Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G04038.1 | CDX98108 | AT1G13600.1 | 16709202 |
| AT2G04038.1 | CDY16099 | AT1G13600.1 | 16709202 |
| AT2G04038.1 | CDY37559 | AT1G13600.1 | 16709202 |
| AT2G04038.1 | CDY45336 | AT1G13600.1 | 16709202 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra025144.1-P | Field mustard | nucleus | 100.0 | 100.0 |
| CDY71548 | Canola | nucleus | 97.06 | 97.06 |
| CDY33124 | Canola | nucleus | 82.94 | 80.11 |
| CDY04169 | Canola | nucleus | 82.94 | 80.11 |
| CDX99780 | Canola | nucleus | 77.06 | 73.18 |
| CDY46496 | Canola | nucleus | 76.47 | 72.63 |
| AT2G04038.1 | Thale cress | nucleus | 66.47 | 68.07 |
| CDY45336 | Canola | nucleus | 60.0 | 51.52 |
| CDY37559 | Canola | nucleus | 59.41 | 51.01 |
| CDX98108 | Canola | nucleus | 59.41 | 51.01 |
| CDY16099 | Canola | nucleus | 40.59 | 42.33 |
| CDY35775 | Canola | nucleus | 41.18 | 40.94 |
| CDX81569 | Canola | nucleus | 28.82 | 40.83 |
| CDY45843 | Canola | nucleus | 28.82 | 40.83 |
| VIT_01s0010g00930.t01 | Wine grape | nucleus | 46.47 | 40.51 |
| PGSC0003DMT400019465 | Potato | nucleus | 45.88 | 40.21 |
| CDY66911 | Canola | nucleus | 40.59 | 40.12 |
| CDX85297 | Canola | nucleus | 40.59 | 40.12 |
| Solyc04g005170.1.1 | Tomato | nucleus | 42.35 | 37.7 |
| KRH71054 | Soybean | nucleus | 43.53 | 37.19 |
| PGSC0003DMT400004821 | Potato | nucleus | 40.59 | 35.57 |
| KRH75199 | Soybean | nucleus | 41.18 | 35.35 |
| GSMUA_Achr9P14690_001 | Banana | nucleus | 31.76 | 34.62 |
| CDY26467 | Canola | nucleus | 35.88 | 33.33 |
| Zm00001d052807_P001 | Maize | nucleus | 27.65 | 33.33 |
| CDX85530 | Canola | nucleus | 36.47 | 32.98 |
| GSMUA_Achr8P23510_001 | Banana | nucleus | 31.18 | 32.92 |
| CDX78655 | Canola | nucleus | 37.06 | 32.64 |
| CDX70656 | Canola | nucleus | 36.47 | 32.63 |
| CDX70639 | Canola | nucleus | 36.47 | 32.29 |
| CDX69495 | Canola | nucleus | 34.71 | 32.24 |
| EES07324 | Sorghum | nucleus | 31.18 | 31.36 |
| CDX90970 | Canola | nucleus | 35.29 | 30.93 |
| Zm00001d015664_P001 | Maize | nucleus | 30.0 | 30.36 |
| Os02t0728001-00 | Rice | nucleus | 30.0 | 30.18 |
| GSMUA_Achr5P05350_001 | Banana | nucleus | 27.65 | 28.66 |
| TraesCS6D01G160200.1 | Wheat | nucleus | 29.41 | 28.41 |
| TraesCS6A01G170600.1 | Wheat | nucleus | 29.41 | 28.25 |
| Zm00001d005962_P001 | Maize | nucleus, plastid | 27.06 | 28.05 |
| GSMUA_Achr6P36230_001 | Banana | nucleus | 28.82 | 28.0 |
| Zm00001d017911_P001 | Maize | nucleus | 28.82 | 27.84 |
| TraesCS6B01G198700.1 | Wheat | nucleus | 28.82 | 27.68 |
| TraesCS6D01G270000.1 | Wheat | nucleus | 32.35 | 27.64 |
| Zm00001d051739_P001 | Maize | nucleus | 24.12 | 27.33 |
| Os09t0474000-01 | Rice | nucleus | 27.65 | 27.17 |
| Os02t0191600-00 | Rice | nucleus | 31.76 | 27.14 |
| TraesCS7B01G118500.1 | Wheat | nucleus | 28.82 | 26.63 |
| TraesCS7D01G213200.1 | Wheat | nucleus | 28.82 | 26.63 |
| HORVU2Hr1G098530.1 | Barley | nucleus | 27.65 | 26.55 |
| HORVU6Hr1G072490.1 | Barley | nucleus | 30.59 | 26.53 |
| TraesCS7A01G211500.1 | Wheat | nucleus | 28.82 | 26.49 |
| TraesCS6A01G288900.1 | Wheat | nucleus | 31.18 | 25.73 |
| TraesCS6B01G318700.1 | Wheat | nucleus | 31.18 | 25.6 |
| HORVU1Hr1G013620.1 | Barley | nucleus | 27.06 | 25.27 |
| TraesCS7B01G293900.1 | Wheat | nucleus | 24.71 | 25.15 |
