Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra026262.1-P | Field mustard | nucleus | 99.67 | 99.67 |
| CDY18979 | Canola | nucleus | 97.66 | 97.66 |
| CDY29898 | Canola | nucleus | 83.95 | 85.08 |
| CDX92863 | Canola | nucleus | 83.95 | 85.08 |
| AT4G32480.1 | Thale cress | nucleus | 76.92 | 80.14 |
| CDY31947 | Canola | nucleus | 69.9 | 70.37 |
| CDY05782 | Canola | nucleus | 69.9 | 70.37 |
| CDX81975 | Canola | nucleus | 69.23 | 69.93 |
| CDY13861 | Canola | nucleus | 67.89 | 68.58 |
| VIT_12s0028g03560.t01 | Wine grape | cytosol | 50.84 | 50.16 |
| KRH25597 | Soybean | nucleus | 44.15 | 45.99 |
| GSMUA_Achr3P31780_001 | Banana | cytosol | 42.81 | 44.6 |
| PGSC0003DMT400047228 | Potato | nucleus | 42.14 | 44.37 |
| GSMUA_Achr7P24960_001 | Banana | cytosol | 39.8 | 43.43 |
| HORVU3Hr1G071220.1 | Barley | nucleus | 37.79 | 43.13 |
| GSMUA_Achr4P02600_001 | Banana | nucleus | 39.13 | 42.09 |
| EES01469 | Sorghum | nucleus | 39.46 | 41.84 |
| Zm00001d043444_P001 | Maize | nucleus | 39.46 | 41.55 |
| TraesCS3D01G273300.1 | Wheat | nucleus | 38.13 | 41.16 |
| TraesCS3A01G274100.1 | Wheat | nucleus | 38.13 | 40.86 |
| Solyc07g053900.2.1 | Tomato | cytosol | 43.48 | 40.62 |
| TraesCS3B01G307800.1 | Wheat | nucleus | 37.79 | 40.5 |
| HORVU1Hr1G076120.1 | Barley | nucleus | 34.78 | 37.01 |
| TraesCS1D01G341700.1 | Wheat | cytosol | 35.79 | 36.9 |
| TraesCS1B01G352000.1 | Wheat | nucleus | 35.12 | 36.71 |
| TraesCS1A01G339700.1 | Wheat | cytosol | 35.45 | 36.43 |
| EES19824 | Sorghum | cytosol | 35.45 | 35.22 |
| Os05t0519300-01 | Rice | cytosol | 35.45 | 34.64 |
| CDY52283 | Canola | nucleus | 21.4 | 22.7 |
| CDY15101 | Canola | nucleus | 20.74 | 22.3 |
| CDY24955 | Canola | cytosol | 20.4 | 20.2 |
| CDY07644 | Canola | cytosol | 20.07 | 19.93 |
| CDX88346 | Canola | nucleus | 17.06 | 19.84 |
| CDY30048 | Canola | mitochondrion | 19.4 | 19.66 |
| CDX87538 | Canola | nucleus | 16.72 | 19.46 |
| CDY53353 | Canola | mitochondrion | 19.06 | 19.45 |
| CDY31234 | Canola | cytosol | 19.06 | 19.39 |
| CDY21027 | Canola | cytosol | 19.06 | 19.32 |
| CDX88345 | Canola | nucleus | 17.06 | 19.03 |
| CDY60822 | Canola | nucleus | 18.73 | 18.73 |
| CDY35924 | Canola | nucleus | 18.73 | 18.67 |
| CDX87539 | Canola | nucleus | 16.72 | 18.66 |
| CDY07696 | Canola | cytosol | 19.4 | 18.59 |
| CDY34904 | Canola | nucleus | 18.73 | 18.54 |
| CDX88344 | Canola | cytosol | 16.39 | 18.49 |
