Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY18366 | Canola | cytosol | 97.0 | 97.0 |
| CDY14428 | Canola | cytosol | 77.33 | 74.6 |
| CDY07696 | Canola | cytosol | 76.33 | 73.4 |
| AT2G38820.2 | Thale cress | cytosol | 75.33 | 72.9 |
| KRH71351 | Soybean | cytosol | 55.67 | 46.52 |
| VIT_00s0179g00360.t01 | Wine grape | cytosol | 61.0 | 46.1 |
| KRH32089 | Soybean | cytosol | 50.33 | 44.54 |
| GSMUA_Achr4P14880_001 | Banana | mitochondrion | 38.67 | 43.94 |
| GSMUA_Achr3P15230_001 | Banana | cytosol | 49.0 | 43.62 |
| CDX92970 | Canola | cytosol | 48.33 | 43.54 |
| KRG95606 | Soybean | cytosol | 52.0 | 43.21 |
| CDX94877 | Canola | cytosol | 49.67 | 42.94 |
| CDY10330 | Canola | cytosol | 50.0 | 40.98 |
| GSMUA_Achr8P20590_001 | Banana | plastid | 48.33 | 39.94 |
| GSMUA_Achr8P26930_001 | Banana | cytosol | 47.0 | 39.94 |
| GSMUA_Achr4P21100_001 | Banana | cytosol, plastid | 47.67 | 39.83 |
| CDY10329 | Canola | plastid | 49.67 | 39.42 |
| CDY29750 | Canola | nucleus, plastid | 46.33 | 39.27 |
| CDY16266 | Canola | nucleus | 46.67 | 39.22 |
| GSMUA_Achr8P04470_001 | Banana | cytosol | 48.0 | 39.13 |
| PGSC0003DMT400049773 | Potato | nucleus | 53.67 | 37.1 |
| GSMUA_Achr9P10660_001 | Banana | cytosol, plastid | 47.0 | 36.91 |
| Solyc09g065760.2.1 | Tomato | cytosol, plastid | 53.33 | 36.78 |
| Os03t0162500-01 | Rice | plastid | 37.33 | 36.48 |
| EER91615 | Sorghum | mitochondrion | 35.33 | 36.18 |
| EER95459 | Sorghum | plastid | 36.0 | 36.12 |
| TraesCS4D01G277000.1 | Wheat | peroxisome, plastid | 37.0 | 35.69 |
| Zm00001d032955_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 35.67 | 35.67 |
| Zm00001d027763_P001 | Maize | plastid | 35.67 | 35.67 |
| TraesCS4A01G025500.1 | Wheat | peroxisome, plastid | 37.33 | 35.56 |
| TraesCS4B01G278500.1 | Wheat | peroxisome, plastid | 36.67 | 35.37 |
| Os10t0417800-01 | Rice | plastid | 35.33 | 35.22 |
| HORVU4Hr1G073730.1 | Barley | peroxisome, plastid | 36.67 | 34.92 |
| GSMUA_Achr9P25590_001 | Banana | plastid | 47.0 | 34.64 |
| TraesCS5B01G442200.1 | Wheat | plastid | 39.0 | 31.2 |
| TraesCS5A01G439200.1 | Wheat | plastid | 38.0 | 30.4 |
| TraesCS5D01G446400.1 | Wheat | plastid | 38.0 | 29.92 |
| Os03t0796600-01 | Rice | cytosol, nucleus, plastid | 39.33 | 29.14 |
| EER93295 | Sorghum | plastid | 37.33 | 28.5 |
| Zm00001d018962_P001 | Maize | mitochondrion, plastid | 36.33 | 28.46 |
| HORVU5Hr1G105950.2 | Barley | plastid | 37.67 | 27.76 |
| Zm00001d034444_P002 | Maize | plastid | 37.0 | 27.41 |
| CDY60822 | Canola | nucleus | 27.0 | 27.09 |
| Zm00001d007820_P002 | Maize | plastid | 36.0 | 26.93 |
| CDY34904 | Canola | nucleus | 27.0 | 26.82 |
| CDY07644 | Canola | cytosol | 25.33 | 25.25 |
| CDY35924 | Canola | nucleus | 25.0 | 25.0 |
| CDY24955 | Canola | cytosol | 25.0 | 24.83 |
| CDY15101 | Canola | nucleus | 23.0 | 24.82 |
