Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G182900.1 | Wheat | nucleus | 77.88 | 76.47 |
| TraesCS7B01G086100.1 | Wheat | nucleus | 62.21 | 60.54 |
| HORVU7Hr1G037230.2 | Barley | nucleus | 60.37 | 59.01 |
| Zm00001d052807_P001 | Maize | nucleus | 36.41 | 56.03 |
| Os08t0487100-01 | Rice | nucleus | 58.06 | 54.78 |
| Zm00001d031272_P001 | Maize | nucleus | 45.62 | 49.01 |
| KXG25724 | Sorghum | nucleus | 48.85 | 45.89 |
| TraesCS5A01G250400.1 | Wheat | nucleus | 41.01 | 45.41 |
| GSMUA_Achr9P14690_001 | Banana | nucleus | 30.41 | 42.31 |
| GSMUA_Achr8P23510_001 | Banana | nucleus | 29.95 | 40.37 |
| Bra026523.1-P | Field mustard | nucleus | 16.13 | 39.33 |
| CDY45843 | Canola | nucleus | 21.2 | 38.33 |
| Bra038341.1-P | Field mustard | nucleus | 21.2 | 38.33 |
| GSMUA_Achr6P36230_001 | Banana | nucleus | 30.41 | 37.71 |
| CDX81569 | Canola | nucleus | 20.28 | 36.67 |
| GSMUA_Achr5P05350_001 | Banana | nucleus | 27.65 | 36.59 |
| TraesCS6A01G288900.1 | Wheat | nucleus | 33.18 | 34.95 |
| TraesCS7A01G211500.1 | Wheat | nucleus | 29.49 | 34.59 |
| Solyc02g089420.1.1 | Tomato | nucleus | 27.19 | 32.78 |
| CDX85297 | Canola | nucleus | 25.81 | 32.56 |
| PGSC0003DMT400003516 | Potato | nucleus | 26.73 | 32.22 |
| AT1G68880.1 | Thale cress | nucleus | 20.28 | 31.88 |
| TraesCS6A01G170600.1 | Wheat | nucleus | 25.81 | 31.64 |
| CDY66911 | Canola | nucleus | 24.88 | 31.4 |
| AT2G04038.1 | Thale cress | nucleus | 23.96 | 31.33 |
| AT3G30530.1 | Thale cress | nucleus | 24.88 | 31.21 |
| Bra020735.1-P | Field mustard | nucleus | 23.96 | 30.41 |
| Solyc03g046440.1.1 | Tomato | nucleus | 23.96 | 30.06 |
| CDY35775 | Canola | nucleus | 23.5 | 29.82 |
| Bra025418.1-P | Field mustard | nucleus | 23.5 | 29.65 |
| CDY16099 | Canola | nucleus | 22.12 | 29.45 |
| Bra025144.1-P | Field mustard | nucleus | 23.04 | 29.41 |
| CDY48072 | Canola | nucleus | 23.04 | 29.41 |
| AT5G38800.1 | Thale cress | nucleus | 22.12 | 29.09 |
| CDY71548 | Canola | nucleus | 22.58 | 28.82 |
| VIT_01s0010g00930.t01 | Wine grape | nucleus | 25.81 | 28.72 |
| PGSC0003DMT400019465 | Potato | nucleus | 25.35 | 28.35 |
| KRH75199 | Soybean | nucleus | 25.81 | 28.28 |
| Bra017359.1-P | Field mustard | nucleus | 22.58 | 28.16 |
| CDY46496 | Canola | nucleus | 23.04 | 27.93 |
| Bra029353.1-P | Field mustard | mitochondrion, nucleus | 13.36 | 27.88 |
| CDY33124 | Canola | nucleus | 22.58 | 27.84 |
| CDY04169 | Canola | nucleus | 22.58 | 27.84 |
| Solyc04g005170.1.1 | Tomato | nucleus | 24.42 | 27.75 |
| Bra006324.1-P | Field mustard | nucleus | 23.04 | 27.62 |
| CDX99780 | Canola | nucleus | 22.58 | 27.37 |
| PGSC0003DMT400004821 | Potato | nucleus | 23.96 | 26.8 |
| CDX69495 | Canola | nucleus | 22.58 | 26.78 |
| Bra008670.1-P | Field mustard | nucleus | 22.58 | 26.78 |
| VIT_14s0083g00700.t01 | Wine grape | nucleus | 24.42 | 26.77 |
| KRH01443 | Soybean | nucleus | 23.96 | 26.67 |
| KRH45160 | Soybean | nucleus | 23.5 | 26.42 |
| Bra019715.1-P | Field mustard | nucleus | 23.5 | 26.42 |
| Bra026896.1-P | Field mustard | nucleus | 23.5 | 26.15 |
| Bra026895.1-P | Field mustard | nucleus | 23.5 | 26.15 |
