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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • plastid 1
  • nucleus 3
  • mitochondrion 1
PPI

Inferred distinct locusB in Crop

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra026523.1-P Field mustard nucleus 49.72 100.0
CDY46496 Canola nucleus 94.41 94.41
CDY71548 Canola nucleus 73.18 77.06
CDY48072 Canola nucleus 73.18 77.06
CDY33124 Canola nucleus 72.63 73.86
CDY04169 Canola nucleus 72.63 73.86
AT2G04038.1 Thale cress nucleus 60.34 65.06
CDY45336 Canola nucleus 60.34 54.55
CDY37559 Canola nucleus 59.22 53.54
CDX98108 Canola nucleus 59.22 53.54
CDY16099 Canola nucleus 41.9 46.01
CDY45843 Canola nucleus 28.49 42.5
CDX81569 Canola nucleus 27.93 41.67
VIT_01s0010g00930.t01 Wine grape nucleus 44.69 41.03
CDY35775 Canola nucleus 38.55 40.35
PGSC0003DMT400019465 Potato nucleus 43.58 40.21
CDX85297 Canola nucleus 38.55 40.12
CDY66911 Canola nucleus 37.43 38.95
KRH71054 Soybean nucleus 41.34 37.19
KRH75199 Soybean nucleus 40.22 36.36
CDX85530 Canola nucleus 37.43 35.64
Solyc04g005170.1.1 Tomato nucleus 37.99 35.6
CDX70656 Canola nucleus 37.43 35.26
PGSC0003DMT400004821 Potato nucleus 37.99 35.05
CDX78655 Canola nucleus 37.43 34.72
GSMUA_Achr9P14690_001 Banana nucleus 30.17 34.62
CDX69495 Canola nucleus 35.2 34.43
CDX90970 Canola nucleus 36.87 34.02
CDY26467 Canola nucleus 34.64 33.88
GSMUA_Achr8P23510_001 Banana nucleus 30.17 33.54
CDX70639 Canola nucleus 35.75 33.33
EES07324 Sorghum nucleus 29.61 31.36
Zm00001d052807_P001 Maize nucleus 24.58 31.21
GSMUA_Achr5P05350_001 Banana nucleus 28.49 31.1
Zm00001d015664_P001 Maize nucleus 28.49 30.36
Os02t0728001-00 Rice nucleus 27.93 29.59
Zm00001d017911_P001 Maize nucleus 28.49 28.98
TraesCS7B01G118500.1 Wheat nucleus 29.61 28.8
TraesCS7D01G213200.1 Wheat nucleus 29.61 28.8
TraesCS6D01G270000.1 Wheat nucleus 31.28 28.14
TraesCS7A01G211500.1 Wheat nucleus 29.05 28.11
TraesCS6B01G318700.1 Wheat nucleus 32.4 28.02
GSMUA_Achr6P36230_001 Banana nucleus 27.37 28.0
Os09t0474000-01 Rice nucleus 26.82 27.75
HORVU6Hr1G072490.1 Barley nucleus 30.17 27.55
TraesCS7B01G293900.1 Wheat nucleus 25.7 27.54
TraesCS6B01G198700.1 Wheat nucleus 26.82 27.12
HORVU1Hr1G013620.1 Barley nucleus 27.37 26.92
Zm00001d005962_P001 Maize nucleus, plastid 24.58 26.83
Zm00001d051739_P001 Maize nucleus 22.35 26.67
TraesCS6D01G160200.1 Wheat nucleus 25.7 26.14
Os02t0191600-00 Rice nucleus 29.05 26.13
HORVU7Hr1G043080.1 Barley nucleus 27.93 25.77
TraesCS7B01G293700.1 Wheat nucleus 24.02 25.75
TraesCS6A01G288900.1 Wheat nucleus 29.61 25.73
HORVU2Hr1G098530.1 Barley nucleus 25.14 25.42
