Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU6Hr1G072490.1 | Barley | nucleus | 64.73 | 68.37 |
| TraesCS6D01G270000.1 | Wheat | nucleus | 64.25 | 66.83 |
| TraesCS6A01G288900.1 | Wheat | nucleus | 63.77 | 64.08 |
| HORVU1Hr1G013620.1 | Barley | nucleus | 43.96 | 50.0 |
| HORVU2Hr1G098530.1 | Barley | nucleus | 41.55 | 48.59 |
| GSMUA_Achr9P14690_001 | Banana | nucleus | 35.75 | 47.44 |
| Bra026523.1-P | Field mustard | nucleus | 20.29 | 47.19 |
| TraesCS7B01G118500.1 | Wheat | nucleus | 39.13 | 44.02 |
| GSMUA_Achr8P23510_001 | Banana | nucleus | 32.37 | 41.61 |
| GSMUA_Achr6P36230_001 | Banana | nucleus | 34.3 | 40.57 |
| GSMUA_Achr5P05350_001 | Banana | nucleus | 30.92 | 39.02 |
| TraesCS5B01G248400.1 | Wheat | nucleus | 36.23 | 38.86 |
| Bra038341.1-P | Field mustard | nucleus | 20.77 | 35.83 |
| CDY45843 | Canola | nucleus | 20.77 | 35.83 |
| TraesCS7B01G086100.1 | Wheat | nucleus | 37.68 | 34.98 |
| PGSC0003DMT400003516 | Potato | nucleus | 28.99 | 33.33 |
| CDX81569 | Canola | nucleus | 19.32 | 33.33 |
| PGSC0003DMT400019465 | Potato | nucleus | 30.92 | 32.99 |
| CDY46496 | Canola | nucleus | 28.5 | 32.96 |
| Solyc02g089420.1.1 | Tomato | nucleus | 28.5 | 32.78 |
| AT1G68880.1 | Thale cress | nucleus | 21.74 | 32.61 |
| CDX99780 | Canola | nucleus | 28.02 | 32.4 |
| VIT_14s0083g00700.t01 | Wine grape | nucleus | 30.92 | 32.32 |
| KRH01443 | Soybean | nucleus | 29.95 | 31.79 |
| CDY71548 | Canola | nucleus | 26.09 | 31.76 |
| TraesCS7B01G293900.1 | Wheat | nucleus | 25.6 | 31.74 |
| CDX85297 | Canola | nucleus | 26.09 | 31.4 |
| AT2G04038.1 | Thale cress | nucleus | 25.12 | 31.33 |
| CDY33124 | Canola | nucleus | 26.57 | 31.25 |
| CDY04169 | Canola | nucleus | 26.57 | 31.25 |
| CDY48072 | Canola | nucleus | 25.6 | 31.18 |
| Bra025144.1-P | Field mustard | nucleus | 25.6 | 31.18 |
| KRH45160 | Soybean | nucleus | 28.99 | 31.09 |
| Solyc03g046440.1.1 | Tomato | nucleus | 25.6 | 30.64 |
| Bra017359.1-P | Field mustard | nucleus | 25.6 | 30.46 |
| AT5G38800.1 | Thale cress | nucleus | 24.15 | 30.3 |
| VIT_01s0010g00930.t01 | Wine grape | nucleus | 28.5 | 30.26 |
| AT3G30530.1 | Thale cress | nucleus | 25.12 | 30.06 |
| TraesCS7B01G293700.1 | Wheat | nucleus | 24.15 | 29.94 |
| Bra020735.1-P | Field mustard | nucleus | 24.64 | 29.82 |
| CDY35775 | Canola | nucleus | 24.64 | 29.82 |
| Bra029353.1-P | Field mustard | mitochondrion, nucleus | 14.98 | 29.81 |
| CDY66911 | Canola | nucleus | 24.64 | 29.65 |
| CDY16099 | Canola | nucleus | 23.19 | 29.45 |
| Bra025418.1-P | Field mustard | nucleus | 24.15 | 29.07 |
| AT5G15830.1 | Thale cress | nucleus | 26.09 | 29.03 |
| KRH75199 | Soybean | nucleus | 27.54 | 28.79 |
| CDX85530 | Canola | nucleus | 26.09 | 28.72 |
| Bra023540.1-P | Field mustard | nucleus | 26.09 | 28.72 |
| Bra008670.1-P | Field mustard | nucleus | 25.12 | 28.42 |
| CDX69495 | Canola | nucleus | 25.12 | 28.42 |
| CDY26467 | Canola | nucleus | 25.12 | 28.42 |
| KRH71054 | Soybean | nucleus | 27.05 | 28.14 |
| KRH18312 | Soybean | nucleus | 28.99 | 28.04 |
| TraesCS6B01G198700.1 | Wheat | nucleus | 23.67 | 27.68 |
