Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G293900.1 | Wheat | nucleus | 69.46 | 69.46 |
| CDY45843 | Canola | nucleus | 27.54 | 38.33 |
| Bra038341.1-P | Field mustard | nucleus | 27.54 | 38.33 |
| Bra026523.1-P | Field mustard | nucleus | 20.36 | 38.2 |
| TraesCS6B01G198700.1 | Wheat | nucleus | 38.32 | 36.16 |
| Zm00001d046664_P001 | Maize | nucleus | 40.12 | 35.83 |
| TraesCS7A01G391800.1 | Wheat | mitochondrion | 51.5 | 35.54 |
| KXG20422 | Sorghum | nucleus | 41.92 | 35.35 |
| CDX81569 | Canola | nucleus | 24.55 | 34.17 |
| TraesCS5B01G248400.1 | Wheat | nucleus | 33.53 | 29.02 |
| AT1G68880.1 | Thale cress | nucleus | 23.95 | 28.99 |
| Solyc03g046440.1.1 | Tomato | nucleus | 29.34 | 28.32 |
| Solyc02g089420.1.1 | Tomato | nucleus | 29.94 | 27.78 |
| CDX85297 | Canola | nucleus | 28.14 | 27.33 |
| PGSC0003DMT400003516 | Potato | nucleus | 29.34 | 27.22 |
| AT3G30530.1 | Thale cress | nucleus | 28.14 | 27.17 |
| KRH71054 | Soybean | nucleus | 32.34 | 27.14 |
| TraesCS7B01G118500.1 | Wheat | nucleus | 29.34 | 26.63 |
| CDY16099 | Canola | nucleus | 25.75 | 26.38 |
| CDY66911 | Canola | nucleus | 26.95 | 26.16 |
| Bra006324.1-P | Field mustard | nucleus | 28.14 | 25.97 |
| KRH75199 | Soybean | nucleus | 30.54 | 25.76 |
| VIT_01s0010g00930.t01 | Wine grape | nucleus | 29.94 | 25.64 |
| Bra025418.1-P | Field mustard | nucleus | 26.35 | 25.58 |
| TraesCS7B01G086100.1 | Wheat | nucleus | 34.13 | 25.56 |
| CDX85530 | Canola | nucleus | 28.74 | 25.53 |
| Bra023540.1-P | Field mustard | nucleus | 28.74 | 25.53 |
| KRH45160 | Soybean | nucleus | 29.34 | 25.39 |
| PGSC0003DMT400019465 | Potato | nucleus | 29.34 | 25.26 |
| CDY35775 | Canola | nucleus | 25.75 | 25.15 |
| Bra020735.1-P | Field mustard | nucleus | 25.75 | 25.15 |
| CDY26467 | Canola | nucleus | 27.54 | 25.14 |
| Bra029353.1-P | Field mustard | mitochondrion, nucleus | 15.57 | 25.0 |
| CDX90970 | Canola | nucleus | 28.74 | 24.74 |
| AT5G15830.1 | Thale cress | nucleus | 27.54 | 24.73 |
| AT2G04038.1 | Thale cress | nucleus | 24.55 | 24.7 |
| KRH01443 | Soybean | nucleus | 28.74 | 24.62 |
| Bra008670.1-P | Field mustard | nucleus | 26.95 | 24.59 |
| CDX69495 | Canola | nucleus | 26.95 | 24.59 |
| CDY46496 | Canola | nucleus | 26.35 | 24.58 |
| AT5G38800.1 | Thale cress | nucleus | 23.95 | 24.24 |
| TraesCS6B01G318700.1 | Wheat | nucleus | 29.94 | 24.15 |
| CDX99780 | Canola | nucleus | 25.75 | 24.02 |
| CDX70639 | Canola | nucleus | 27.54 | 23.96 |
| VIT_14s0083g00700.t01 | Wine grape | nucleus | 28.14 | 23.74 |
| Bra017359.1-P | Field mustard | nucleus | 24.55 | 23.56 |
| CDX78655 | Canola | nucleus | 26.95 | 23.32 |
| CDY33124 | Canola | nucleus | 24.55 | 23.3 |
| CDY04169 | Canola | nucleus | 24.55 | 23.3 |
| CDX70656 | Canola | nucleus | 26.35 | 23.16 |
| Bra025144.1-P | Field mustard | nucleus | 23.35 | 22.94 |
| CDY48072 | Canola | nucleus | 23.35 | 22.94 |
