Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- vacuole 1
- cytosol 4
- plasma membrane 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG92449 | Soybean | cytosol | 92.62 | 92.0 |
| KRH69070 | Soybean | cytosol | 91.95 | 91.33 |
| KRH34350 | Soybean | cytosol | 91.95 | 91.33 |
| KRH31638 | Soybean | cytosol | 90.6 | 90.0 |
| Solyc06g053930.2.1 | Tomato | cytosol | 87.25 | 87.25 |
| PGSC0003DMT400042062 | Potato | cytosol | 86.58 | 86.0 |
| GSMUA_Achr2P12680_001 | Banana | cytosol | 83.22 | 83.78 |
| AT4G14640.1 | Thale cress | cytosol | 83.89 | 82.78 |
| GSMUA_Achr4P22570_001 | Banana | cytosol | 81.88 | 82.43 |
| GSMUA_Achr7P01390_001 | Banana | cytosol | 81.21 | 81.76 |
| Bra023786.1-P | Field mustard | cytosol | 84.56 | 80.77 |
| CDY34215 | Canola | cytosol | 84.56 | 80.77 |
| GSMUA_Achr1P04700_001 | Banana | cytosol | 79.87 | 80.41 |
| Bra033898.1-P | Field mustard | cytosol | 83.22 | 80.0 |
| CDY10686 | Canola | cytosol | 82.55 | 79.35 |
| Bra001892.1-P | Field mustard | cytosol | 81.88 | 79.22 |
| CDX92965 | Canola | cytosol | 81.88 | 79.22 |
| VIT_17s0000g00580.t01 | Wine grape | cytosol | 79.19 | 79.19 |
| VIT_08s0040g00470.t01 | Wine grape | cytosol | 78.52 | 78.52 |
| GSMUA_Achr1P27230_001 | Banana | cytosol | 77.85 | 78.38 |
| CDY06478 | Canola | cytosol | 79.19 | 78.15 |
| GSMUA_Achr6P24410_001 | Banana | cytosol | 77.85 | 77.85 |
| Bra039723.1-P | Field mustard | cytosol | 79.19 | 77.12 |
| CDX94883 | Canola | cytosol | 57.05 | 76.58 |
| VIT_06s0009g01910.t01 | Wine grape | cytosol | 78.52 | 76.47 |
| PGSC0003DMT400034833 | Potato | cytosol | 78.52 | 76.47 |
| GSMUA_Achr5P09010_001 | Banana | cytosol | 75.17 | 75.68 |
| VIT_00s0179g00280.t01 | Wine grape | cytosol | 74.5 | 74.5 |
| CDY10325 | Canola | cytosol | 56.38 | 74.34 |
| Solyc03g005240.1.1 | Tomato | cytosol | 75.84 | 73.86 |
| VIT_14s0030g02150.t01 | Wine grape | cytosol | 75.17 | 73.2 |
| AT3G22930.1 | Thale cress | cytosol | 83.22 | 71.68 |
| CDY40824 | Canola | cytosol | 84.56 | 70.0 |
| Os03t0743500-02 | Rice | nucleus | 69.8 | 67.53 |
| KXG37587 | Sorghum | cytosol | 67.11 | 64.94 |
| Zm00001d033980_P001 | Maize | cytosol | 54.36 | 51.59 |
| GSMUA_Achr3P25390_001 | Banana | cytosol | 61.07 | 49.73 |
| TraesCS5A01G382800.2 | Wheat | plastid | 61.74 | 49.2 |
| GSMUA_Achr1P14070_001 | Banana | cytosol | 69.8 | 46.02 |
| VIT_02s0012g02060.t01 | Wine grape | cytosol | 46.31 | 42.33 |
| VIT_05s0094g01240.t01 | Wine grape | cytosol | 45.64 | 41.21 |
| VIT_02s0241g00140.t01 | Wine grape | cytosol | 39.6 | 40.14 |
| VIT_16s0039g01880.t01 | Wine grape | cytosol | 42.95 | 39.26 |
| VIT_01s0011g02470.t01 | Wine grape | cytosol | 39.6 | 36.42 |
| VIT_17s0000g04460.t01 | Wine grape | cytosol | 36.91 | 34.38 |
| VIT_07s0031g00700.t01 | Wine grape | cytosol | 45.64 | 33.66 |
| KXG37588 | Sorghum | mitochondrion, nucleus | 1.34 | 1.46 |
Protein Annotations
| Gene3D:1.10.238.10 | EntrezGene:100244152 | wikigene:100244152 | MapMan:35.1 | UniProt:A5BQ65 | EMBL:AM467254 |
| ProteinID:CAN70418 | ProteinID:CAN70418.1 | ProteinID:CBI26332 | ProteinID:CBI26332.3 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS |
| InterPro:EF_hand_dom | EMBL:FN595749 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 | InterPro:IPR002048 |
| EntrezGene:LOC100244152 | wikigene:LOC100244152 | PFAM:PF13499 | ScanProsite:PS00018 | PFscan:PS50222 | PANTHER:PTHR23050 |
| PANTHER:PTHR23050:SF336 | SMART:SM00054 | SUPFAM:SSF47473 | TIGR:TC55344 | UniParc:UPI0001521785 | ArrayExpress:VIT_05s0020g04420 |
| EnsemblPlantsGene:VIT_05s0020g04420 | EnsemblPlants:VIT_05s0020g04420.t01 | unigene:Vvi.10560 | RefSeq:XP_002283755 | RefSeq:XP_002283755.1 | RefSeq:XP_003631997 |
| RefSeq:XP_003631997.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr5:-:6213988..6215333
Molecular Weight (calculated)
16960.9 Da
IEP (calculated)
3.813
GRAVY (calculated)
-0.453
Length
149 amino acids
Sequence
(BLAST)
(BLAST)
001: MADVLSEEQI VEFKEAFCLF DKDGDGCITV EELATVIRSL DQNPTEEELQ DMIREVDADG NGSIEFAEFL NLMAKKVKET DAEEELKEAF KVFDKDQNGY
101: ISATELRHVM INLGEKLTDE EVEQMIREAD LDGDGQVNYD EFVKMMMTA
101: ISATELRHVM INLGEKLTDE EVEQMIREAD LDGDGQVNYD EFVKMMMTA
001: MEEIQQQQQQ QQQQQQQQQQ QQQQQQELTQ EQIMEFKEAF CLFDKDGDGC ITADELATVI RSLDQNPTEQ ELQDMITEID SDGNGTIEFS EFLNLMANQL
101: QETDADEELK EAFKVFDKDQ NGYISASELR HVMINLGEKL TDEEVDQMIK EADLDGDGQV NYDEFVRMMM ING
101: QETDADEELK EAFKVFDKDQ NGYISASELR HVMINLGEKL TDEEVDQMIK EADLDGDGQV NYDEFVRMMM ING
Arabidopsis Description
CML11Calmodulin-like protein 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LIK5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.