Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU7Hr1G037230.2 | Barley | nucleus | 86.1 | 86.49 |
| TraesCS7D01G182900.1 | Wheat | nucleus | 63.23 | 63.8 |
| TraesCS7A01G181100.1 | Wheat | nucleus | 60.54 | 62.21 |
| Zm00001d052807_P001 | Maize | nucleus | 33.18 | 52.48 |
| Zm00001d031272_P001 | Maize | nucleus | 47.53 | 52.48 |
| Os08t0487100-01 | Rice | nucleus | 47.98 | 46.52 |
| TraesCS5B01G248400.1 | Wheat | nucleus | 39.91 | 46.11 |
| KXG25724 | Sorghum | nucleus | 47.53 | 45.89 |
| GSMUA_Achr9P14690_001 | Banana | nucleus | 28.25 | 40.38 |
| Bra026523.1-P | Field mustard | nucleus | 15.7 | 39.33 |
| CDY45843 | Canola | nucleus | 21.08 | 39.17 |
| Bra038341.1-P | Field mustard | nucleus | 21.08 | 39.17 |
| TraesCS6B01G318700.1 | Wheat | nucleus | 34.98 | 37.68 |
| CDX81569 | Canola | nucleus | 20.18 | 37.5 |
| GSMUA_Achr8P23510_001 | Banana | nucleus | 25.56 | 35.4 |
| GSMUA_Achr5P05350_001 | Banana | nucleus | 26.01 | 35.37 |
| GSMUA_Achr6P36230_001 | Banana | nucleus | 26.91 | 34.29 |
| TraesCS7B01G293700.1 | Wheat | nucleus | 25.56 | 34.13 |
| TraesCS7B01G293900.1 | Wheat | nucleus | 25.56 | 34.13 |
| TraesCS7B01G118500.1 | Wheat | nucleus | 27.8 | 33.7 |
| Solyc02g089420.1.1 | Tomato | nucleus | 26.46 | 32.78 |
| AT1G68880.1 | Thale cress | nucleus | 19.73 | 31.88 |
| PGSC0003DMT400003516 | Potato | nucleus | 25.56 | 31.67 |
| CDX85297 | Canola | nucleus | 24.22 | 31.4 |
| TraesCS6B01G198700.1 | Wheat | nucleus | 24.22 | 30.51 |
| CDY66911 | Canola | nucleus | 23.32 | 30.23 |
| Solyc03g046440.1.1 | Tomato | nucleus | 22.87 | 29.48 |
| CDY04169 | Canola | nucleus | 22.87 | 28.98 |
| CDY33124 | Canola | nucleus | 22.87 | 28.98 |
| AT3G30530.1 | Thale cress | nucleus | 22.42 | 28.9 |
| Bra020735.1-P | Field mustard | nucleus | 21.97 | 28.66 |
| CDX69495 | Canola | nucleus | 23.32 | 28.42 |
| Bra008670.1-P | Field mustard | nucleus | 23.32 | 28.42 |
| AT2G04038.1 | Thale cress | nucleus | 21.08 | 28.31 |
| CDY48072 | Canola | nucleus | 21.52 | 28.24 |
| Bra025144.1-P | Field mustard | nucleus | 21.52 | 28.24 |
| CDY16099 | Canola | nucleus | 20.63 | 28.22 |
| CDY35775 | Canola | nucleus | 21.52 | 28.07 |
| Bra025418.1-P | Field mustard | nucleus | 21.52 | 27.91 |
| Bra029353.1-P | Field mustard | mitochondrion, nucleus | 13.0 | 27.88 |
| KRH01443 | Soybean | nucleus | 23.77 | 27.18 |
| CDY71548 | Canola | nucleus | 20.63 | 27.06 |
| Bra017359.1-P | Field mustard | nucleus | 21.08 | 27.01 |
| KRH45160 | Soybean | nucleus | 23.32 | 26.94 |
| CDY26467 | Canola | nucleus | 21.97 | 26.78 |
| Solyc04g005170.1.1 | Tomato | nucleus | 22.87 | 26.7 |
| AT5G38800.1 | Thale cress | nucleus | 19.73 | 26.67 |
| Bra023540.1-P | Field mustard | nucleus | 22.42 | 26.6 |
| CDX85530 | Canola | nucleus | 22.42 | 26.6 |
| AT5G15830.1 | Thale cress | nucleus | 21.97 | 26.34 |
| Bra006324.1-P | Field mustard | nucleus | 21.08 | 25.97 |
| PGSC0003DMT400019465 | Potato | nucleus | 22.42 | 25.77 |
| CDX90970 | Canola | nucleus | 22.42 | 25.77 |
| VIT_14s0083g00700.t01 | Wine grape | nucleus | 22.87 | 25.76 |
| VIT_01s0010g00930.t01 | Wine grape | nucleus | 22.42 | 25.64 |
| AT1G13600.1 | Thale cress | nucleus | 22.42 | 25.51 |
