Skip to main content
crop-pal logo
Rice
Search for another protein from :
Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • plastid 4
  • extracellular 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, extracellular, mitochondrion, nucleus, plastid
BaCelLo:nucleus
EpiLoc:cytosol
iPSORT:plastid
MultiLoc:extracellular
Plant-mPloc:nucleus, plastid
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:plastid
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
Os01t0267900-01
Os01t0279300-01
Os01t0810300-01
Os03t0319300-01
Os03t0743500-02
Os05t0491000-01
Os05t0491100-01
Os07t0687200-02
Os12t0603800-00

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G77145.1 Os01t0267900-01 AT2G41090.1 17360592
AT1G77145.1 Os01t0279300-01 AT2G41090.1 17360592
AT1G77145.1 Os01t0810300-01 AT2G41090.1 17360592
AT1G77145.1 Os03t0319300-01 AT2G41090.1 17360592
AT1G77145.1 Os05t0491000-01 AT2G41090.1 17360592
AT1G77145.1 Os05t0491100-01 AT2G41090.1 17360592
AT1G77145.1 Os07t0687200-02 AT2G41090.1 17360592
AT1G77145.1 Os12t0603800-00 AT2G41090.1 17360592
AT1G77145.1 Os01t0267900-01 AT2G41100.1 17360592
AT1G77145.1 Os01t0279300-01 AT2G41100.1 17360592
AT1G77145.1 Os01t0810300-01 AT2G41100.1 17360592
AT1G77145.1 Os03t0319300-01 AT2G41100.1 17360592
AT1G77145.1 Os05t0491000-01 AT2G41100.1 17360592
AT1G77145.1 Os05t0491100-01 AT2G41100.1 17360592
AT1G77145.1 Os07t0687200-02 AT2G41100.1 17360592
AT1G77145.1 Os12t0603800-00 AT2G41100.1 17360592
AT1G77145.1 Os03t0743500-02 AT4G14640.1 17360592
AT1G77145.1 Os01t0267900-01 AT5G21274.1 17360592
AT1G77145.1 Os01t0279300-01 AT5G21274.1 17360592
AT1G77145.1 Os01t0810300-01 AT5G21274.1 17360592
AT1G77145.1 Os03t0319300-01 AT5G21274.1 17360592
AT1G77145.1 Os05t0491000-01 AT5G21274.1 17360592
AT1G77145.1 Os05t0491100-01 AT5G21274.1 17360592
AT1G77145.1 Os07t0687200-02 AT5G21274.1 17360592
AT1G77145.1 Os12t0603800-00 AT5G21274.1 17360592
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3A01G409700.1 Wheat cytosol 55.3 69.01
TraesCS3D01G404300.1 Wheat nucleus 55.96 68.7
TraesCS3B01G442800.1 Wheat cytosol 53.97 67.92
HORVU3Hr1G091440.2 Barley cytosol 52.98 65.84
Zm00001d042631_P001 Maize cytosol 45.36 64.32
OQU87982 Sorghum cytosol 53.64 57.65
GSMUA_Achr7P03040_001 Banana nucleus 43.38 50.58
PGSC0003DMT400079089 Potato cytosol 22.19 44.08
Solyc06g054640.1.1 Tomato cytosol 25.5 34.68
KRH43403 Soybean cytosol 29.47 33.58
KRH59552 Soybean cytosol 30.13 33.46
VIT_18s0001g15610.t01 Wine grape cytosol 28.81 31.52
VIT_04s0044g00970.t01 Wine grape cytosol 27.81 31.0
CDX87538 Canola nucleus 22.52 26.46
Bra015689.1-P Field mustard nucleus 22.52 26.46
CDX88346 Canola nucleus 22.19 26.07
AT1G77145.1 Thale cress cytosol 22.19 25.77
CDX87539 Canola nucleus 22.19 25.0
Bra015690.1-P Field mustard nucleus 22.19 25.0
CDX88344 Canola cytosol 21.52 24.53
Bra015691.1-P Field mustard cytosol 21.19 24.33
Os10t0417800-01 Rice plastid 24.17 24.25
CDX87540 Canola cytosol 20.86 23.95
AT1G77160.1 Thale cress cytosol 20.53 23.57
CDX88345 Canola nucleus 20.86 23.51
Os03t0162500-01 Rice plastid 23.51 23.13
Os01t0915000-01 Rice cytosol 20.86 21.5
Os02t0720400-00 Rice nucleus 23.18 21.15
Os01t0973600-01 Rice plastid 23.51 21.07
Os11t0437600-01 Rice plastid 20.86 20.59
Os05t0519300-01 Rice cytosol 20.86 20.59
Os03t0796600-01 Rice cytosol, nucleus, plastid 27.15 20.25
Protein Annotations
EnsemblPlants:Os01t0879600-00EnsemblPlantsGene:Os01g0879600InterPro:PDDEXK-likePANTHER:PTHR31579PANTHER:PTHR31579:SF14PFAM:PF04720
ProteinID:BAS75542.1SEG:segTIGRFAMs:TIGR01615UniParc:UPI000393A4FAUniProt:A0A0P0VB70MapMan:35.2
Description
Protein of unknown function DUF506, plant domain containing protein. (Os01t0879600-00)
Coordinates
chr1:+:38164170..38165993
Molecular Weight (calculated)
33486.1 Da
IEP (calculated)
8.945
GRAVY (calculated)
-0.490
Length
302 amino acids
Sequence
(BLAST)
001: MRKPPWLHCS LIICPPLETS RTLCTSSLRL HPKITRSEDH IDITMSSSEE RMFEMDADPT SSPEASPKHH HSTCHILEQG LLGRCTQVEM EIQERAMKHV
101: MEIGEERKRS SLKRRLMMRL RKDGYDASLC RSSWVATAEH PGGDYEYIDV LVAVGHGADT SSTSRLIVDV DFRSQFQLAR PAPWYAHLSS RLPPVFVGPP
201: EKLRQAVALL CMAAQRSLRE SGLHVPPWRR PSYVQAKWLP CRGVQASALP PGGESAAAAN GGDGPRAVVQ WSVGKERRRR GGGHRRSGLS VELSDSGAGE
301: VS
Best Arabidopsis Sequence Match ( AT2G38820.2 )
(BLAST)
001: MPLHMKIQPI DESDVSEEVP YPETMRQMPK SRLKRLFERQ FTNKNVSEKF TGSDVEAPLS RGNSGDFEPS SVCLAKMVLN FMEDNNGGEK QRCGRSRCNC
101: FSGSGTESSD DETECSSGEA CEILKSLVLC KSIRVRNLLT DVTKIAETSK NCKLKDGSCL KSVANGLVSL GYDAALCKSR WEKSPSCPAG EYEYVDVIMK
201: GERLLIDIDF KSKFEIARAT KTYKSMLQTL PYIFVGKADR LQKIIVLICK AAKQSLKKKG LHVPPWRRAE YVKSKWLSSH VRVDQNSNGE VKQESVEVIA
301: ESVSSIVFGV
Arabidopsis Description
Protein of unknown function (DUF506) [Source:TAIR;Acc:AT2G38820]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.