Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G086100.1 | Wheat | nucleus | 86.49 | 86.1 |
| TraesCS7D01G182900.1 | Wheat | nucleus | 63.96 | 64.25 |
| TraesCS7A01G181100.1 | Wheat | nucleus | 59.01 | 60.37 |
| Zm00001d031272_P001 | Maize | nucleus | 45.05 | 49.51 |
| Zm00001d052807_P001 | Maize | nucleus | 31.08 | 48.94 |
| Os08t0487100-01 | Rice | nucleus | 47.75 | 46.09 |
| KXG25724 | Sorghum | nucleus | 47.75 | 45.89 |
| HORVU5Hr1G070540.1 | Barley | nucleus | 39.64 | 45.83 |
| HORVU6Hr1G072490.1 | Barley | nucleus | 37.39 | 42.35 |
| GSMUA_Achr9P14690_001 | Banana | nucleus | 27.03 | 38.46 |
| Bra026523.1-P | Field mustard | nucleus | 15.32 | 38.2 |
| CDY45843 | Canola | nucleus | 20.27 | 37.5 |
| Bra038341.1-P | Field mustard | nucleus | 20.27 | 37.5 |
| CDX81569 | Canola | nucleus | 19.82 | 36.67 |
| HORVU2Hr1G098530.1 | Barley | nucleus | 28.83 | 36.16 |
| GSMUA_Achr8P23510_001 | Banana | nucleus | 26.13 | 36.02 |
| GSMUA_Achr6P36230_001 | Banana | nucleus | 27.93 | 35.43 |
| GSMUA_Achr5P05350_001 | Banana | nucleus | 25.23 | 34.15 |
| HORVU1Hr1G013620.1 | Barley | nucleus | 27.48 | 33.52 |
| Solyc02g089420.1.1 | Tomato | nucleus | 27.03 | 33.33 |
| AT1G68880.1 | Thale cress | nucleus | 20.72 | 33.33 |
| PGSC0003DMT400003516 | Potato | nucleus | 26.13 | 32.22 |
| CDX85297 | Canola | nucleus | 24.77 | 31.98 |
| HORVU7Hr1G043080.1 | Barley | nucleus | 27.48 | 31.44 |
| CDY66911 | Canola | nucleus | 23.42 | 30.23 |
| Bra020735.1-P | Field mustard | nucleus | 22.52 | 29.24 |
| CDY35775 | Canola | nucleus | 22.52 | 29.24 |
| Solyc03g046440.1.1 | Tomato | nucleus | 22.52 | 28.9 |
| Bra029353.1-P | Field mustard | mitochondrion, nucleus | 13.51 | 28.85 |
| Bra025144.1-P | Field mustard | nucleus | 22.07 | 28.82 |
| CDY48072 | Canola | nucleus | 22.07 | 28.82 |
| Bra025418.1-P | Field mustard | nucleus | 22.07 | 28.49 |
| AT5G38800.1 | Thale cress | nucleus | 21.17 | 28.48 |
| Bra008670.1-P | Field mustard | nucleus | 23.42 | 28.42 |
| CDX69495 | Canola | nucleus | 23.42 | 28.42 |
| AT3G30530.1 | Thale cress | nucleus | 22.07 | 28.32 |
| CDY16099 | Canola | nucleus | 20.72 | 28.22 |
| AT2G04038.1 | Thale cress | nucleus | 20.72 | 27.71 |
| CDY71548 | Canola | nucleus | 21.17 | 27.65 |
| CDY26467 | Canola | nucleus | 22.52 | 27.32 |
| CDY33124 | Canola | nucleus | 21.62 | 27.27 |
| VIT_14s0083g00700.t01 | Wine grape | nucleus | 24.32 | 27.27 |
| CDY04169 | Canola | nucleus | 21.62 | 27.27 |
| Solyc04g005170.1.1 | Tomato | nucleus | 23.42 | 27.23 |
| KRH01443 | Soybean | nucleus | 23.87 | 27.18 |
| KRH45160 | Soybean | nucleus | 23.42 | 26.94 |
| PGSC0003DMT400019465 | Potato | nucleus | 23.42 | 26.8 |
| Bra023540.1-P | Field mustard | nucleus | 22.52 | 26.6 |
| CDX85530 | Canola | nucleus | 22.52 | 26.6 |
| Bra017359.1-P | Field mustard | nucleus | 20.72 | 26.44 |
| AT5G15830.1 | Thale cress | nucleus | 22.07 | 26.34 |
| VIT_01s0010g00930.t01 | Wine grape | nucleus | 22.97 | 26.15 |
| Bra006324.1-P | Field mustard | nucleus | 21.17 | 25.97 |
| CDX90970 | Canola | nucleus | 22.52 | 25.77 |
| PGSC0003DMT400004821 | Potato | nucleus | 22.52 | 25.77 |
