Factsheet for VIT_04s0044g00970.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_05s0020g04420.t01
VIT_06s0009g01910.t01
VIT_08s0040g00470.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G77145.1	VIT_06s0009g01910.t01	AT2G41090.1	17360592
AT1G77145.1	VIT_08s0040g00470.t01	AT2G41090.1	17360592
AT1G77145.1	VIT_06s0009g01910.t01	AT2G41100.1	17360592
AT1G77145.1	VIT_08s0040g00470.t01	AT2G41100.1	17360592
AT1G77145.1	VIT_05s0020g04420.t01	AT4G14640.1	17360592
AT1G77145.1	VIT_06s0009g01910.t01	AT5G21274.1	17360592
AT1G77145.1	VIT_08s0040g00470.t01	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH43403	Soybean	cytosol	52.03	53.21
KRH59552	Soybean	cytosol	52.03	51.84
VIT_18s0001g15610.t01	Wine grape	cytosol	52.03	51.09
GSMUA_Achr7P03040_001	Banana	nucleus	45.76	47.88
TraesCS3D01G404300.1	Wheat	nucleus	32.84	36.18
Zm00001d042631_P001	Maize	cytosol	28.04	35.68
TraesCS3B01G442800.1	Wheat	cytosol	31.0	35.0
TraesCS3A01G409700.1	Wheat	cytosol	31.0	34.71
HORVU3Hr1G091440.2	Barley	cytosol	31.0	34.57
OQU87982	Sorghum	cytosol	33.58	32.38
CDX88346	Canola	nucleus	26.94	28.4
Bra015689.1-P	Field mustard	nucleus	26.94	28.4
CDX87538	Canola	nucleus	26.94	28.4
CDX88344	Canola	cytosol	27.31	27.92
Os01t0879600-00	Rice	plastid	31.0	27.81
AT1G77145.1	Thale cress	cytosol	26.57	27.69
CDX88345	Canola	nucleus	26.94	27.24
AT1G77160.1	Thale cress	cytosol	26.2	27.0
Bra015691.1-P	Field mustard	cytosol	26.2	27.0
CDX87540	Canola	cytosol	26.2	27.0
Bra015690.1-P	Field mustard	nucleus	26.57	26.87
CDX87539	Canola	nucleus	26.57	26.87
VIT_13s0019g01100.t01	Wine grape	nucleus	25.46	25.37
VIT_18s0001g06070.t01	Wine grape	nucleus	22.51	22.76
VIT_05s0020g04500.t01	Wine grape	nucleus	28.78	20.21
VIT_00s0337g00040.t01	Wine grape	cytosol	19.93	19.15
VIT_00s0265g00090.t01	Wine grape	mitochondrion	21.4	18.77
VIT_00s0179g00360.t01	Wine grape	cytosol	27.31	18.64
VIT_12s0059g01640.t01	Wine grape	nucleus	20.66	18.6
VIT_12s0028g03560.t01	Wine grape	cytosol	18.82	16.83

Protein Annotations

ArrayExpress:VIT_04s0044g00970	EMBL:FN596506	EnsemblPlants:VIT_04s0044g00970.t01	EnsemblPlantsGene:VIT_04s0044g00970	EntrezGene:100243761	EntrezGene:LOC100243761
InterPro:PDDEXK-like	PANTHER:PTHR31579	PANTHER:PTHR31579:SF10	PFAM:PF04720	ProteinID:CBI37565	ProteinID:CBI37565.3
RefSeq:XP_002275260	RefSeq:XP_002275260.1	SEG:seg	TIGRFAMs:TIGR01615	UniParc:UPI00019832C1	UniProt:D7U4G8
wikigene:100243761	wikigene:LOC100243761	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chr4:+:22259262..22260313

Molecular Weight (calculated)

29978.6 Da

IEP (calculated)

8.368

GRAVY (calculated)

-0.456

Length

271 amino acids

Sequence
(BLAST)

001: MGSLEEEMLV QMVHDFIESE SATPLCSSTS ESLNPEQLQS KYFTLLEVLR SRTDAESGVL EKVVRHMRNK RDADRSNSLK KWFVRRLKMD GFNASLCQTS
101: WPTTLGCSAG DYEYIDVVMK GDKSSGGGGS VRIIVDIDFK SQFGVARPTS AYTQLSEALP SIYVGNEDKL DRIISILSSA AKQSLRERGL HIPPWRTDAY
201: MRAKWLSDCH KVPAPHHAIA FSRENGEAKS SAHGSSKPSK WAPPMVKPKT RDLGGESALS SQFSNLGINC C

Best Arabidopsis Sequence Match ( AT4G14620.1 )
(BLAST)

001: MMKIQPINND LPANRVESST KPVLKSRLKR LLDRPFTRIS NSEKLLISGD GVVAGTEFEP SLAKMVQNYM EENNDKQTKN GRNTHRCNCF NGNNDISDDE
101: LDFFDYDNFK SLIQCGSFVE KSLLVEATKI IEKNKSVKRK DELRKIVVDE LSSLGYDSSI CKSKWDKTRS IPAGEYEYID VIVNGERLII DIDFRSEFEI
201: ARQTSGYKEL LQSLPLIFVG KSDRIRQIVS IVSEASKQSL KKKGMHFPPW RKADYMRAKW LSSYTRNSGE KKPTVTSAAK VVAEPELDSS EIELIFEEKV
301: LLPPLKSPIT SVGRDDDDVA ESVKKEAKVV TGLALLFKEN H

Arabidopsis Description

Uncharacterized protein At4g14620 [Source:UniProtKB/TrEMBL;Acc:Q8L7H9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.