| PGSC0003DMT400004821 | Potato | nucleus | 21.97 | 25.26 |
| KRH75199 | Soybean | nucleus | 22.42 | 25.25 |
| KRH71054 | Soybean | nucleus | 22.42 | 25.13 |
| CDX70639 | Canola | nucleus | 21.52 | 25.0 |
| Bra026896.1-P | Field mustard | nucleus | 21.52 | 24.62 |
| Bra026895.1-P | Field mustard | nucleus | 21.52 | 24.62 |
| CDY46496 | Canola | nucleus | 19.73 | 24.58 |
| CDX99780 | Canola | nucleus | 19.73 | 24.58 |
| AT5G60830.1 | Thale cress | nucleus | 22.42 | 24.27 |
| CDX70656 | Canola | nucleus | 20.63 | 24.21 |
| Bra013005.1-P | Field mustard | nucleus | 19.73 | 24.18 |
| CDY02193 | Canola | nucleus | 19.73 | 24.04 |
| Bra019715.1-P | Field mustard | nucleus | 20.63 | 23.83 |
| CDX78655 | Canola | nucleus | 20.63 | 23.83 |
| KRG93749 | Soybean | nucleus | 23.32 | 23.64 |
| CDX98108 | Canola | nucleus | 20.63 | 23.23 |
| CDY37559 | Canola | nucleus | 20.63 | 23.23 |
| CDY45336 | Canola | nucleus | 20.63 | 23.23 |
| KRH18312 | Soybean | nucleus | 21.97 | 22.9 |
| CDY51629 | Canola | nucleus | 18.83 | 22.22 |
| CDY42835 | Canola | nucleus | 17.49 | 22.03 |
| AT5G08141.1 | Thale cress | nucleus | 13.45 | 21.9 |
| Bra005971.1-P | Field mustard | nucleus | 15.7 | 21.88 |
| CDX78324 | Canola | nucleus | 16.59 | 21.76 |
| CDY40812 | Canola | nucleus | 17.04 | 21.47 |
| KRH56749 | Soybean | nucleus | 19.73 | 20.56 |
| CDY66792 | Canola | nucleus | 14.8 | 20.12 |
| Bra035957.1-P | Field mustard | nucleus | 16.59 | 20.11 |
| KRH03190 | Soybean | cytosol, mitochondrion | 8.97 | 19.23 |
| CDX87188 | Canola | nucleus | 17.94 | 18.35 |
| CDY16837 | Canola | nucleus | 17.49 | 17.65 |
| KRH63157 | Soybean | nucleus | 12.11 | 16.17 |
| CDX70638 | Canola | nucleus | 10.31 | 14.2 |
| CDX70640 | Canola | nucleus | 9.87 | 13.84 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR004827 |
| PFAM:PF00170 | ScanProsite:PS00036 | PFscan:PS50217 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF191 | SMART:SM00338 |
| SUPFAM:SSF57959 | EnsemblPlantsGene:TraesCS7B01G086100 | EnsemblPlants:TraesCS7B01G086100.1 | InterPro:bZIP | TIGR:cd14702 | SEG:seg |
Description
No Description!
Coordinates
chr7B:-:99130439..99131110
Molecular Weight (calculated)
24068.9 Da
IEP (calculated)
8.283
GRAVY (calculated)
-0.735
Length
223 amino acids
Sequence
(BLAST)
(BLAST)
001: MYHHNNGEVA SFHFLPPPNP SSSFTTHHHM NMALPPQAYF PPTFDPAALL AGDDDVAAAF EFDAILLEEA AHLAGGNGSP SSGSDAGGGN YLQVGGPGAG
101: FGAAEEERRR RRMVSNRESA RRSRMRKQRQ LSELWAQVTH LRGANRRLLD ELNRALRGCA DARRESAQLR DEKAKLNEKL EQLLQQSAPE KKAASSSPPA
201: SSNHSGRSSE PCKSSTAAAA SIE
101: FGAAEEERRR RRMVSNRESA RRSRMRKQRQ LSELWAQVTH LRGANRRLLD ELNRALRGCA DARRESAQLR DEKAKLNEKL EQLLQQSAPE KKAASSSPPA
201: SSNHSGRSSE PCKSSTAAAA SIE
001: MNTIPAELTG YFHYLPPDKY NNQTPIMESE YFNMPSSPTS CSSFYHLNGL INNNNYSSSS NGQDLMTSNN STSDEDHQQS MVIDERKQRR MISNRESARR
101: SRMRKQRHLD ELWSQVIRLR TDNHCLMDKL NRVSESHELA LKENAKLKEE TSDLRQLISE IKSHNEDDNS FLRELEDSIS NSRSDSNQSG RDFELC
101: SRMRKQRHLD ELWSQVIRLR TDNHCLMDKL NRVSESHELA LKENAKLKEE TSDLRQLISE IKSHNEDDNS FLRELEDSIS NSRSDSNQSG RDFELC
Arabidopsis Description
AtbZIP58BZIP58 [Source:UniProtKB/TrEMBL;Acc:A0A178WP44]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.