| AT1G13600.1 | Thale cress | nucleus | 23.5 | 26.02 |
| CDX70656 | Canola | nucleus | 22.58 | 25.79 |
| CDY37559 | Canola | nucleus | 23.5 | 25.76 |
| CDY45336 | Canola | nucleus | 23.5 | 25.76 |
| CDX98108 | Canola | nucleus | 23.5 | 25.76 |
| KRH71054 | Soybean | nucleus | 23.5 | 25.63 |
| AT5G15830.1 | Thale cress | nucleus | 21.66 | 25.27 |
| CDY26467 | Canola | nucleus | 21.2 | 25.14 |
| Bra023540.1-P | Field mustard | nucleus | 21.66 | 25.0 |
| CDX85530 | Canola | nucleus | 21.66 | 25.0 |
| CDX78655 | Canola | nucleus | 22.12 | 24.87 |
| CDY40812 | Canola | nucleus | 20.28 | 24.86 |
| CDX70639 | Canola | nucleus | 21.66 | 24.48 |
| CDY42835 | Canola | nucleus | 19.82 | 24.29 |
| CDX90970 | Canola | nucleus | 21.66 | 24.23 |
| KRH18312 | Soybean | nucleus | 23.5 | 23.83 |
| Bra013005.1-P | Field mustard | nucleus | 19.82 | 23.63 |
| CDY02193 | Canola | nucleus | 19.82 | 23.5 |
| AT5G60830.1 | Thale cress | nucleus | 22.12 | 23.3 |
| CDY51629 | Canola | nucleus | 19.82 | 22.75 |
| KRG93749 | Soybean | nucleus | 23.04 | 22.73 |
| AT5G08141.1 | Thale cress | nucleus | 14.29 | 22.63 |
| Bra035957.1-P | Field mustard | nucleus | 18.89 | 22.28 |
| KRH03190 | Soybean | cytosol, mitochondrion | 10.6 | 22.12 |
| TraesCS7A01G391800.1 | Wheat | mitochondrion | 24.42 | 21.9 |
| Bra005971.1-P | Field mustard | nucleus | 16.13 | 21.88 |
| KRH56749 | Soybean | nucleus | 21.2 | 21.5 |
| CDY66792 | Canola | nucleus | 16.13 | 21.34 |
| CDX78324 | Canola | nucleus | 15.67 | 20.0 |
| CDX87188 | Canola | nucleus | 19.35 | 19.27 |
| CDY16837 | Canola | nucleus | 17.97 | 17.65 |
| KRH63157 | Soybean | nucleus | 13.36 | 17.37 |
| CDX70638 | Canola | nucleus | 11.52 | 15.43 |
| CDX70640 | Canola | nucleus | 10.6 | 14.47 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR004827 |
| PFAM:PF00170 | ScanProsite:PS00036 | PFscan:PS50217 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF191 | SMART:SM00338 |
| SUPFAM:SSF57959 | EnsemblPlantsGene:TraesCS7A01G181100 | EnsemblPlants:TraesCS7A01G181100.1 | InterPro:bZIP | TIGR:cd14702 | SEG:seg |
Description
No Description!
Coordinates
chr7A:-:135901154..135901807
Molecular Weight (calculated)
23384.3 Da
IEP (calculated)
7.285
GRAVY (calculated)
-0.628
Length
217 amino acids
Sequence
(BLAST)
(BLAST)
001: MYHHNNGELA SFHFLPPPNP SSSFTTHHHM NMALPPQAYF PPSFDPAALL ADVDDVAAAF ELDAILLAEE AAHLAGGNGS PSSGSDAGGG SYLQVGGAGA
101: GVGAAEEERR RRRMVSNRES ARRSRMRKQR QLSELWAQVT HLRGANRRLL DELNRALCEC AGARRESAQL RDEKAKLNEK LEQLLQQSAP EKKASSNHSG
201: CSSEPCKNST AAAASIE
101: GVGAAEEERR RRRMVSNRES ARRSRMRKQR QLSELWAQVT HLRGANRRLL DELNRALCEC AGARRESAQL RDEKAKLNEK LEQLLQQSAP EKKASSNHSG
201: CSSEPCKNST AAAASIE
001: MNTIPAELTG YFHYLPPDKY NNQTPIMESE YFNMPSSPTS CSSFYHLNGL INNNNYSSSS NGQDLMTSNN STSDEDHQQS MVIDERKQRR MISNRESARR
101: SRMRKQRHLD ELWSQVIRLR TDNHCLMDKL NRVSESHELA LKENAKLKEE TSDLRQLISE IKSHNEDDNS FLRELEDSIS NSRSDSNQSG RDFELC
101: SRMRKQRHLD ELWSQVIRLR TDNHCLMDKL NRVSESHELA LKENAKLKEE TSDLRQLISE IKSHNEDDNS FLRELEDSIS NSRSDSNQSG RDFELC
Arabidopsis Description
AtbZIP58BZIP58 [Source:UniProtKB/TrEMBL;Acc:A0A178WP44]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.