Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G77145.1 | CDX73678 | AT3G51920.1 | 17360592 |
| AT1G77145.1 | CDX95314 | AT3G51920.1 | 17360592 |
| AT1G77145.1 | CDY23174 | AT3G51920.1 | 17360592 |
| AT1G77145.1 | CDY06478 | AT4G14640.1 | 17360592 |
| AT1G77145.1 | CDX92401 | AT5G21274.1 | 17360592 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra015691.1-P | Field mustard | cytosol | 96.96 | 96.96 |
| CDX88344 | Canola | cytosol | 96.2 | 95.47 |
| CDX87539 | Canola | nucleus | 81.37 | 79.85 |
| CDX88345 | Canola | nucleus | 80.23 | 78.73 |
| AT1G77145.1 | Thale cress | cytosol | 68.82 | 69.62 |
| CDX88346 | Canola | nucleus | 66.54 | 68.09 |
| CDX87538 | Canola | nucleus | 65.78 | 67.32 |
| AT1G77160.1 | Thale cress | cytosol | 66.16 | 66.16 |
| PGSC0003DMT400079089 | Potato | cytosol | 20.91 | 36.18 |
| Solyc06g054640.1.1 | Tomato | cytosol | 26.24 | 31.08 |
| KRH59552 | Soybean | cytosol | 28.9 | 27.94 |
| GSMUA_Achr7P03040_001 | Banana | nucleus | 27.38 | 27.8 |
| VIT_18s0001g15610.t01 | Wine grape | cytosol | 28.52 | 27.17 |
| KRH43403 | Soybean | cytosol | 27.38 | 27.17 |
| VIT_04s0044g00970.t01 | Wine grape | cytosol | 27.0 | 26.2 |
| HORVU3Hr1G091440.2 | Barley | cytosol | 23.57 | 25.51 |
| TraesCS3B01G442800.1 | Wheat | cytosol | 23.19 | 25.42 |
| TraesCS3A01G409700.1 | Wheat | cytosol | 23.19 | 25.21 |
| TraesCS3D01G404300.1 | Wheat | nucleus | 23.57 | 25.2 |
| Zm00001d042631_P001 | Maize | cytosol | 19.77 | 24.41 |
| OQU87982 | Sorghum | cytosol | 25.1 | 23.49 |
| CDY60822 | Canola | nucleus | 24.33 | 21.4 |
| Os01t0879600-00 | Rice | plastid | 23.95 | 20.86 |
| CDY34904 | Canola | nucleus | 23.95 | 20.86 |
| CDX92970 | Canola | cytosol | 25.48 | 20.12 |
| CDX93300 | Canola | cytosol | 22.81 | 20.0 |
| CDY35924 | Canola | nucleus | 22.81 | 20.0 |
| CDX94877 | Canola | cytosol | 26.24 | 19.88 |
| CDY18366 | Canola | cytosol | 22.43 | 19.67 |
| CDY28060 | Canola | cytosol, nucleus, plastid | 22.43 | 19.67 |
| CDY21027 | Canola | cytosol | 22.05 | 19.66 |
| CDY52283 | Canola | nucleus | 20.91 | 19.5 |
| CDY31234 | Canola | cytosol | 21.67 | 19.39 |
| CDY29750 | Canola | nucleus, plastid | 25.86 | 19.21 |
| CDY53353 | Canola | mitochondrion | 21.29 | 19.11 |
| CDY15101 | Canola | nucleus | 20.15 | 19.06 |
| CDY30048 | Canola | mitochondrion | 21.29 | 18.98 |
| CDY07696 | Canola | cytosol | 22.43 | 18.91 |
| CDY14428 | Canola | cytosol | 22.05 | 18.65 |
| CDY16266 | Canola | nucleus | 25.1 | 18.49 |
| CDY10330 | Canola | cytosol | 24.71 | 17.76 |
| CDY31947 | Canola | nucleus | 19.77 | 17.51 |
| CDY05782 | Canola | nucleus | 19.77 | 17.51 |
| CDY10329 | Canola | plastid | 25.1 | 17.46 |
| CDY07644 | Canola | cytosol | 19.39 | 16.94 |
| CDX81975 | Canola | nucleus | 19.01 | 16.89 |
| CDY13861 | Canola | nucleus | 18.63 | 16.55 |
| CDY24955 | Canola | cytosol | 18.63 | 16.23 |
| CDY49659 | Canola | nucleus | 18.25 | 16.05 |
| CDY29898 | Canola | nucleus | 17.49 | 15.59 |
| CDY18979 | Canola | nucleus | 17.49 | 15.38 |
| CDX92863 | Canola | nucleus | 17.11 | 15.25 |
Protein Annotations
| EnsemblPlants:CDX87540 | EnsemblPlantsGene:GSBRNA2T00146532001 | InterPro:PDDEXK-like | PANTHER:PTHR31579 | PANTHER:PTHR31579:SF14 | PFAM:PF04720 |
| ProteinID:CDX87540 | ProteinID:CDX87540.1 | SEG:seg | TIGRFAMs:TIGR01615 | UniParc:UPI0004EDDC75 | MapMan:35.2 |
Description
BnaA07g33330D
Coordinates
chrLK031850:+:1115398..1116470
Molecular Weight (calculated)
30047.2 Da
IEP (calculated)
8.420
GRAVY (calculated)
-0.564
Length
263 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSLGKEDLD KLVLDYIEPP VTVHPVTVPP VTVPHHMEKS STALVTLQEI LRTKGEKEKE MEEKVNSFII RRLSYEGDDE KRDVMKKIVS KLRSDGYNDV
101: SIYRTSWDSS FDRREGCSRM FKCKRKYEYI EVMVATGLGG DDRSKMKRLI IDLDFKSQFE LAKQTEGYKD VTQMLPTVFV ATEERLKRVV SLVSGEMTES
201: MKKEGMSRPP WRTTRYMLAK WLPEITVSSS KKGSWSMFDD DGGEAVETTS GIGFKTTCGF KLS
101: SIYRTSWDSS FDRREGCSRM FKCKRKYEYI EVMVATGLGG DDRSKMKRLI IDLDFKSQFE LAKQTEGYKD VTQMLPTVFV ATEERLKRVV SLVSGEMTES
201: MKKEGMSRPP WRTTRYMLAK WLPEITVSSS KKGSWSMFDD DGGEAVETTS GIGFKTTCGF KLS
001: MEEKIRSYIN RGRLSYEGDD EKRDVMNKIV SKLRSEGYNA SLSKTSWDSS FDHREGCRVF TCSRKYEYID AMVIGDSDRD GVSKLKRVII DLDFKTQFEL
101: ARQTEAYKDM TEMLPTVFVA TEGRLRRVVS LVCGEMKKSM KKEGMSRPPW RTSRYMQSKW LPENCRRDAG CKKGSWSWSV FDDGGEGIGE ARSWTVSGPK
201: TKCCFPIF
101: ARQTEAYKDM TEMLPTVFVA TEGRLRRVVS LVCGEMKKSM KKEGMSRPPW RTSRYMQSKW LPENCRRDAG CKKGSWSWSV FDDGGEGIGE ARSWTVSGPK
201: TKCCFPIF
Arabidopsis Description
Putative uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q45GL9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.