| CDY52283 | Canola | nucleus | 23.0 | 24.47 |
| CDY30048 | Canola | mitochondrion | 24.0 | 24.41 |
| CDY28060 | Canola | cytosol, nucleus, plastid | 24.33 | 24.33 |
| CDY53353 | Canola | mitochondrion | 23.33 | 23.89 |
| CDX88346 | Canola | nucleus | 20.33 | 23.74 |
| EER98072 | Sorghum | cytosol, plastid | 36.67 | 23.21 |
| CDX88344 | Canola | cytosol | 20.33 | 23.02 |
| CDX87538 | Canola | nucleus | 19.67 | 22.96 |
| CDX87540 | Canola | cytosol | 20.0 | 22.81 |
| CDX87539 | Canola | nucleus | 20.33 | 22.76 |
| CDY21027 | Canola | cytosol | 22.33 | 22.71 |
| CDX88345 | Canola | nucleus | 20.0 | 22.39 |
| CDY31234 | Canola | cytosol | 21.67 | 22.11 |
| CDX81975 | Canola | nucleus | 18.33 | 18.58 |
| CDY13861 | Canola | nucleus | 18.33 | 18.58 |
| CDY49659 | Canola | nucleus | 18.33 | 18.39 |
| CDX92863 | Canola | nucleus | 18.0 | 18.31 |
| CDY29898 | Canola | nucleus | 18.0 | 18.31 |
| CDY05782 | Canola | nucleus | 18.0 | 18.18 |
| CDY31947 | Canola | nucleus | 18.0 | 18.18 |
| CDY18979 | Canola | nucleus | 18.0 | 18.06 |
Protein Annotations
| EnsemblPlants:CDX93300 | EnsemblPlantsGene:GSBRNA2T00155272001 | InterPro:PDDEXK-like | PANTHER:PTHR31579 | PANTHER:PTHR31579:SF5 | PFAM:PF04720 |
| ProteinID:CDX93300 | ProteinID:CDX93300.1 | SEG:seg | TIGRFAMs:TIGR01615 | UniParc:UPI0004EE9C44 | MapMan:35.2 |
Description
BnaC04g45960D
Coordinates
chrLK031875:-:838333..839306
Molecular Weight (calculated)
33658.5 Da
IEP (calculated)
8.395
GRAVY (calculated)
-0.393
Length
300 amino acids
Sequence
(BLAST)
(BLAST)
001: MPFHTKIQPI DLSEDLPTMK QMPKSRLKRL FERQFSIKNA TVGEFDAPPL SRGNSGDFEP SSVCLAKMVV NFIEDNKEEE EKQRCGRSGC SCFTGSGTES
101: SGDESEWSDD AKCSSGEACV RLKSLVLCTS ISERNVMADV TKIVETSKRK DQSCLKNLVS VLVRLGYDAA ICKSRWEKTP SYPTGEYEYV DVIMEGERLL
201: IDIDFKSNFE IARATKTYKS ILQTIPCIFV GKADRLQRII MLLSKAAKQS LKKKGLHVPP WRRAEYVKSK WLSTYVRGEE KQETVDMLSA SVGGSIVFGV
101: SGDESEWSDD AKCSSGEACV RLKSLVLCTS ISERNVMADV TKIVETSKRK DQSCLKNLVS VLVRLGYDAA ICKSRWEKTP SYPTGEYEYV DVIMEGERLL
201: IDIDFKSNFE IARATKTYKS ILQTIPCIFV GKADRLQRII MLLSKAAKQS LKKKGLHVPP WRRAEYVKSK WLSTYVRGEE KQETVDMLSA SVGGSIVFGV
001: MPLHMKIQPI DESDVSEEVP YPETMRQMPK SRLKRLFERQ FTNKNVSEKF TGSDVEAPLS RGNSGDFEPS SVCLAKMVLN FMEDNNGGEK QRCGRSRCNC
101: FSGSGTESSD DETECSSGEA CEILKSLVLC KSIRVRNLLT DVTKIAETSK NCKLKDGSCL KSVANGLVSL GYDAALCKSR WEKSPSCPAG EYEYVDVIMK
201: GERLLIDIDF KSKFEIARAT KTYKSMLQTL PYIFVGKADR LQKIIVLICK AAKQSLKKKG LHVPPWRRAE YVKSKWLSSH VRVDQNSNGE VKQESVEVIA
301: ESVSSIVFGV
101: FSGSGTESSD DETECSSGEA CEILKSLVLC KSIRVRNLLT DVTKIAETSK NCKLKDGSCL KSVANGLVSL GYDAALCKSR WEKSPSCPAG EYEYVDVIMK
201: GERLLIDIDF KSKFEIARAT KTYKSMLQTL PYIFVGKADR LQKIIVLICK AAKQSLKKKG LHVPPWRRAE YVKSKWLSSH VRVDQNSNGE VKQESVEVIA
301: ESVSSIVFGV
Arabidopsis Description
Protein of unknown function (DUF506) [Source:TAIR;Acc:AT2G38820]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.