| CDX90970 | Canola | nucleus | 25.6 | 27.32 |
| KRG93749 | Soybean | nucleus | 28.99 | 27.27 |
| CDX70639 | Canola | nucleus | 25.12 | 27.08 |
| Solyc04g005170.1.1 | Tomato | nucleus | 24.64 | 26.7 |
| Bra006324.1-P | Field mustard | nucleus | 23.19 | 26.52 |
| CDX78655 | Canola | nucleus | 24.64 | 26.42 |
| CDX70656 | Canola | nucleus | 24.15 | 26.32 |
| PGSC0003DMT400004821 | Potato | nucleus | 24.64 | 26.29 |
| AT1G13600.1 | Thale cress | nucleus | 23.67 | 25.0 |
| Bra026896.1-P | Field mustard | nucleus | 23.19 | 24.62 |
| Bra026895.1-P | Field mustard | nucleus | 23.19 | 24.62 |
| Bra019715.1-P | Field mustard | nucleus | 22.22 | 23.83 |
| CDX98108 | Canola | nucleus | 22.22 | 23.23 |
| CDY37559 | Canola | nucleus | 22.22 | 23.23 |
| CDY45336 | Canola | nucleus | 22.22 | 23.23 |
| CDY40812 | Canola | nucleus | 19.81 | 23.16 |
| CDY42835 | Canola | nucleus | 19.81 | 23.16 |
| Bra005971.1-P | Field mustard | nucleus | 17.87 | 23.12 |
| Bra013005.1-P | Field mustard | nucleus | 20.29 | 23.08 |
| AT5G60830.1 | Thale cress | nucleus | 21.74 | 21.84 |
| Bra035957.1-P | Field mustard | nucleus | 19.32 | 21.74 |
| CDY51629 | Canola | nucleus | 19.81 | 21.69 |
| CDY02193 | Canola | nucleus | 18.36 | 20.77 |
| AT5G08141.1 | Thale cress | nucleus | 13.53 | 20.44 |
| CDY66792 | Canola | nucleus | 15.94 | 20.12 |
| CDX78324 | Canola | nucleus | 16.43 | 20.0 |
| CDX87188 | Canola | nucleus | 20.29 | 19.27 |
| KRH03190 | Soybean | cytosol, mitochondrion | 9.66 | 19.23 |
| KRH63157 | Soybean | nucleus | 15.46 | 19.16 |
| KRH56749 | Soybean | nucleus | 18.84 | 18.22 |
| CDY16837 | Canola | nucleus | 17.87 | 16.74 |
| CDX70638 | Canola | nucleus | 13.04 | 16.67 |
| CDX70640 | Canola | nucleus | 12.08 | 15.72 |
Protein Annotations
| EnsemblPlants:TraesCS6B01G318700.1 | EnsemblPlantsGene:TraesCS6B01G318700 | Gene3D:1.20.5.170 | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR004827 |
| InterPro:bZIP | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF363 | PFAM:PF00170 | PFscan:PS50217 | ScanProsite:PS00036 |
| SEG:seg | SMART:SM00338 | SUPFAM:SSF57959 | TIGR:cd14702 | MapMan:15.5.4.1 | : |
Description
No Description!
Coordinates
chr6B:+:566535114..566536010
Molecular Weight (calculated)
22990.0 Da
IEP (calculated)
7.017
GRAVY (calculated)
-0.533
Length
207 amino acids
Sequence
(BLAST)
(BLAST)
001: MYPAELASVP YLSAATATAA FRPHYQVAPD DFLFQYNGGG LLVPQATSPP CSSYQQHDVV GQLLHEAAGG GLLLPFGARS SNSDESDEYH HHHQAAHCSS
101: SLAEERRRRR MVSNRESARR SRMRKQKQLS ELWAQVVHLR GANRQLLDQL NRVIRDCDRV LRDNSGLRAE QAELRERLEK LPAVPVAVAV EEAGQVELAA
201: AQGDMID
101: SLAEERRRRR MVSNRESARR SRMRKQKQLS ELWAQVVHLR GANRQLLDQL NRVIRDCDRV LRDNSGLRAE QAELRERLEK LPAVPVAVAV EEAGQVELAA
201: AQGDMID
001: MIPAEINGYF QYLSPEYNVI NMPSSPTSSL NYLNDLIINN NNYSSSSNSQ DLMISNNSTS DEDHHQSIMV LDERKQRRML SNRESARRSR MRKQRHLDEL
101: WSQVIRLRNE NNCLIDKLNR VSETQNCVLK ENSKLKEEAS DLRQLVCELK SNKNNNNSFP REFEDN
101: WSQVIRLRNE NNCLIDKLNR VSETQNCVLK ENSKLKEEAS DLRQLVCELK SNKNNNNSFP REFEDN
Arabidopsis Description
AtbZIP48BZIP48 [Source:UniProtKB/TrEMBL;Acc:A0A178VS52]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.