| KXG19789 | Sorghum | nucleus | 27.65 | 25.0 |
| HORVU5Hr1G070540.1 | Barley | nucleus | 28.24 | 25.0 |
| TraesCS5A01G250400.1 | Wheat | nucleus | 28.82 | 25.0 |
| EES06428 | Sorghum | nucleus | 25.88 | 24.86 |
| CDY40812 | Canola | nucleus | 25.88 | 24.86 |
| HORVU7Hr1G043080.1 | Barley | nucleus | 28.24 | 24.74 |
| CDY66792 | Canola | nucleus | 23.53 | 24.39 |
| TraesCS5B01G248400.1 | Wheat | nucleus | 27.65 | 24.35 |
| CDY42835 | Canola | nucleus | 25.29 | 24.29 |
| CDX78324 | Canola | nucleus | 24.12 | 24.12 |
| Zm00001d020823_P001 | Maize | nucleus | 27.65 | 24.1 |
| EER96905 | Sorghum | nucleus | 25.88 | 23.66 |
| CDY02193 | Canola | nucleus | 25.29 | 23.5 |
| TraesCS7B01G293700.1 | Wheat | nucleus | 22.94 | 23.35 |
| CDY51629 | Canola | nucleus | 25.88 | 23.28 |
| Zm00001d031272_P001 | Maize | nucleus | 27.65 | 23.27 |
| Zm00001d037360_P001 | Maize | nucleus | 27.06 | 23.23 |
| TraesCS7A01G181100.1 | Wheat | nucleus | 29.41 | 23.04 |
| TraesCS5D01G258000.1 | Wheat | nucleus | 25.88 | 22.8 |
| Zm00001d053703_P001 | Maize | nucleus | 23.53 | 22.73 |
| TraesCS7D01G182900.1 | Wheat | nucleus | 28.82 | 22.17 |
| HORVU7Hr1G037230.2 | Barley | nucleus | 28.82 | 22.07 |
| Os08t0487100-01 | Rice | nucleus | 29.41 | 21.74 |
| CDX87188 | Canola | nucleus | 27.65 | 21.56 |
| TraesCS7B01G086100.1 | Wheat | nucleus | 28.24 | 21.52 |
| HORVU6Hr1G034810.1 | Barley | nucleus | 27.06 | 21.5 |
| KXG25724 | Sorghum | nucleus | 28.82 | 21.21 |
| Zm00001d046664_P001 | Maize | nucleus | 22.94 | 20.86 |
| KXG20422 | Sorghum | nucleus | 23.53 | 20.2 |
| CDX70638 | Canola | nucleus | 18.24 | 19.14 |
| CDY16837 | Canola | nucleus | 24.71 | 19.0 |
| TraesCS7A01G391800.1 | Wheat | mitochondrion | 24.71 | 17.36 |
| CDX70640 | Canola | nucleus | 15.88 | 16.98 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | GO:A0A078IDD1 | UniProt:A0A078IDD1 | EnsemblPlants:CDY48072 | ProteinID:CDY48072 |
| ProteinID:CDY48072.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00088744001 | InterPro:IPR004827 |
| PFAM:PF00170 | ScanProsite:PS00036 | PFscan:PS50217 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF133 | SMART:SM00338 |
| SUPFAM:SSF57959 | UniParc:UPI000253F78E | InterPro:bZIP | SEG:seg | : | : |
Description
BnaA06g33560DBnaA06g33560D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IDD1]
Coordinates
chrLK032752:+:52974..53486
Molecular Weight (calculated)
19844.2 Da
IEP (calculated)
6.946
GRAVY (calculated)
-0.892
Length
170 amino acids
Sequence
(BLAST)
(BLAST)
001: MIPAEITGYF QYLSPEDLTM IPAEFNVINM PSSPTSSSSL NYLNDLINNN NYSSSSNGQD LMLSNNSTSD EDYHHNHRQS IIILDERKQR RMLSNRESAR
101: RSRMRKQRHL DELWSQVIRL RNDNNCLIDK LNSVLETQDN VLKENSKLKE EASDLRRLVC DLKSNKYNSF
101: RSRMRKQRHL DELWSQVIRL RNDNNCLIDK LNSVLETQDN VLKENSKLKE EASDLRRLVC DLKSNKYNSF
001: MNTIPAELTG YFHYLPPDKY NNQTPIMESE YFNMPSSPTS CSSFYHLNGL INNNNYSSSS NGQDLMTSNN STSDEDHQQS MVIDERKQRR MISNRESARR
101: SRMRKQRHLD ELWSQVIRLR TDNHCLMDKL NRVSESHELA LKENAKLKEE TSDLRQLISE IKSHNEDDNS FLRELEDSIS NSRSDSNQSG RDFELC
101: SRMRKQRHLD ELWSQVIRLR TDNHCLMDKL NRVSESHELA LKENAKLKEE TSDLRQLISE IKSHNEDDNS FLRELEDSIS NSRSDSNQSG RDFELC
Arabidopsis Description
AtbZIP58BZIP58 [Source:UniProtKB/TrEMBL;Acc:A0A178WP44]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.