Factsheet for Os11t0437600-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 2
plasma membrane 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0675000-01
Os01t0760300-01
Os02t0656300-01
Os05t0560100-01
Os06t0679100-00

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G07350.1	Os01t0675000-01	AT1G52240.1	21798944
AT3G07350.1	Os01t0760300-01	AT1G52240.1	21798944
AT3G07350.1	Os05t0560100-01	AT1G52240.1	21798944
AT3G07350.1	Os02t0656300-01	AT3G48150.1	21798944
AT3G07350.1	Os06t0679100-00	AT3G48150.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G188800.1	Wheat	mitochondrion	61.76	63.21
HORVU4Hr1G054810.1	Barley	mitochondrion	59.15	61.77
TraesCS4B01G187500.1	Wheat	mitochondrion	59.8	61.2
TraesCS4A01G116900.1	Wheat	plastid	61.76	57.98
GSMUA_Achr6P21070_001	Banana	cytosol	46.08	47.32
Os01t0915000-01	Rice	cytosol	39.87	41.64
Bra040373.1-P	Field mustard	plastid	23.86	38.02
AT3G07350.1	Thale cress	nucleus	33.99	34.9
CDY60822	Canola	nucleus	33.99	34.78
Bra029641.1-P	Field mustard	nucleus	33.99	34.67
CDY35924	Canola	nucleus	33.99	34.67
CDY34904	Canola	nucleus	33.66	34.11
CDY28060	Canola	cytosol, nucleus, plastid	33.01	33.67
Solyc06g007580.1.1	Tomato	nucleus	32.68	33.44
PGSC0003DMT400053173	Potato	nucleus	32.35	33.11
AT3G25240.1	Thale cress	cytosol	30.39	33.1
VIT_00s0337g00040.t01	Wine grape	cytosol	29.09	31.56
KRH07392	Soybean	nucleus	30.72	31.44
Solyc06g083160.1.1	Tomato	nucleus	29.74	31.06
Bra013223.1-P	Field mustard	nucleus	28.43	30.85
CDY52283	Canola	nucleus	28.43	30.85
KRH46613	Soybean	mitochondrion, nucleus	28.1	30.18
Os03t0162500-01	Rice	plastid	30.07	29.97
CDY15101	Canola	nucleus	27.12	29.86
PGSC0003DMT400051812	Potato	nucleus	28.43	29.29
Os02t0720400-00	Rice	nucleus	30.07	27.79
Os10t0417800-01	Rice	plastid	26.47	26.91
PGSC0003DMT400008686	Potato	cytosol	22.88	25.55
Solyc09g057760.2.1	Tomato	nucleus	16.01	22.69
Os05t0519300-01	Rice	cytosol	22.55	22.55
Os03t0796600-01	Rice	cytosol, nucleus, plastid	29.41	22.22
Os01t0879600-00	Rice	plastid	20.59	20.86
Os01t0973600-01	Rice	plastid	20.26	18.4

Protein Annotations

EMBL:AK241582	EnsemblPlants:Os11t0437600-01	EnsemblPlantsGene:Os11g0437600	EntrezGene:9271655	InterPro:PDDEXK-like	PANTHER:PTHR31579
PANTHER:PTHR31579:SF9	PFAM:PF04720	ProteinID:ABA93251.2	ProteinID:BAH95246.1	ProteinID:BAT13853.1	RefSeq:XP_015616684.1
SEG:seg	TIGRFAMs:TIGR01615	UniParc:UPI0000D89AA6	UniProt:Q2R5G9	MapMan:35.2	:

Description

Protein of unknown function DUF506, plant family protein. (Os11t0437600-01)

Coordinates

chr11:+:14267738..14268964

Molecular Weight (calculated)

32466.3 Da

IEP (calculated)

5.507

GRAVY (calculated)

-0.176

Length

306 amino acids

Sequence
(BLAST)

001: MTTPCASSRA KRATAPLDAA AMARLAVVPG SADSSGSEHE AALSSLVNEY LLEAADDATV PSAAVLAVGG GSDAEEDDEH EGGVGAAEEV DEIARVLDAA
101: GGGDGDDLRR RIFADVVDSM RELENVRAQR SAFRRAVMSL LRERGHDAGL CKARWNKTSS MVAGSYEYID VVVAAAPDAA EATRYIVDVG FAGEFEVARP
201: TEDYEAVRSA LPEVLVARPD DVRKVVRAAA SAARRSLKRR RLSVPPWRKR KFMIAKWLGP YRRTVNAVPT SAGTAIDGGS SLAVCRTVHG FEAPPLVMTT
301: PTGLWG

Best Arabidopsis Sequence Match ( AT3G07350.1 )
(BLAST)

001: MGFSRAKRVT DPLAEEVRAR LVGCSFSSGS EHTGDGIEDY EDDDSPCLSD LVQGFLEDEV DTVDDESCWC DQDSGSDSDS DSELGELPDF ADDIAKLLRN
101: SLREDSYGRT VLVHVARAME MLSSLGSQPE QRAVFQRKVM SLLRELGHNA AICKTKWKSS GGLTAGNHEF IDVVYTPSAS SQSVRFIVDL DFSSRFQIAR
201: PTSQYARVLQ SLPAVFVGKG DDLKRILRLV CDAARISLRN RGLTLPPWRK NRYMQTRWLG PYKRTTNLTP STSGVDTVMC RAIGFDNAVG GRLFVRTR

Arabidopsis Description

F21O3.6 protein [Source:UniProtKB/TrEMBL;Acc:Q9SRT1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.