| CDY29750 | Canola | nucleus, plastid | 21.74 | 18.36 |
| CDY28060 | Canola | cytosol, nucleus, plastid | 18.39 | 18.33 |
| CDY18366 | Canola | cytosol | 18.39 | 18.33 |
| CDX93300 | Canola | cytosol | 18.39 | 18.33 |
| CDY14428 | Canola | cytosol | 19.06 | 18.33 |
| CDX92970 | Canola | cytosol | 20.4 | 18.32 |
| CDX87540 | Canola | cytosol | 16.05 | 18.25 |
| CDY16266 | Canola | nucleus | 21.07 | 17.65 |
| CDX94877 | Canola | cytosol | 20.07 | 17.29 |
| CDY10330 | Canola | cytosol | 19.4 | 15.85 |
| CDY10329 | Canola | plastid | 19.06 | 15.08 |
Protein Annotations
| EnsemblPlants:CDY49659 | EnsemblPlantsGene:GSBRNA2T00093534001 | InterPro:PDDEXK-like | PANTHER:PTHR31579 | PANTHER:PTHR31579:SF33 | PFAM:PF04720 |
| ProteinID:CDY49659 | ProteinID:CDY49659.1 | SEG:seg | TIGRFAMs:TIGR01615 | UniParc:UPI0004EE6151 | UniProt:A0A078IJS9 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaC09g41370DBnaC09g41370D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IJS9]
Coordinates
chrLK032850:+:100042..101257
Molecular Weight (calculated)
33726.4 Da
IEP (calculated)
7.638
GRAVY (calculated)
-0.558
Length
299 amino acids
Sequence
(BLAST)
(BLAST)
001: MDRQDSDDIM KFLDGMASSD DVLFGFLDGG NHSPEVYPDT GSFAAGEDSD AENDAAGCNS EENKTFWLEQ EQLLQATLYR TSSIETKIRQ AAKQALKEVR
101: SEGTQCVCRK PVPGGCRSCL RGEVARRLRE AGYDCVRCKS KWRSNHEIPA GEHEYLEIVD QSGSKKVEIR VVIELSFRAE FEMARGSEEY KRVVGILPEV
201: YVGKTERLRT LIKILCMAAK KCMKDKKMHM GPWRKHKYMQ AKWLGTCERK SMRLVAETKT ETEEEDIIAK AKQRVSMLNY GIFENVSAGM GRPAAVAVV
101: SEGTQCVCRK PVPGGCRSCL RGEVARRLRE AGYDCVRCKS KWRSNHEIPA GEHEYLEIVD QSGSKKVEIR VVIELSFRAE FEMARGSEEY KRVVGILPEV
201: YVGKTERLRT LIKILCMAAK KCMKDKKMHM GPWRKHKYMQ AKWLGTCERK SMRLVAETKT ETEEEDIIAK AKQRVSMLNY GIFENVSAGM GRPAAVAVV
001: MDRQSSDDIM KFLDGMASSD DVLFGFLDEG NHSPEDYNFA AGDESEVDND TTDCNSEENR KFWQEHEQLL QATLYRTSSI ETKIRQATKE ALKVVRSKGL
101: VCVCRRPVTD GCRSCLRGEV SSLLREAGYD CVISKSKWRS SHEIPAGEHE YLEVVDKSVS KKGEIRVVIE LCFRAEFEMA RGSEEYKRLI GMLPEVYVGK
201: TERLKSLIKI LCTAAKKCMK DKKMHMGPWR KHKYMQAKWF GTCERKSVSP VSETEENMFP VAKQRVSMLN YGLFGAGIGR PTVVAVV
101: VCVCRRPVTD GCRSCLRGEV SSLLREAGYD CVISKSKWRS SHEIPAGEHE YLEVVDKSVS KKGEIRVVIE LCFRAEFEMA RGSEEYKRLI GMLPEVYVGK
201: TERLKSLIKI LCTAAKKCMK DKKMHMGPWR KHKYMQAKWF GTCERKSVSP VSETEENMFP VAKQRVSMLN YGLFGAGIGR PTVVAVV
Arabidopsis Description
AT4g32480/F8B4_180 [Source:UniProtKB/TrEMBL;Acc:Q9SUU4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.