CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
EES01631
EES09201
EES16322
KXG37587
KXG37588
OQU78227

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G77145.1	EES01631	AT2G41090.1	17360592
AT1G77145.1	EES09201	AT2G41090.1	17360592
AT1G77145.1	EES16322	AT2G41090.1	17360592
AT1G77145.1	OQU78227	AT2G41090.1	17360592
AT1G77145.1	EES01631	AT2G41100.1	17360592
AT1G77145.1	EES09201	AT2G41100.1	17360592
AT1G77145.1	EES16322	AT2G41100.1	17360592
AT1G77145.1	OQU78227	AT2G41100.1	17360592
AT1G77145.1	KXG37587	AT4G14640.1	17360592
AT1G77145.1	KXG37588	AT4G14640.1	17360592
AT1G77145.1	EES01631	AT5G21274.1	17360592
AT1G77145.1	EES09201	AT5G21274.1	17360592
AT1G77145.1	EES16322	AT5G21274.1	17360592
AT1G77145.1	OQU78227	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d042631_P001	Maize	cytosol	55.16	72.77
TraesCS3A01G409700.1	Wheat	cytosol	53.38	61.98
TraesCS3D01G404300.1	Wheat	nucleus	53.38	60.98
TraesCS3B01G442800.1	Wheat	cytosol	51.96	60.83
HORVU3Hr1G091440.2	Barley	cytosol	52.31	60.49
Os01t0879600-00	Rice	plastid	57.65	53.64
GSMUA_Achr7P03040_001	Banana	nucleus	43.06	46.72
PGSC0003DMT400079089	Potato	cytosol	24.2	44.74
Solyc06g054640.1.1	Tomato	cytosol	27.76	35.14
VIT_04s0044g00970.t01	Wine grape	cytosol	32.38	33.58
KRH59552	Soybean	cytosol	32.38	33.46
VIT_18s0001g15610.t01	Wine grape	cytosol	32.38	32.97
KRH43403	Soybean	cytosol	30.96	32.83
AT1G77145.1	Thale cress	cytosol	24.56	26.54
CDX87538	Canola	nucleus	24.2	26.46
Bra015689.1-P	Field mustard	nucleus	24.2	26.46
AT1G77160.1	Thale cress	cytosol	24.2	25.86
CDX87539	Canola	nucleus	24.56	25.75
Bra015690.1-P	Field mustard	nucleus	24.56	25.75
CDX88346	Canola	nucleus	23.49	25.68
CDX88344	Canola	cytosol	24.2	25.66
CDX87540	Canola	cytosol	23.49	25.1
Bra015691.1-P	Field mustard	cytosol	23.49	25.1
CDX88345	Canola	nucleus	23.49	24.63
EES19824	Sorghum	cytosol	23.84	22.26
EER91615	Sorghum	mitochondrion	23.13	22.18
EES01469	Sorghum	nucleus	21.35	21.28
EES07354	Sorghum	cytosol	23.13	21.04
EES04096	Sorghum	cytosol	22.06	20.95
EER95459	Sorghum	plastid	22.06	20.74
EER93295	Sorghum	plastid	24.56	17.56
EER98072	Sorghum	cytosol, plastid	24.91	14.77

Protein Annotations

EnsemblPlants:OQU87982	EnsemblPlantsGene:SORBI_3003G376600	InterPro:PDDEXK-like	PANTHER:PTHR31579	PANTHER:PTHR31579:SF14	PFAM:PF04720
ProteinID:OQU87982	ProteinID:OQU87982.1	SEG:seg	TIGRFAMs:TIGR01615	UniParc:UPI0009DC8307	UniProt:A0A1W0W0U4
MapMan:35.2	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:69086652..69088729

Molecular Weight (calculated)

30879.8 Da

IEP (calculated)

9.409

GRAVY (calculated)

-0.425

Length

281 amino acids

Sequence
(BLAST)

001: MSSSDHSLLP SLEEVDECVF QMDSEPPSAP QAIAMHHRSP YHILQMDSEP PSAPQAIAMH HQSPYHILQG IVEPSTQVEI ELHERAMKHV REIGEERTKR
101: SSLKRRLMMR LRKDGYHASL CRSSWVATTE HPGGDYEYID VVVAGEHGAG AASSSSRLVV DIDFRSQFQL ARPAAWYAQL WARLPAVFVG PRAKLRKAVS
201: LLCAQAQRSL RESGLHVPPW RRSGYMQAKW LPGDVSTLHG GAPEVWSVAV SMAREPRGGA RRPGAGGLST ALSGSGSGGR R

Best Arabidopsis Sequence Match ( AT1G77145.1 )
(BLAST)

001: MGSLGEEDLE KLVLDYIESP ITVSQHIESS TTALITLKEI LRAKGEKEKE MEEKIWSFIN GGRLSYEGDD EKRDVMNKIV SKLRSEGYDA SLSKTSWDSS
101: FDHREGCRVF RCSRKYEYID VMVKGDSNRD GVSKLKRVII DLDFKTQFEL ARQTEAYKDM TEMLPLVFVA TEGRLRRVVS LVCGEMKKSM KKEGMSRPPW
201: RTTRYMQSKW LPENRRRVSG CKKGSWSWSV FDDGSEGRGE ARTWTVSGSG PKTKCCFPIF

Arabidopsis Description

T14N5.3 protein [Source:UniProtKB/TrEMBL;Acc:O80651]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.