CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG89812
KRG94975
KRH18664
KRH31638
KRH69070

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G77145.1	KRG89812	AT2G41090.1	17360592
AT1G77145.1	KRG94975	AT2G41090.1	17360592
AT1G77145.1	KRH18664	AT2G41090.1	17360592
AT1G77145.1	KRG89812	AT2G41100.1	17360592
AT1G77145.1	KRG94975	AT2G41100.1	17360592
AT1G77145.1	KRH18664	AT2G41100.1	17360592
AT1G77145.1	KRH31638	AT4G14640.1	17360592
AT1G77145.1	KRH69070	AT4G14640.1	17360592
AT1G77145.1	KRG89812	AT5G21274.1	17360592
AT1G77145.1	KRG94975	AT5G21274.1	17360592
AT1G77145.1	KRH18664	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH59552	Soybean	cytosol	90.57	88.24
VIT_04s0044g00970.t01	Wine grape	cytosol	53.21	52.03
GSMUA_Achr7P03040_001	Banana	nucleus	42.64	43.63
TraesCS3D01G404300.1	Wheat	nucleus	33.21	35.77
TraesCS3A01G409700.1	Wheat	cytosol	32.45	35.54
TraesCS3B01G442800.1	Wheat	cytosol	32.08	35.42
HORVU3Hr1G091440.2	Barley	cytosol	32.08	34.98
Zm00001d042631_P001	Maize	cytosol	27.17	33.8
OQU87982	Sorghum	cytosol	32.83	30.96
KRH37828	Soybean	cytosol	17.36	30.46
CDX88346	Canola	nucleus	29.06	29.96
CDX87538	Canola	nucleus	29.06	29.96
Bra015689.1-P	Field mustard	nucleus	29.06	29.96
CDX87539	Canola	nucleus	29.81	29.48
Bra015690.1-P	Field mustard	nucleus	29.81	29.48
Os01t0879600-00	Rice	plastid	33.58	29.47
CDX88345	Canola	nucleus	29.43	29.1
CDX88344	Canola	cytosol	28.3	28.3
CDX87540	Canola	cytosol	27.17	27.38
Bra015691.1-P	Field mustard	cytosol	27.17	27.38
AT1G77145.1	Thale cress	cytosol	26.04	26.54
AT1G77160.1	Thale cress	cytosol	26.04	26.24
KRH71351	Soybean	cytosol	33.21	24.51
KRH32089	Soybean	cytosol	29.43	23.01
KRG95606	Soybean	cytosol	31.32	22.99
KRH69065	Soybean	cytosol	31.32	22.68
KRH31637	Soybean	cytosol	32.45	22.45
KRH01670	Soybean	nucleus	25.66	22.08
KRH34359	Soybean	plastid	32.08	21.96
KRH70457	Soybean	cytosol	25.28	21.75
KRH77753	Soybean	cytosol	22.26	21.69
KRG92439	Soybean	plastid	31.32	21.12
KRH27801	Soybean	cytosol	21.89	21.09
KRH51155	Soybean	cytosol	23.4	20.88
KRH07392	Soybean	nucleus	23.4	20.74
KRH10888	Soybean	mitochondrion	22.64	20.0
KRH25597	Soybean	nucleus	21.51	19.86
KRH46613	Soybean	mitochondrion, nucleus	21.13	19.65
KRH50053	Soybean	mitochondrion	23.4	19.25
KRH11519	Soybean	mitochondrion	22.64	19.23
KRH21430	Soybean	mitochondrion, nucleus	21.89	19.21
KRH20449	Soybean	mitochondrion	23.4	18.84
KRH36535	Soybean	endoplasmic reticulum, golgi	23.4	18.45

Protein Annotations

EMBL:ACUP02004854	EnsemblPlants:KRH43403	EnsemblPlantsGene:GLYMA_08G147700	EntrezGene:100800694	InterPro:PDDEXK-like	PANTHER:PTHR31579
PANTHER:PTHR31579:SF10	PFAM:PF04720	ProteinID:KRH43403	ProteinID:KRH43403.1	SEG:seg	TIGRFAMs:TIGR01615
UniParc:UPI0002337F72	UniProt:I1KTG4	MapMan:35.2	:	:	:

Description

hypothetical protein

Coordinates

chr8:+:11263118..11264634

Molecular Weight (calculated)

29516.1 Da

IEP (calculated)

6.093

GRAVY (calculated)

-0.411

Length

265 amino acids

Sequence
(BLAST)

001: MASLEEDELV QMVQDFIESE STSPTSSTSS NCHTLNHRTQ YFILQDVLRS EGDTGCEAKV LKCVLNHMRG RKGAEKTKTS LSKWLVMRMK MDGLDASVCH
101: TSWATSLGCP AGEYEYIEVI IEDDQNCGKP TRLIVDIDFR SQFEVARPTQ NYKELTDSVP VILVGTENKL CKIISLLCSA AKQCLREKGL HVPPWRTASY
201: MQAKWLSVSR KEPSHDVIGY DDHEHADADI IGNWVPPSLK PKKRDLDGGG SGLSSQLSNM SVNCC

Best Arabidopsis Sequence Match ( AT1G77145.1 )
(BLAST)

001: MGSLGEEDLE KLVLDYIESP ITVSQHIESS TTALITLKEI LRAKGEKEKE MEEKIWSFIN GGRLSYEGDD EKRDVMNKIV SKLRSEGYDA SLSKTSWDSS
101: FDHREGCRVF RCSRKYEYID VMVKGDSNRD GVSKLKRVII DLDFKTQFEL ARQTEAYKDM TEMLPLVFVA TEGRLRRVVS LVCGEMKKSM KKEGMSRPPW
201: RTTRYMQSKW LPENRRRVSG CKKGSWSWSV FDDGSEGRGE ARTWTVSGSG PKTKCCFPIF

Arabidopsis Description

T14N5.3 protein [Source:UniProtKB/TrEMBL;Acc:O80651]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.