TraesCS6A01G170600.1 Wheat nucleus 25.14 25.42
TraesCS5B01G248400.1 Wheat nucleus 27.37 25.39
HORVU5Hr1G070540.1 Barley nucleus 26.82 25.0
KXG19789 Sorghum nucleus 26.26 25.0
TraesCS5A01G250400.1 Wheat nucleus 27.37 25.0
Zm00001d037360_P001 Maize nucleus 27.37 24.75
TraesCS5D01G258000.1 Wheat nucleus 25.7 23.83
EES06428 Sorghum nucleus 23.46 23.73
EER96905 Sorghum nucleus 24.58 23.66
Zm00001d020823_P001 Maize nucleus 25.7 23.59
Zm00001d053703_P001 Maize nucleus 22.91 23.3
Zm00001d031272_P001 Maize nucleus 26.26 23.27
CDY66792 Canola nucleus 21.23 23.17
CDY40812 Canola nucleus 22.35 22.6
TraesCS7A01G181100.1 Wheat nucleus 27.37 22.58
CDX78324 Canola nucleus 21.23 22.35
TraesCS7D01G182900.1 Wheat nucleus 27.37 22.17
KXG25724 Sorghum nucleus 28.49 22.08
CDY42835 Canola nucleus 21.79 22.03
HORVU6Hr1G034810.1 Barley nucleus 26.26 21.96
CDY02193 Canola nucleus 22.35 21.86
Os08t0487100-01 Rice nucleus 27.93 21.74
KXG20422 Sorghum nucleus 24.02 21.72
CDY51629 Canola nucleus 22.91 21.69
CDX70638 Canola nucleus 19.55 21.6
Zm00001d046664_P001 Maize nucleus 22.35 21.39
CDX87188 Canola nucleus 24.58 20.18
CDX70640 Canola nucleus 17.88 20.13
TraesCS7B01G086100.1 Wheat nucleus 24.58 19.73
HORVU7Hr1G037230.2 Barley nucleus 24.02 19.37
TraesCS7A01G391800.1 Wheat mitochondrion 25.7 19.01
CDY16837 Canola nucleus 22.35 18.1
Protein Annotations
Gene3D:1.20.5.170MapMan:15.5.4.1GO:A0A078ECG6EnsemblPlants:CDX99780ProteinID:CDX99780ProteinID:CDX99780.1
ncoils:CoilGO:GO:0003674GO:GO:0003700GO:GO:0006139GO:GO:0006355GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0009987EnsemblPlantsGene:GSBRNA2T00108447001InterPro:IPR004827PFAM:PF00170
ScanProsite:PS00036PFscan:PS50217PANTHER:PTHR22952PANTHER:PTHR22952:SF133SMART:SM00338SUPFAM:SSF57959
UniParc:UPI0004EF2F19InterPro:bZIPSEG:seg:::
Description
BnaC02g35400D
Coordinates
chrLK031913:-:1129286..1129825
Molecular Weight (calculated)
20930.5 Da
IEP (calculated)
6.681
GRAVY (calculated)
-0.941
Length
179 amino acids
Sequence
(BLAST)
001: MIPAEITGYY QYLSPENLAT LPAEFNIINM PSSPTSSSSL TYLNDLINNN YSSSFIRQDL MMSNNSTSDE DPQHHHHQSI IIVDERKQRR MLSNRESARR
101: SRMRKQRHLD ELWSQVIRLR NENNCLIDKL NRVSETQDSV LKENSKLKEE ASELRQLVCE LKSNKNSDDD NNFVRKLSE
Best Arabidopsis Sequence Match ( AT2G04038.1 )
(BLAST)
001: MIPAEINGYF QYLSPEYNVI NMPSSPTSSL NYLNDLIINN NNYSSSSNSQ DLMISNNSTS DEDHHQSIMV LDERKQRRML SNRESARRSR MRKQRHLDEL
101: WSQVIRLRNE NNCLIDKLNR VSETQNCVLK ENSKLKEEAS DLRQLVCELK SNKNNNNSFP REFEDN
Arabidopsis Description
AtbZIP48BZIP48 [Source:UniProtKB/TrEMBL;Acc:A0A178VS52]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.