G14640.1	17360592
AT5G15830.1	VIT_06s0009g01910.t01	AT5G21274.1	17360592
AT5G15830.1	VIT_08s0040g00470.t01	AT5G21274.1	17360592
AT5G38800.1	VIT_06s0009g01910.t01	AT2G41090.1	17360592
AT5G38800.1	VIT_08s0040g00470.t01	AT2G41090.1	17360592
AT5G38800.1	VIT_06s0009g01910.t01	AT2G41100.1	17360592
AT5G38800.1	VIT_08s0040g00470.t01	AT2G41100.1	17360592
AT5G38800.1	VIT_12s0028g02590.t01	AT3G58120.1	17719007
AT5G38800.1	VIT_05s0020g04420.t01	AT4G14640.1	17360592
AT5G38800.1	VIT_06s0009g01910.t01	AT5G21274.1	17360592
AT5G38800.1	VIT_08s0040g00470.t01	AT5G21274.1	17360592
AT5G38800.1	VIT_14s0083g00700.t01	AT5G38800.1	17719007

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_01s0010g00930.t01	Wine grape	nucleus	63.64	64.62
KRH45160	Soybean	nucleus	58.08	59.59
KRH01443	Soybean	nucleus	58.08	58.97
PGSC0003DMT400003516	Potato	nucleus	52.53	57.78
Solyc02g089420.1.1	Tomato	nucleus	52.02	57.22
CDX85297	Canola	nucleus	47.47	54.65
KRG93749	Soybean	nucleus	57.58	51.82
Bra025418.1-P	Field mustard	nucleus	44.44	51.16
KRH18312	Soybean	nucleus	55.05	50.93
AT3G30530.1	Thale cress	nucleus	44.44	50.87
Solyc03g046440.1.1	Tomato	nucleus	43.94	50.29
CDY35775	Canola	nucleus	41.92	48.54
CDY66911	Canola	nucleus	41.92	48.26
Bra020735.1-P	Field mustard	nucleus	40.4	46.78
AT5G38800.1	Thale cress	nucleus	38.89	46.67
GSMUA_Achr8P23510_001	Banana	nucleus	36.36	44.72
Bra006324.1-P	Field mustard	nucleus	37.88	41.44
GSMUA_Achr9P14690_001	Banana	nucleus	32.32	41.03
EES07324	Sorghum	nucleus	34.85	40.83
AT5G15830.1	Thale cress	nucleus	37.37	39.78
Os02t0728001-00	Rice	nucleus	33.84	39.65
GSMUA_Achr6P36230_001	Banana	nucleus	34.85	39.43
CDX85530	Canola	nucleus	37.37	39.36
Bra023540.1-P	Field mustard	nucleus	37.37	39.36
CDX69495	Canola	nucleus	36.36	39.34
Bra008670.1-P	Field mustard	nucleus	35.86	38.8
CDY26467	Canola	nucleus	35.35	38.25
CDX90970	Canola	nucleus	37.37	38.14
CDX70656	Canola	nucleus	35.35	36.84
Zm00001d017911_P001	Maize	nucleus	32.32	36.36
CDX78655	Canola	nucleus	35.35	36.27
CDX70639	Canola	nucleus	34.85	35.94
GSMUA_Achr5P05350_001	Banana	nucleus	26.77	32.32
Zm00001d051739_P001	Maize	nucleus	24.24	32.0
HORVU2Hr1G098530.1	Barley	nucleus	28.28	31.64
TraesCS6B01G318700.1	Wheat	nucleus	32.32	30.92
Os09t0474000-01	Rice	nucleus	26.77	30.64
Zm00001d052807_P001	Maize	nucleus	21.72	30.5
TraesCS6D01G270000.1	Wheat	nucleus	29.8	29.65
HORVU6Hr1G072490.1	Barley	nucleus	29.29	29.59
Zm00001d005962_P001	Maize	nucleus, plastid	24.24	29.27
HORVU5Hr1G070540.1	Barley	nucleus	28.28	29.17
HORVU1Hr1G013620.1	Barley	nucleus	26.77	29.12
EER96905	Sorghum	nucleus	27.27	29.03
TraesCS6D01G160200.1	Wheat	nucleus	25.76	28.98
TraesCS7B01G118500.1	Wheat	nucleus	26.77	28.8
Os02t0191600-00	Rice	nucleus	28.79	28.64
TraesCS7D01G213200.1	Wheat	nucleus	26.26	28.26
EES06428	Sorghum	nucleus	25.25	28.25
TraesCS6A01G170600.1	Wheat	nucleus	25.25	28.25
TraesCS7B01G293700.1	Wheat	nucleus	23.74	28.14
TraesCS5B01G248400.1	Wheat	nucleus	27.27	27.98
Zm00001d015664_P001	Maize	nucleus	23.74	27.98
TraesCS7A01G211500.1	Wheat	nucleus	25.76	27.57
TraesCS5A01G250400.1	Wheat	nucleus	27.27	27.55
TraesCS7B01G293900.1	Wheat	nucleus	23.23	27.54
HORVU7Hr1G043080.1	Barley	nucleus	26.26	26.8
TraesCS6B01G198700.1	Wheat	nucleus	23.74	26.55
TraesCS5D01G258000.1	Wheat	nucleus	25.76	26.42
TraesCS6A01G288900.1	Wheat	nucleus	27.27	26.21
Zm00001d020823_P001	Maize	nucleus	25.76	26.15
CDX70638	Canola	nucleus	21.21	25.93
Zm00001d031272_P001	Maize	nucleus	26.26	25.74
CDX70640	Canola	nucleus	20.2	25.16
KXG19789	Sorghum	nucleus	23.74	25.0
TraesCS7D01G182900.1	Wheat	nucleus	27.78	24.89
Zm00001d037360_P001	Maize	nucleus	24.75	24.75
Zm00001d053703_P001	Maize	nucleus	21.72	24.43
TraesCS7A01G181100.1	Wheat	nucleus	26.77	24.42
HORVU7Hr1G037230.2	Barley	nucleus	27.27	24.32
Zm00001d046664_P001	Maize	nucleus	22.22	23.53
Os08t0487100-01	Rice	nucleus	27.27	23.48
TraesCS7B01G086100.1	Wheat	nucleus	25.76	22.87
KXG25724	Sorghum	nucleus	26.26	22.51
KXG20422	Sorghum	nucleus	22.22	22.22
HORVU6Hr1G034810.1	Barley	nucleus	23.74	21.96
TraesCS7A01G391800.1	Wheat	mitochondrion	21.72	17.77