| CDY71548 | Canola | nucleus | 23.35 | 22.94 |
| Solyc04g005170.1.1 | Tomato | nucleus | 25.75 | 22.51 |
| AT1G13600.1 | Thale cress | nucleus | 26.35 | 22.45 |
| Bra026895.1-P | Field mustard | nucleus | 25.75 | 22.05 |
| Bra026896.1-P | Field mustard | nucleus | 25.75 | 22.05 |
| Bra019715.1-P | Field mustard | nucleus | 25.15 | 21.76 |
| PGSC0003DMT400004821 | Potato | nucleus | 25.15 | 21.65 |
| CDX98108 | Canola | nucleus | 25.15 | 21.21 |
| CDY45336 | Canola | nucleus | 25.15 | 21.21 |
| CDY37559 | Canola | nucleus | 25.15 | 21.21 |
| AT5G08141.1 | Thale cress | nucleus | 17.37 | 21.17 |
| KRH18312 | Soybean | nucleus | 26.95 | 21.03 |
| KRG93749 | Soybean | nucleus | 27.54 | 20.91 |
| Bra005971.1-P | Field mustard | nucleus | 19.76 | 20.62 |
| CDY66792 | Canola | nucleus | 19.76 | 20.12 |
| CDY40812 | Canola | nucleus | 20.36 | 19.21 |
| CDY42835 | Canola | nucleus | 19.76 | 18.64 |
| CDY02193 | Canola | nucleus | 20.36 | 18.58 |
| CDX78324 | Canola | nucleus | 18.56 | 18.24 |
| AT5G60830.1 | Thale cress | nucleus | 21.56 | 17.48 |
| Bra013005.1-P | Field mustard | nucleus | 18.56 | 17.03 |
| Bra035957.1-P | Field mustard | nucleus | 18.56 | 16.85 |
| CDY51629 | Canola | nucleus | 17.96 | 15.87 |
| CDX70638 | Canola | nucleus | 14.97 | 15.43 |
| KRH56749 | Soybean | nucleus | 19.76 | 15.42 |
| CDY16837 | Canola | nucleus | 20.36 | 15.38 |
| KRH63157 | Soybean | nucleus | 14.97 | 14.97 |
| CDX87188 | Canola | nucleus | 19.16 | 14.68 |
| KRH03190 | Soybean | cytosol, mitochondrion | 8.98 | 14.42 |
| CDX70640 | Canola | nucleus | 13.17 | 13.84 |
Protein Annotations
| EnsemblPlants:TraesCS7B01G293700.1 | EnsemblPlantsGene:TraesCS7B01G293700 | Gene3D:1.20.5.170 | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR004827 |
| InterPro:bZIP | ncoils:Coil | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF138 | PFAM:PF00170 | PFscan:PS50217 |
| ScanProsite:PS00036 | SEG:seg | SMART:SM00338 | SUPFAM:SSF57959 | MapMan:15.5.4.1 | : |
Description
No Description!
Coordinates
chr7B:-:530434419..530434922
Molecular Weight (calculated)
18025.0 Da
IEP (calculated)
8.265
GRAVY (calculated)
-0.650
Length
167 amino acids
Sequence
(BLAST)
(BLAST)
001: MQQELAALAY QSAGFVGLPT SYLPPHPHDV DVDLVDGWLV GGSAGAGDNG HGPPSCGSGL SHVAGAAAAV SETRKARRLA SNRESARRSR MRRRRQLDEL
101: SACAAELRAA NQRLVVELNR AEARHAQVAR ENARLREELR RLRERLAAEE ETTDRDAGDE AAAARTP
101: SACAAELRAA NQRLVVELNR AEARHAQVAR ENARLREELR RLRERLAAEE ETTDRDAGDE AAAARTP
001: MQPNYDSSSL NNMQQQDYFN LNNYYNNLNP STNNNNLNIL QYPQIQELNL QSPVSNNSTT SDDATEEIFV INERKQRRMV SNRESARRSR MRKQRHLDEL
101: LSQVAWLRSE NHQLLDKLNQ VSDNNDLVIQ ENSSLKEENL ELRQVITSMK KLGGGIHDKY SSPSSMDELD QDFSSITDDP RTHHPS
101: LSQVAWLRSE NHQLLDKLNQ VSDNNDLVIQ ENSSLKEENL ELRQVITSMK KLGGGIHDKY SSPSSMDELD QDFSSITDDP RTHHPS
Arabidopsis Description
AtbZIP3At5g15830 [Source:UniProtKB/TrEMBL;Acc:Q9LFU3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.