| KRH75199 | Soybean | nucleus | 22.97 | 25.76 |
| KRH71054 | Soybean | nucleus | 22.97 | 25.63 |
| CDX70639 | Canola | nucleus | 21.62 | 25.0 |
| CDX70656 | Canola | nucleus | 20.72 | 24.21 |
| Bra026895.1-P | Field mustard | nucleus | 21.17 | 24.1 |
| Bra026896.1-P | Field mustard | nucleus | 21.17 | 24.1 |
| CDY46496 | Canola | nucleus | 19.37 | 24.02 |
| CDX99780 | Canola | nucleus | 19.37 | 24.02 |
| AT1G13600.1 | Thale cress | nucleus | 21.17 | 23.98 |
| CDX78655 | Canola | nucleus | 20.72 | 23.83 |
| KRH18312 | Soybean | nucleus | 22.97 | 23.83 |
| AT5G60830.1 | Thale cress | nucleus | 22.07 | 23.79 |
| KRG93749 | Soybean | nucleus | 23.42 | 23.64 |
| Bra019715.1-P | Field mustard | nucleus | 20.27 | 23.32 |
| CDY42835 | Canola | nucleus | 18.47 | 23.16 |
| Bra013005.1-P | Field mustard | nucleus | 18.92 | 23.08 |
| CDY02193 | Canola | nucleus | 18.92 | 22.95 |
| CDY45336 | Canola | nucleus | 20.27 | 22.73 |
| CDY37559 | Canola | nucleus | 20.27 | 22.73 |
| CDX98108 | Canola | nucleus | 20.27 | 22.73 |
| CDY40812 | Canola | nucleus | 18.02 | 22.6 |
| HORVU6Hr1G034810.1 | Barley | nucleus | 21.62 | 22.43 |
| CDX78324 | Canola | nucleus | 17.12 | 22.35 |
| Bra005971.1-P | Field mustard | nucleus | 15.77 | 21.88 |
| Bra035957.1-P | Field mustard | nucleus | 18.02 | 21.74 |
| CDY51629 | Canola | nucleus | 18.47 | 21.69 |
| AT5G08141.1 | Thale cress | nucleus | 13.06 | 21.17 |
| CDY66792 | Canola | nucleus | 14.41 | 19.51 |
| KRH03190 | Soybean | cytosol, mitochondrion | 9.01 | 19.23 |
| KRH56749 | Soybean | nucleus | 18.47 | 19.16 |
| CDX87188 | Canola | nucleus | 18.02 | 18.35 |
| CDY16837 | Canola | nucleus | 18.02 | 18.1 |
| KRH63157 | Soybean | nucleus | 12.16 | 16.17 |
| CDX70638 | Canola | nucleus | 10.81 | 14.81 |
| CDX70640 | Canola | nucleus | 9.91 | 13.84 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:HORVU7Hr1G037230 |
| EnsemblPlants:HORVU7Hr1G037230.2 | InterPro:IPR004827 | UniProt:M0XJG4 | PFAM:PF00170 | ScanProsite:PS00036 | PFscan:PS50217 |
| PANTHER:PTHR22952 | PANTHER:PTHR22952:SF191 | SMART:SM00338 | SUPFAM:SSF57959 | UniParc:UPI00029509CE | InterPro:bZIP |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr7H:-:88882112..88882780
Molecular Weight (calculated)
23819.5 Da
IEP (calculated)
6.712
GRAVY (calculated)
-0.626
Length
222 amino acids
Sequence
(BLAST)
(BLAST)
001: MYHYNNGDVA SFHFLPPPSP SSSFATHHHM NMTLPPQAYF PPSFDPAALL ADDDDVAAAF QFDAILVEEA AHLAGGSGSP SSGSDAGGGN YFQVGGAGPG
101: VGSAEEERRR RRMVSNRESA RRSRMRKQRQ LSELWAQVAH LRGANRRLLD ELNCALRGCA DACRESAQLR DEKAKLNEML EQLLQQSAPE KKAASSPASS
201: NHSSCSSEPC KNSTAAAASS TE
101: VGSAEEERRR RRMVSNRESA RRSRMRKQRQ LSELWAQVAH LRGANRRLLD ELNCALRGCA DACRESAQLR DEKAKLNEML EQLLQQSAPE KKAASSPASS
201: NHSSCSSEPC KNSTAAAASS TE
001: MQPSTNIFSL HGCPPSYLSH IPTSSPFCGQ NPNPFFSFET GVNTSQFMSL ISSNNSTSDE AEENHKEIIN ERKQKRKISN RESARRSRMR KQRQVDELWS
101: QVMWLRDENH QLLRKLNCVL ESQEKVIEEN VQLKEETTEL KQMISDMQLQ NQSPFSCIRD DDDVV
101: QVMWLRDENH QLLRKLNCVL ESQEKVIEEN VQLKEETTEL KQMISDMQLQ NQSPFSCIRD DDDVV
Arabidopsis Description
BZIP43Basic leucine zipper 43 [Source:UniProtKB/Swiss-Prot;Acc:Q9FMC2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.