Protein Annotations

Gene3D:1.20.5.170	EntrezGene:100265244	wikigene:100265244	MapMan:15.5.4.1	UniProt:A5ANJ4	EMBL:AM430838
ProteinID:CAN66938	ProteinID:CAN66938.1	ProteinID:CCB44071	ProteinID:CCB44071.1	ncoils:Coil	EMBL:FN594955
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR004827
EntrezGene:LOC100265244	wikigene:LOC100265244	PFAM:PF00170	ScanProsite:PS00036	PFscan:PS50217	PANTHER:PTHR22952
PANTHER:PTHR22952:SF365	SMART:SM00338	SUPFAM:SSF57959	UniParc:UPI000151EFEF	ArrayExpress:VIT_14s0083g00700	EnsemblPlantsGene:VIT_14s0083g00700
EnsemblPlants:VIT_14s0083g00700.t01	unigene:Vvi.23143	RefSeq:XP_002278738	RefSeq:XP_002278738.1	InterPro:bZIP	:

Description

No Description!

Coordinates

chr14:-:22839619..22840360

Molecular Weight (calculated)

22883.6 Da

IEP (calculated)

5.792

GRAVY (calculated)

-0.859

Length

198 amino acids

Sequence
(BLAST)

001: MQSSEVTGLH YFVPSNPTPY PAHFSMAGNN APSIHFSGFS SSPLSNFHVV SPQVHEFNPQ ISCFSSNSTS DEADEQQLSL INERKQRRMI SNRESARRSR
101: MRKQKHLDEL WSQVVWLRNE NHQLIDKLNH VSECHDRVLQ ENVQLKEEAS ELRQMVTDLQ LNSPYPNLRD LEDEPSETPY LRDESSNPSI TSSMEMIR

Best Arabidopsis Sequence Match ( AT3G30530.1 )
(BLAST)

001: MQPQTDVFSL HNYLNSSILQ SPYPSNFPIS TPFPTNGQNP YLLYGFQSPT NNPQSMSLSS NNSTSDEAEE QQTNNNIINE RKQRRMISNR ESARRSRMRK
101: QRHLDELWSQ VMWLRIENHQ LLDKLNNLSE SHDKVLQENA QLKEETFELK QVISDMQIQS PFSCFRDDII PIE

Arabidopsis Description

ATBZIP42BZIP42 [Source:UniProtKB/TrEMBL;Acc:A0A178VMH2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.