Factsheet for Os03t0162500-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 1
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os05t0408900-03

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G22970.1	Os05t0408900-03	AT4G15560.1	24104567

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d027763_P001	Maize	plastid	81.11	83.0
EER95459	Sorghum	plastid	80.78	82.94
TraesCS4D01G277000.1	Wheat	peroxisome, plastid	81.11	80.06
TraesCS4B01G278500.1	Wheat	peroxisome, plastid	81.11	80.06
HORVU4Hr1G073730.1	Barley	peroxisome, plastid	80.78	78.73
TraesCS4A01G025500.1	Wheat	peroxisome, plastid	80.78	78.73
Os10t0417800-01	Rice	plastid	71.99	73.42
GSMUA_Achr4P21100_001	Banana	cytosol, plastid	52.12	44.57
GSMUA_Achr9P10660_001	Banana	cytosol, plastid	54.4	43.72
GSMUA_Achr8P20590_001	Banana	plastid	51.47	43.53
AT2G38820.2	Thale cress	cytosol	39.09	38.71
GSMUA_Achr9P25590_001	Banana	plastid	51.14	38.57
Bra000098.1-P	Field mustard	cytosol	37.78	37.54
CDY07696	Canola	cytosol	38.11	37.5
CDX93300	Canola	cytosol	36.48	37.33
CDY14428	Canola	cytosol	37.78	37.3
Os03t0796600-01	Rice	cytosol, nucleus, plastid	49.19	37.28
CDY18366	Canola	cytosol	36.16	37.0
Bra017099.1-P	Field mustard	cytosol	36.16	37.0
KRH71351	Soybean	cytosol	42.67	36.49
Bra036877.1-P	Field mustard	cytosol, plastid	41.37	35.88
AT3G54550.1	Thale cress	plastid	33.55	35.76
Bra001897.1-P	Field mustard	cytosol	38.76	35.74
CDX92970	Canola	cytosol	38.76	35.74
KRG95606	Soybean	cytosol	42.02	35.73
CDY29750	Canola	nucleus, plastid	41.04	35.59
KRH32089	Soybean	cytosol	38.76	35.1
Bra033896.1-P	Field mustard	cytosol	41.69	34.88
CDY16266	Canola	nucleus	40.39	34.73
VIT_00s0179g00360.t01	Wine grape	cytosol	44.3	34.26
VIT_05s0020g04500.t01	Wine grape	nucleus	43.0	34.2
PGSC0003DMT400041951	Potato	cytosol	40.39	33.51
CDX94877	Canola	cytosol	37.78	33.43
CDY10330	Canola	cytosol	39.74	33.33
KRG92439	Soybean	plastid	42.67	33.33
PGSC0003DMT400015576	Potato	cytosol, plastid	42.67	33.08
KRH34359	Soybean	plastid	41.69	33.07
CDY10329	Canola	plastid	39.74	32.28
Os01t0915000-01	Rice	cytosol	30.62	32.08
Solyc06g053910.2.1	Tomato	cytosol, plastid	40.39	31.88
KRH69065	Soybean	cytosol	37.78	31.69
Solyc09g082980.2.1	Tomato	nucleus	41.04	31.66
AT3G22970.1	Thale cress	plastid	38.11	31.62
KRH31637	Soybean	cytosol	39.41	31.59
AT4G14620.1	Thale cress	cytosol	34.85	31.38
Os11t0437600-01	Rice	plastid	29.97	30.07
PGSC0003DMT400049773	Potato	nucleus	39.74	28.11
Solyc09g065760.2.1	Tomato	cytosol, plastid	38.76	27.36
Os05t0519300-01	Rice	cytosol	25.08	25.16
Os01t0879600-00	Rice	plastid	23.13	23.51
Os01t0973600-01	Rice	plastid	25.08	22.85
Os02t0720400-00	Rice	nucleus	22.8	21.15

Protein Annotations

EMBL:AK064886	EnsemblPlants:Os03t0162500-01	EnsemblPlantsGene:Os03g0162500	EntrezGene:4331713	InterPro:PDDEXK-like	PANTHER:PTHR31579
PANTHER:PTHR31579:SF16	PFAM:PF04720	ProteinID:AAN06859.1	ProteinID:ABF94122.1	ProteinID:BAF10966.1	ProteinID:BAS82430.1
ProteinID:EAZ25681.1	RefSeq:XP_015628737.1	SEG:seg	TIGRFAMs:TIGR01615	UniParc:UPI00000AD268	UniProt:Q8H7Y9
MapMan:35.2	:	:	:	:	:

Description

Protein of unknown function DUF506, plant family protein. (Os03t0162500-01)

Coordinates

chr3:+:3380200..3381695

Molecular Weight (calculated)

33012.9 Da

IEP (calculated)

7.155

GRAVY (calculated)

-0.416

Length

307 amino acids

Sequence
(BLAST)

001: MRAAAAAAGQ IDPSPGAPAK SRLKRLFERQ LLRVSPAERL PSVAGVGEKD ESSEPSSVCL DGMVRSFLED GVGVERPAGA ARCCNCFHGG EASDDDDDGP
101: AAAEAAATSD AAETIKGLVH CASLRERNLL ADVSTLVERH RAAGARKRDL LRLLADSLRA AGHDAAVCIS RWDKSSSHPK GEHAYLDVLL PPASDRAERE
201: RILVDVDFRS EFEVARPTKA YRAVLQRLPS VFVGKEDRLR LLVAAAADAA RASLKKRGLH LPPWRKPEYM RAKWLSPYER DVPSPQQPDA SAGELAVDGE
301: GGGAWTQ

Best Arabidopsis Sequence Match ( AT2G38820.2 )
(BLAST)

001: MPLHMKIQPI DESDVSEEVP YPETMRQMPK SRLKRLFERQ FTNKNVSEKF TGSDVEAPLS RGNSGDFEPS SVCLAKMVLN FMEDNNGGEK QRCGRSRCNC
101: FSGSGTESSD DETECSSGEA CEILKSLVLC KSIRVRNLLT DVTKIAETSK NCKLKDGSCL KSVANGLVSL GYDAALCKSR WEKSPSCPAG EYEYVDVIMK
201: GERLLIDIDF KSKFEIARAT KTYKSMLQTL PYIFVGKADR LQKIIVLICK AAKQSLKKKG LHVPPWRRAE YVKSKWLSSH VRVDQNSNGE VKQESVEVIA
301: ESVSSIVFGV

Arabidopsis Description

Protein of unknown function (DUF506) [Source:TAIR;Acc:AT2G38820]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.